EB
Edward S. Boyden
neuroscienceoptogeneticsbioengineeringBrainexpansion microscopyq-bio.NCNeuronsOptogeneticsLightMicroscopy
On Valency
published · living versionsW_n63g3kt7·v1 · currentpublished
Optogenetic Mimicry of the Transient Activation of Dopamine Neurons by Natural Reward Is Sufficient for Operant Reinforcement
with Kyung Man Kim, Michael V. Baratta, Aimei Yang, Doheon Lee +1
1 version
Preprints & journals
344 papers in the corpus · 2003–2026Isotropic shrinkage of patterned vacancies enables three-dimensional nanoprecise metastructures for visible light applications.42257226 · Yang, Quansan, Yang, Gaojie, Nambara, Takahiro et al.2026 · 2 citationsNature photonics. 2026;20(6):653-663
Target engagement of the subgenual anterior cingulate cortex with transcranial temporal interference stimulation in major depressive disorder: a protocol for a randomized sham-controlled trial.39268031 · Demchenko, Ilya, Rampersad, Sumientra, Datta, Abhishek et al.2026 · 21 citationsFrontiers in neuroscience. 2024;18:1390250
Self-amplifying RNA enables rapid, durable, integration-free programming of hiPSCs.42748925 · Della Santina, Catherine M, Ploessl, Deon S, Lindsay-Mosher, Nicole et al.2026 · 0 citationsCell reports methods. 2026:101602
Human brain organoids record the passage of time over multiple years.42618795 · Faravelli, Irene, Antón-Bolaños, Noelia, Wei, Anqi et al.2026 · 3 citationsNature. 2026;657(8132):713-723
Voltage imaging of neurons distributed across entire brains of larval zebrafish.42601458 · Wang, Zeguan, Zhang, Jie, Symvoulidis, Panagiotis et al.2026 · 0 citationsNature methods. 2026;23(9):1895-1907
Thousandfold Expansion Microscopy.42282583 · Hu, Helena, Krah, Donatus, Ntolkeras, Antonios et al.2026 · 4 citationsbioRxiv : the preprint server for biology. 2026
Proceedings of the Sixth Deep Brain Stimulation Think Tank Modulation of Brain Networks and Application of Advanced Neuroimaging, Neurophysiology, and Optogenetics.31572109 · Ramirez-Zamora, Adolfo, Giordano, James, Boyden, Edward S et al.2026 · 37 citationsFrontiers in neuroscience. 2019;13:936
Principles of in situ protein sequencing: expansion microscopy-adapted Edman degradation and amino acid recognition10.64898/2026.01.29.702630v2 · Mitchell-Wang, C. M., Tavana, S. Z., Peng, J. et al.2026 · 4 citationsbioRxiv
Expansion Revealing of Pathology Resolves Nanostructures Associated with Inflammatory Phenotypes in COVID-19 Decedent Human Brain Tissue10.64898/2026.05.14.725177v1 · Stanton, A. E., Kang, J., Blanchard, J. W. et al.2026 · 0 citationsbioRxiv
Author Correction: A multi-modal single-cell and spatial expression map of metastatic breast cancer biopsies across clinicopathological features.40155562 · Klughammer, Johanna, Abravanel, Daniel L, Segerstolpe, Åsa et al.2026 · 1 citationNature medicine. 2025;31(5):1713
Scalable and multiplexed recorders of gene regulation dynamics across weeks.41588170 · Zheng, Lirong, Shi, Dongqing, Yan, Yixiao et al.2026 · 4 citationsNature. 2026;652(8111):1038-1048
Unified Transcriptome and Mechanics Map of the Intact Mammalian Preimplantation Embryo In Situ10.64898/2026.02.23.706394v1 · Habibi, E., Sinha, A., Yang, H. et al.2026 · 1 citationbioRxiv
QuATON: Quantization Aware Training of Optical Neurons.38585742 · Kariyawasam, Hasindu, Hettiarachchi, Ramith, Yang, Quansan et al.2026 · 2 citationsResearch square. 2024
Fast light-field 3D microscopy with out-of-distribution detection and adaptation through conditional normalizing flows.38404325 · Page Vizcaíno, Josué, Symvoulidis, Panagiotis, Wang, Zeguan et al.2026 · 4 citationsBiomedical optics express. 2024;15(2):1219-1232
Library transgenesis in zebrafish through delayed site-specific mosaic integration for in vivo pooled screening of transgenes10.64898/2026.01.30.702415v1 · Bracha, S., Amsterdam, A., Xu, Y. et al.2026 · 1 citationbioRxiv
Screening channelrhodopsins using robotic intracellular electrophysiology and single cell sequencing.41421605 · Ehrlich, Samuel, VandeLoo, Alexandra D, Badawy, Mohamed et al.2026 · 0 citationsJournal of neuroscience methods. 2026;428:110663
A transcriptomic atlas of astrocyte heterogeneity across space and time in mouse and marmoset.41270736 · Schroeder, Margaret E, McCormack, Dana M, Metzner, Lukas R et al.2025 · 23 citationsNeuron. 2025;113(23):3942-3965.e19
Publisher Correction: Non-invasive temporal interference electrical stimulation of the human hippocampus.37957321 · Violante, Ines R, Alania, Ketevan, Cassarà, Antonino M et al.2025 · 3 citationsNature neuroscience. 2023;26(12):2252
Human applications of transcranial temporal interference stimulation: A systematic review.41167554 · Demchenko, Ilya, Tailor, Ishaan, Chegini, Sina et al.2025 · 8 citationsBrain stimulation. 2025;18(6):2054-2066
ConnectomeBench: Can LLMs Proofread the Connectome?2511.05542v1 · Jeff Brown, Andrew Kirjner, Annika Vivekananthan et al.2025 · 0 citationsarXiv
Gamma sensory stimulation in mild Alzheimer's dementia: An open-label extension study.41137616 · Chan, Diane, de Weck, Gabrielle, Jackson, Brennan L et al.2025 · 20 citationsAlzheimer's & dementia : the journal of the Alzheimer's Association. 2025;21(10):e70792
Self-amplifying RNA enables rapid, durable, integration-free programming of hiPSCs10.1101/2025.10.24.684179v1 · Della Santina, C. M., Ploessl, D. S., Lindsay-Mosher, N. et al.2025 · 1 citationbioRxiv
Human brain organoids record the passage of time over multiple years in culture10.1101/2025.10.01.679721v1 · Faravelli, I., Anton-Bolanos, N., Wei, A. et al.2025 · 11 citationsbioRxiv
Designing proteins with reduced T-cell epitopes through policy optimization10.1101/2025.09.27.678937v1 · Ponnapati, M., Sinha, S., Lynch, B. A. et al.2025 · 0 citationsbioRxiv
Combinatorial protein barcodes enable self-correcting neuron tracing with nanoscale molecular context10.1101/2025.09.26.678648v1 · Park, S. Y., Sheridan, A., An, B. et al.2025 · 6 citationsbioRxiv
Human Applications of Transcranial Temporal Interference Stimulation: A Systematic Review10.1101/2025.05.16.25327804v4 · Demchenko, I., Tailor, I., Chegini, S. et al.2025 · 14 citationsmedRxiv
One-step nanoscale expansion microscopy reveals individual protein shapes.39385007 · Shaib, Ali H, Chouaib, Abed Alrahman, Chowdhury, Rajdeep et al.2025 · 64 citationsNature biotechnology. 2025;43(9):1539-1547
Screening channelrhodopsins using robotic intracellularelectrophysiology and single cell sequencing10.1101/2025.08.19.671087v1 · Ehrlich, S. M., VandeLoo, A. D., Badawy, M. et al.2025 · 0 citationsbioRxiv
Expansion in situ genome sequencing links nuclear abnormalities to aberrant chromatin regulation.40440430 · Labade, Ajay S, Chiang, Zachary D, Comenho, Caroline et al.2025 · 13 citationsScience (New York, N.Y.). 2025;389(6758):eadt2781
Astrocyte regional specialization is shaped by postnatal development10.1101/2024.10.11.617802v3 · Schroeder, M. E., McCormack, D. M., Metzner, L. et al.2024 · 9 citationsbioRxiv
Wide-field three-photon excitation in biological samples.29152380 · Rowlands, Christopher J, Park, Demian, Bruns, Oliver T et al.2025 · 81 citationsLight, science & applications. 2017;6:e16255
Voices in methods development.31562479 · Anikeeva, Polina, Boyden, Edward, Brangwynne, Clifford et al.2025 · 7 citationsNature methods. 2019;16(10):945-951
Prosthetic systems for therapeutic optical activation and silencing of genetically-targeted neurons.18458792 · Bernstein, Jacob G, Han, Xue, Henninger, Michael A et al.2025 · 74 citationsProceedings of SPIE--the International Society for Optical Engineering. 2008;6854:68540H
Homogenized $\textit{C. elegans}$ Neural Activity and Connectivity Data2411.12091v4 · Quilee Simeon, Anshul Kashyap, Konrad P Kording et al.2024 · 0 citationsarXiv
A neural correlate of individual odor preference in Drosophila.40067954 · Churgin, Matthew A, Lavrentovich, Danylo O, Smith, Matthew A-Y et al.2025 · 11 citationseLife. 2025;12
Multiplexed, scalable analog recording of gene regulation dynamics over weeks using intracellular protein tapes10.1101/2025.05.10.653182v1 · Zheng, L., Yan, Y., Zhou, B. et al.2025 · 1 citationbioRxiv
Engineering of Genetically Encoded Bright Near-Infrared Fluorescent Voltage Indicator.40003908 · Xiao, Xian, Yang, Aimei, Zhang, Hanbin et al.2025 · 7 citationsInternational journal of molecular sciences. 2025;26(4)
Dense, continuous membrane labeling and expansion microscopy visualization of ultrastructure in tissues.39939319 · Shin, Tay Won, Wang, Hao, Zhang, Chi et al.2025 · 19 citationsNature communications. 2025;16(1):1579
Multisensory gamma stimulation enhances adult neurogenesis and improves cognitive function in male mice with Down Syndrome.40273201 · Islam, Md Rezaul, Jackson, Brennan, Naomi, Maeesha Tasnim et al.2025 · 7 citationsPloS one. 2025;20(4):e0317428
Nanoscale Resolution Imaging of Whole Mouse Embryos Using Expansion Microscopy.39964913 · Sim, Jueun, Park, Chan E, Cho, In et al.2025 · 17 citationsACS nano. 2025;19(8):7910-7927
Innovations in aging biology: highlights from the ARDD emerging science & technologies workshop.39966395 · Unfried, Maximilian, Schmauck-Medina, Tomas, Amin, Neal D et al.2025 · 2 citationsnpj aging. 2025;11(1):8
Multisensory gamma stimulation enhances adult neurogenesis and improvescognitive function in male mice with Down Syndrome10.1101/2024.10.03.616486v2 · Islam, M. R., Jackson, B., Naomi, M. T. et al.2024 · 1 citationbioRxiv
Author Correction: Gamma frequency entrainment attenuates amyloid load and modifies microglia.39592835 · Iaccarino, Hunter F, Singer, Annabelle C, Martorell, Anthony J et al.2024 · 2 citationsNature. 2024;636(8042):E2
Author Correction: Gamma frequency entrainment attenuates amyloid load and modifies microglia.30046102 · Iaccarino, Hunter F, Singer, Annabelle C, Martorell, Anthony J et al.2024 · 31 citationsNature. 2018;562(7725):E1
A neural correlate of individual odor preference in Drosophila10.1101/2021.12.24.474127v4 · Churgin, M., Lavrentovich, D., Smith, M. A.-Y. et al.2021 · 13 citationsbioRxiv
High-throughput expansion microscopy enables scalable super-resolution imaging.39589396 · Day, John H, Della Santina, Catherine M, Maretich, Pema et al.2024 · 6 citationseLife. 2024;13
A fast and responsive voltage indicator with enhanced sensitivity for unitary synaptic events.39305894 · Hao, Yukun A, Lee, Sungmoo, Roth, Richard H et al.2024 · 62 citationsNeuron. 2024;112(22):3680-3696.e8
Patch-walking, a coordinated multi-pipette patch clamp for efficiently finding synaptic connections.39556439 · Yip, Mighten C, Gonzalez, Mercedes M, Lewallen, Colby F et al.2024 · 3 citationseLife. 2024;13
A multi-modal single-cell and spatial expression map of metastatic breast cancer biopsies across clinicopathological features.39478111 · Klughammer, Johanna, Abravanel, Daniel L, Segerstolpe, Åsa et al.2024 · 106 citationsNature medicine. 2024;30(11):3236-3249
Multiplexed expansion revealing for imaging multiprotein nanostructures in healthy and diseased brain.39521775 · Kang, Jinyoung, Schroeder, Margaret E, Lee, Youngmi et al.2024 · 19 citationsNature communications. 2024;15(1):9722
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