MR
Mauricio Reyes
cs.CVAlgorithmseess.IVdeep learningImage Processing, Computer-AssistedBrain NeoplasmsMagnetic Resonance ImagingMRIDeep Learningcs.LG
On Valency
published · living versionsW_qx9ebef5·v1 · currentpublished
Meta-CLIP: Metadata-Conditioned Contrastive Learning for Zero-Shot Disease Inference
with Haozhe Luo, Nirosh Sivanesan, Shelley Zixin Shu, Francesco Nitti
1 version
W_ctyr365s·v1published
Preprints & journals
175 papers in the corpus · 2005–2026Comprehensive performance testing and external validation of an AI algorithm to detect and segment brain metastases.42421219 · Kotecha, Rupesh, Akdemir, Eyub Y, Din, Naseem Ud et al.2026 · 0 citationsNeuro-oncology. 2026;28(10):2449-2460
INFORMER-Interpretability-Founded Monitoring of Medical Image Deep Learning Models: Application to Chest X-ray Pathologies.42745109 · Shu, Shelley Zixin, Pahud de Mortanges, Aurélie, Poellinger, Alexander et al.2026 · 0 citationsJournal of imaging informatics in medicine. 2026
Mind the gap: challenges and future directions for content-based image retrieval in clinical radiology.42222138 · Spada, Erika, Erb-Eigner, Katharina, Pahud de Mortanges, Aurélie et al.2026 · 0 citationsFrontiers in radiology. 2026;6:1810708
Disentangled generative uncertainty-aware multi-modal diffusion segmentation of medical images.42096954 · Mahapatra, Dwarikanath, Roy, Sudipta, Reyes, Mauricio2026 · 0 citationsMedical image analysis. 2026;112:104122
Assessing the robustness and clinical evaluation of a deep-learning segmentation model for head and neck cancer.41768244 · Schanne, Daniel H, Cuenot, Léandre, Brüningk, Sarah et al.2026 · 0 citationsFrontiers in oncology. 2026;16:1731007
A dual-layer quality assurance approach leveraging dose prediction for efficient review of automated contours of organs at risk in the brain in radiotherapy.41492344 · Poel, Robert, Kamath, Amith, Ermiş, Ekin et al.2026 · 1 citationPhysics and imaging in radiation oncology. 2025;36:100888
Evaluation of compartmentalized automatic segmentation for definition of the GTV in glioblastoma radiotherapy.41308924 · Poel, Robert, Mose, Lucas, Reinhardt, Philipp et al.2025 · 1 citationRadiotherapy and oncology : journal of the European Society for Therapeutic Radiology and Oncology. 2026;214:111308
MG-NECOLA: Fast Neural Emulators for Modified Gravity Cosmologies2510.20086v1 · J. Bayron Orjuela-Quintana, Mauricio Reyes, Elena Giusarma et al.2025 · 0 citationsarXiv
XBench: A Comprehensive Benchmark for Visual-Language Explanations in Chest Radiography2510.19599v1 · Haozhe Luo, Shelley Zixin Shu, Ziyu Zhou et al.2025 · 2 citationsarXiv
The impact of U-Net architecture choices and skip connections on the robustness of segmentation across texture variations.40945214 · Kamath, Amith, Willmann, Jonas, Andratschke, Nicolaus et al.2025 · 10 citationsComputers in biology and medicine. 2025;197(Pt B):111056
Spatial tumour characteristics as an indirect marker of metabolic dysregulation: evaluation for non-invasive IDH-genotyping of glioma using hybrid [18 F]FET-PET/MRI.40866645 · Lohmeier, Johannes, Meinhardt, Jenny, Radbruch, Helena et al.2026 · 1 citationEuropean journal of nuclear medicine and molecular imaging. 2026;53(3):1939-1950
DeepISLES: a clinically validated ischemic stroke segmentation model from the ISLES'22 challenge.40783484 · de la Rosa, Ezequiel, Reyes, Mauricio, Liew, Sook-Lei et al.2025 · 23 citationsNature communications. 2025;16(1):7357
AUDIT: An open-source Python library for AI model evaluation with use cases in MRI brain tumor segmentation.40795618 · Aumente-Maestro, Carlos, Müller, Michael, Remeseiro, Beatriz et al.2025 · 2 citationsComputer methods and programs in biomedicine. 2025;271:108991
Explainable AI in medicine: challenges of integrating XAI into the future clinical routine.40896521 · Räz, Tim, Pahud De Mortanges, Aurélie, Reyes, Mauricio2025 · 36 citationsFrontiers in radiology. 2025;5:1627169
A comprehensive multifaceted technical evaluation framework for implementation of auto-segmentation models in radiotherapy.40745381 · Poel, Robert, Rüfenacht, Elias, Scheib, Stefan et al.2025 · 11 citationsCommunications medicine. 2025;5(1):319
Predicting the impact of target volume contouring variations on the organ at risk dose: results of a qualitative survey.40581214 · Willmann, Jonas, Kamath, Amith, Poel, Robert et al.2025 · 3 citationsRadiotherapy and oncology : journal of the European Society for Therapeutic Radiology and Oncology. 2025;210:110999
On the Interplay of Human-AI Alignment,Fairness, and Performance Trade-offs in Medical Imaging2505.10231v1 · Haozhe Luo, Ziyu Zhou, Zixin Shu et al.2025 · 2 citationsarXiv
ROXSI: Robust Cross-Sequence Semantic Interaction for Brain Tumor Segmentation on Multi-Sequence MR Images.40030420 · Kuang, Zhuo, Yan, Zengqiang, Abayazeed, Aly et al.2025 · 4 citationsIEEE journal of biomedical and health informatics. 2025;29(4):2899-2910
Corrections to "Multi-Label Generalized Zero Shot Chest X-Ray Classification By Combining Image-Text Information With Feature Disentanglement".40178968 · Mahapatra, Dwarikanath, Jimeno Yepes, Antonio, Bozorgtabar, Behzad et al.2025 · 0 citationsIEEE transactions on medical imaging. 2025;44(4):1984-1985
In the Picture: Medical Imaging Datasets, Artifacts, and their Living Review2501.10727v2 · Amelia Jim'enez-S'anchez, Natalia-Rozalia Avlona, Sarah de Boer et al.2025 · 17 citationsarXiv
Multi-Label Generalized Zero Shot Chest X-Ray Classification by Combining Image-Text Information With Feature Disentanglement.39018216 · Mahapatra, Dwarikanath, Jimeno Yepes, Antonio, Bozorgtabar, Behzad et al.2025 · 17 citationsIEEE transactions on medical imaging. 2025;44(1):31-43
MedShapeNet - a large-scale dataset of 3D medical shapes for computer vision.39733351 · Li, Jianning, Zhou, Zongwei, Yang, Jiancheng et al.2025 · 47 citationsBiomedizinische Technik. Biomedical engineering. 2025;70(1):71-90
DreamOn: a data augmentation strategy to narrow the robustness gap between expert radiologists and deep learning classifiers.39758512 · Lerch, Luc, Huber, Lukas S, Kamath, Amith et al.2025 · 5 citationsFrontiers in radiology. 2024;4:1420545
Prior knowledge-guided vision-transformer-based unsupervised domain adaptation for intubation prediction in lung disease at one week.39515190 · Yang, Junlin, Henao, John Anderson Garcia, Dvornek, Nicha et al.2024 · 5 citationsComputerized medical imaging and graphics : the official journal of the Computerized Medical Imaging Society. 2024;118:102442
ISLES'24: Final Infarct Prediction with Multimodal Imaging and Clinical Data. Where Do We Stand?2408.10966v2 · Ezequiel de la Rosa, Ruisheng Su, Mauricio Reyes et al.2024 · 4 citationsarXiv
Orchestrating explainable artificial intelligence for multimodal and longitudinal data in medical imaging.39039248 · Pahud de Mortanges, Aurélie, Luo, Haozhe, Shu, Shelley Zixin et al.2026 · 92 citationsNPJ digital medicine. 2024;7(1):195
ALFREDO: Active Learning with FeatuRe disEntangelement and DOmain adaptation for medical image classification.39018722 · Mahapatra, Dwarikanath, Tennakoon, Ruwan, George, Yasmeen et al.2024 · 16 citationsMedical image analysis. 2024;97:103261
DWARF: Disease-weighted network for attention map refinement2406.17032v2 · Haozhe Luo, Aur'elie Pahud de Mortanges, Oana Inel et al.2024 · 3 citationsarXiv
Understanding metric-related pitfalls in image analysis validation.36945687 · Reinke, Annika, Tizabi, Minu D, Baumgartner, Michael et al.2025 · 233 citationsArXiv. 2024
Metrics reloaded: recommendations for image analysis validation.38347141 · Maier-Hein, Lena, Reinke, Annika, Godau, Patrick et al.2024 · 539 citationsNature methods. 2024;21(2):195-212
GANDALF: Graph-based transformer and Data Augmentation Active Learning Framework with interpretable features for multi-label chest Xray classification.38199069 · Mahapatra, Dwarikanath, Bozorgtabar, Behzad, Ge, Zongyuan et al.2024 · 19 citationsMedical image analysis. 2024;93:103075
Current and Evolving Multimodality Cardiac Imaging in Managing Transthyretin Amyloid Cardiomyopathy.38099914 · Alwan, Louhai, Benz, Dominik C, Cuddy, Sarah A M et al.2024 · 37 citationsJACC. Cardiovascular imaging. 2024;17(2):195-211
SaRF: Saliency regularized feature learning improves MRI sequence classification.37866127 · You, Suhang, Wiest, Roland, Reyes, Mauricio2023 · 5 citationsComputer methods and programs in biomedicine. 2024;243:107867
Evaluating automated longitudinal tumor measurements for glioblastoma response assessment.37745204 · Suter, Yannick, Notter, Michelle, Meier, Raphael et al.2023 · 9 citationsFrontiers in radiology. 2023;3:1211859
Saliency-Enhanced Content-Based Image Retrieval for Diagnosis Support in Dermatology Consultation: Reader Study.37616039 · Gassner, Mathias, Barranco Garcia, Javier, Tanadini-Lang, Stephanie et al.2023 · 14 citationsJMIR dermatology. 2023;6:e42129
Deep-Learning-Based Dose Predictor for Glioblastoma-Assessing the Sensitivity and Robustness for Dose Awareness in Contouring.37686501 · Poel, Robert, Kamath, Amith J, Willmann, Jonas et al.2024 · 11 citationsCancers. 2023;15(17)
A Multiclass Radiomics Method-Based WHO Severity Scale for Improving COVID-19 Patient Assessment and Disease Characterization From CT Scans.37493348 · Henao, John Anderson Garcia, Depotter, Arno, Bower, Danielle V et al.2023 · 5 citationsInvestigative radiology. 2023;58(12):882-893
ASTRA: Atomic Surface Transformations for Radiotherapy Quality Assurance.38082788 · Kamath, Amith, Poel, Robert, Willmann, Jonas et al.2023 · 4 citationsAnnual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference. 2023;2023:1-4
A comprehensive dataset of annotated brain metastasis MR images with clinical and radiomic data.37059722 · Ocaña-Tienda, Beatriz, Pérez-Beteta, Julián, Villanueva-García, José D et al.2023 · 44 citationsScientific data. 2023;10(1):208
Graph Node Based Interpretability Guided Sample Selection for Active Learning.36240033 · Mahapatra, Dwarikanath, Poellinger, Alexander, Reyes, Mauricio2023 · 18 citationsIEEE transactions on medical imaging. 2023;42(3):661-673
PyRaDiSe: A Python package for DICOM-RT-based auto-segmentation pipeline construction and DICOM-RT data conversion.36738608 · Rüfenacht, Elias, Kamath, Amith, Suter, Yannick et al.2023 · 13 citationsComputer methods and programs in biomedicine. 2023;231:107374
Author Correction: Federated learning enables big data for rare cancer boundary detection.36702828 · Pati, Sarthak, Baid, Ujjwal, Edwards, Brandon et al.2025 · 5 citationsNature communications. 2023;14(1):436
Author Correction: Computer-aided diagnosis through medical image retrieval in radiology.36702842 · Silva, Wilson, Gonçalves, Tiago, Härmä, Kirsi et al.2023 · 1 citationScientific reports. 2023;13(1):1470
NS-HGlio: A generalizable and repeatable HGG segmentation and volumetric measurement AI algorithm for the longitudinal MRI assessment to inform RANO in trials and clinics.36685009 · Abayazeed, Aly H, Abbassy, Ahmed, Müeller, Michael et al.2023 · 34 citationsNeuro-oncology advances. 2023;5(1):vdac184
The LUMIERE dataset: Longitudinal Glioblastoma MRI with expert RANO evaluation.36522344 · Suter, Yannick, Knecht, Urspeter, Valenzuela, Waldo et al.2023 · 62 citationsScientific data. 2022;9(1):768
Federated learning enables big data for rare cancer boundary detection.36470898 · Pati, Sarthak, Baid, Ujjwal, Edwards, Brandon et al.2022 · 390 citationsNature communications. 2022;13(1):7346
Computer-aided diagnosis through medical image retrieval in radiology.36456605 · Silva, Wilson, Gonçalves, Tiago, Härmä, Kirsi et al.2022 · 30 citationsScientific reports. 2022;12(1):20732
Influence of contrast and texture based image modifications on the performance and attention shift of U-Net models for brain tissue segmentation.37555149 · You, Suhang, Reyes, Mauricio2023 · 7 citationsFrontiers in neuroimaging. 2022;1:1012639
Impact of random outliers in auto-segmented targets on radiotherapy treatment plans for glioblastoma.36273161 · Poel, Robert, Rüfenacht, Elias, Ermis, Ekin et al.2022 · 7 citationsRadiation oncology (London, England). 2022;17(1):170
Reliable brain morphometry from contrast-enhanced T1w-MRI in patients with multiple sclerosis.36250711 · Rebsamen, Michael, McKinley, Richard, Radojewski, Piotr et al.2023 · 23 citationsHuman brain mapping. 2023;44(3):970-979
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