HS
Hanno Scharr
cs.CVcs.LGcs.AIeess.IVq-bio.QMbioinformaticsimage processingplant phenotypingAlgorithmsArabidopsis
On Valency
published · living versionsW_re26p2ps·v1 · currentpublished
Practical Assessment of Agentic Systems in Acoustics
with Arne Hildenbrand, Philipp Diel, Zhuo Cao, Stefan Pischinger +1
1 version
W_v829ykkq·v1published
Preprints & journals
59 papers in the corpus · 2003–2026SciFusion: Physics-Guided Compositional Diffusion for Multimodal 3D Scientific Image Generation2610.30313v1 · Luoxi Wang, Alessio Quercia, Hanno Scharr et al.2026 · 0 citationsarXiv
AgriCountDINO: Parameter-Efficient Exemplar-Guided Counting and Localization in Agriculture2609.29460v1 · Shengjie Guo, Xin Li, Borjana Arsova et al.2026 · 0 citationsarXiv
Using Channel Representations in Regularization Terms: A Case Study on Image Diffusion2608.29227v1 · Christian Heinemann, Freddie \AAstrom, George Baravdish et al.2026 · 2 citationsProceedings of the 9th International Conference on Computer Vision Theory and Applications (VISAPP 2014), vol. 2, pp. 48-55, SciTePress, 2014
RECAST: Model Reconstruction via Counterfactual-Aware Wasserstein Geometry under Limited Data2606.27948v1 · Xuan Zhao, Lena Krieger, Zhuo Cao et al.2026 · 0 citationsarXiv
Residual-Space Evolutionary Optimization via Flow-based Generative Models2606.20084v1 · Zhuo Cao, Lena Krieger, Fernanda Nader et al.2026 · 0 citationsarXiv
DART: A design-aware microfluidic chip paradigm for real-time live-cell image analysis2606.18523v1 · Johannes Seiffarth, Matthias Pesch, Lukas Scholtes et al.2026 · 0 citationsarXiv
Counterfactual Transport Flows for Offline Conservative Trajectory Refinement2606.09115v1 · Lena Krieger, Xuan Zhao, Zhuo Cao et al.2026 · 0 citationsarXiv
Higher-Order Hit-&-Run Samplers for Linearly Constrained Densities2602.14616v2 · Richard D. Paul, Anton Stratmann, Johann F. Jadebeck et al.2026 · 0 citationsarXiv
Least but not Last: Fine-tuning Intermediate Principal Components for Better Performance-Forgetting Trade-Offs2602.03493v2 · Alessio Quercia, Arya Bangun, Ira Assent et al.2026 · 0 citationsarXiv
Physics-Guided Diffusion Priors for Multi-Slice Reconstruction in Scientific Imaging2512.06977v1 · Laurentius Valdy, Richard D. Paul, Alessio Quercia et al.2025 · 0 citationsarXiv
LeapFactual: Reliable Visual Counterfactual Explanation Using Conditional Flow Matching2510.14623v3 · Zhuo Cao, Xuan Zhao, Lena Krieger et al.2025 · 0 citationsarXiv
Galaxy Morphology Classification with Counterfactual Explanation2510.14655v1 · Zhuo Cao, Lena Krieger, Hanno Scharr et al.2025 · 0 citationsarXiv
EAP4EMSIG -- Enhancing Event-Driven Microscopy for Microfluidic Single-Cell Analysis2504.00047v2 · Nils Friederich, Angelo Jovin Yamachui Sitcheu, Annika Nassal et al.2025 · 0 citationsarXiv
Efficient Epistemic Uncertainty Estimation in Cerebrovascular Segmentation2503.22271v1 · Omini Rathore, Richard Paul, Abigail Morrison et al.2025 · 0 citationsarXiv
VRoot: A VR-Based application for manual root system architecture reconstruction.41415185 · Baker, Dirk N, Selzner, Tobias, Göbbert, Jens Henrik et al.2025 · 4 citationsPlant phenomics (Washington, D.C.). 2025;7(2):100013
Self-Supervised Learning Based on Transformed Image Reconstruction for Equivariance-Coherent Feature Representation2503.18753v2 · Qin Wang, Alessio Quercia, Benjamin Bruns et al.2025 · 1 citationarXiv
How To Make Your Cell Tracker Say "I dunno!"2503.09244v1 · Richard D. Paul, Johannes Seiffarth, David Rugamer et al.2025 · 0 citationsarXiv
1LoRA: Summation Compression for Very Low-Rank Adaptation2503.08333v1 · Alessio Quercia, Zhuo Cao, Arya Bangun et al.2025 · 0 citationsarXiv
Untrained perceptual loss for image denoising of line-like structures in MR images.40009630 · Pfaehler, Elisabeth, Pflugfelder, Daniel, Scharr, Hanno2025 · 4 citationsPloS one. 2025;20(2):e0318992
Virtual World Coupling with Photosynthesis Evaluation for Synthetic Data Production10.1101/2025.02.06.633870v1 · Baker, D. N., Giraud, M., Goebbert, J. H. et al.2025 · 0 citationsbioRxiv
Enhancing Monocular Depth Estimation with Multi-Source Auxiliary Tasks2501.12824v1 · Alessio Quercia, Erenus Yildiz, Zhuo Cao et al.2025 · 2 citationsWACV 2025
MRI Reconstruction with Regularized 3D Diffusion Model (R3DM)2412.18723v1 · Arya Bangun, Zhuo Cao, Alessio Quercia et al.2024 · 6 citationsarXiv
Equivariant Representation Learning for Augmentation-based Self-Supervised Learning via Image Reconstruction2412.03314v1 · Qin Wang, Kai Krajsek, Hanno Scharr2024 · 0 citationsarXiv
Retrieval of sun-induced plant fluorescence in the O-A absorption band from DESIS imagery2411.08925v1 · Jim Buffat, Miguel Pato, Kevin Alonso et al.2024 · 1 citationarXiv
EAP4EMSIG -- Experiment Automation Pipeline for Event-Driven Microscopy to Smart Microfluidic Single-Cells Analysis2411.05030v1 · Nils Friederich, Angelo Jovin Yamachui Sitcheu, Annika Nassal et al.2024 · 1 citationarXiv
Tracking one-in-a-million: Large-scale benchmark for microbial single-cell tracking with experiment-aware robustness metrics2411.00552v1 · J. Seiffarth, L. Blobaum, R. D. Paul et al.2024 · 3 citationsarXiv
Robust Approximate Characterization of Single-Cell Heterogeneity in Microbial Growth2408.04501v1 · Richard D. Paul, Johannes Seiffarth, Hanno Scharr et al.2024 · 1 citationarXiv
Editorial: Computer vision in plant phenotyping and agriculture.37261332 · Stavness, Ian, Giuffrida, Valerio, Scharr, Hanno2023 · 8 citationsFrontiers in artificial intelligence. 2023;6:1187301
Smuggling on the Nanoscale-Fusogenic Liposomes Enable Efficient RNA-Transfer with Negligible Immune Response In Vitro and In Vivo.37111695 · Hoffmann, Marco, Gerlach, Sven, Takamiya, Masanari et al.2023 · 11 citationsPharmaceutics. 2023;15(4)
microbeSEG: A deep learning software tool with OMERO data management for efficient and accurate cell segmentation.36445903 · Scherr, Tim, Seiffarth, Johannes, Wollenhaupt, Bastian et al.2022 · 12 citationsPloS one. 2022;17(11):e0277601
ObiWan-Microbi: OMERO-based integrated workflow for annotating microbes in the cloud10.1101/2022.08.01.502297v1 · Seiffarth, J., Scherr, T., Wollenhaupt, B. et al.2022 · 14 citationsbioRxiv
Towards Large-Scale Rendering of Simulated Crops for Synthetic Ground Truth Generation on Modular Supercomputers2110.14946v1 · Dirk Norbert Helmrich, Jens Henrik Gobbert, Mona Giraud et al.2021 · 1 citationarXiv
The platform GrowScreen-Agar enables identification of phenotypic diversity in root and shoot growth traits of agar grown plants.32582364 · Nagel, Kerstin A, Lenz, Henning, Kastenholz, Bernd et al.2024 · 39 citationsPlant methods. 2020;16:89
Practically Lossless Affine Image Transformation.32224458 · Pflugfelder, Daniel, Scharr, Hanno2024 · 12 citationsIEEE transactions on image processing : a publication of the IEEE Signal Processing Society. 2020
Sharing the Right Data Right: A Symbiosis with Machine Learning.30497879 · Tsaftaris, Sotirios A, Scharr, Hanno2020 · 32 citationsTrends in plant science. 2019;24(2):99-102
Citizen crowds and experts: observer variability in image-based plant phenotyping.29449872 · Giuffrida, M Valerio, Chen, Feng, Scharr, Hanno et al.2024 · 39 citationsPlant methods. 2018;14:12
Fast High Resolution Volume Carving for 3D Plant Shoot Reconstruction.29033961 · Scharr, Hanno, Briese, Christoph, Embgenbroich, Patrick et al.2020 · 33 citationsFrontiers in plant science. 2017;8:1680
ARIGAN: Synthetic Arabidopsis Plants using Generative Adversarial Network1709.00938v1 · Mario Valerio Giuffrida, Hanno Scharr, Sotirios A Tsaftaris2017 · 114 citationsarXiv
Machine Learning for Plant Phenotyping Needs Image Processing.27810146 · Tsaftaris, Sotirios A, Minervini, Massimo, Scharr, Hanno2018 · 171 citationsTrends in plant science. 2016;21(12):989-991
phenoSeeder - A Robot System for Automated Handling and Phenotyping of Individual Seeds.27663410 · Jahnke, Siegfried, Roussel, Johanna, Hombach, Thomas et al.2017 · 87 citationsPlant physiology. 2016;172(3):1358-1370
3D Surface Reconstruction of Plant Seeds by Volume Carving: Performance and Accuracies.27375628 · Roussel, Johanna, Geiger, Felix, Fischbach, Andreas et al.2016 · 40 citationsFrontiers in plant science. 2016;7:745
Growth Signatures of Rosette Plants from Time-Lapse Video.26684463 · Dellen, Babette, Scharr, Hanno, Torras, Carme2016 · 47 citationsIEEE/ACM transactions on computational biology and bioinformatics. 2015;12(6):1470-8
phenoVein-A Tool for Leaf Vein Segmentation and Analysis.26468519 · Bühler, Jonas, Rishmawi, Louai, Pflugfelder, Daniel et al.2016 · 57 citationsPlant physiology. 2015;169(4):2359-70
The significance of image compression in plant phenotyping applications.32480737 · Minervini, Massimo, Scharr, Hanno, Tsaftaris, Sotirios A2020 · 10 citationsFunctional plant biology : FPB. 2015;42(10):971-988
The leaf angle distribution of natural plant populations: assessing the canopy with a novel software tool.25774205 · Müller-Linow, Mark, Pinto-Espinosa, Francisco, Scharr, Hanno et al.2015 · 108 citationsPlant methods. 2015;11:11
HyperART: non-invasive quantification of leaf traits using hyperspectral absorption-reflectance-transmittance imaging.25649124 · Bergsträsser, Sergej, Fanourakis, Dimitrios, Schmittgen, Simone et al.2015 · 209 citationsPlant methods. 2015;11(1):1
GROWSCREEN-Rhizo is a novel phenotyping robot enabling simultaneous measurements of root and shoot growth for plants grown in soil-filled rhizotrons.32480839 · Nagel, Kerstin A, Putz, Alexander, Gilmer, Frank et al.2020 · 374 citationsFunctional plant biology : FPB. 2012;39(11):891-904
Recovery dynamics of growth, photosynthesis and carbohydrate accumulation after de-submergence: a comparison between two wetland plants showing escape and quiescence strategies.21041230 · Luo, Fang-Li, Nagel, Kerstin A, Scharr, Hanno et al.2011 · 120 citationsAnnals of botany. 2011;107(1):49-63
Range flow in varying illumination: algorithms and comparisons.20634558 · Schuchert, Tobias, Aach, Til, Scharr, Hanno2010 · 8 citationsIEEE transactions on pattern analysis and machine intelligence. 2010;32(9):1646-58
QTL analysis of early stage heterosis for biomass in Arabidopsis.19504257 · Meyer, Rhonda Christiane, Kusterer, Barbara, Lisec, Jan et al.2010 · 89 citationsTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik. 2010;120(2):227-37
Career total: 207 works. 59 are in this corpus.Showing the 50 most recent.
Profile built from the corpus for this byline.
Author records are still filling in while the Hub is in alpha. If this is your page, you'll be able to claim it soon. Spot a mistake? Tell us.