OB
Oliver Bent
cs.LGcs.AIq-bio.BMbioinformaticscs.CLcs.CYArtificial IntelligenceCOVID-19cs.CVcs.DC
On Valency
published · living versionsW_gqk6cju9·v1 · currentpublished
Ablating Design Choices for Protein Ensemble Generators Across Structural Regimes
with Eoin Quinn
1 version
Preprints & journals
18 papers in the corpus · 2017–2026Bayes-PD: Exploring a Sequence to Binding Bayesian Neural Network model trained on Phage Display data2601.03930v1 · Ilann Amiaud-Plachy, Michael Blank, Oliver Bent et al.2026 · 0 citationsarXiv
GeoGraph: Geometric and Graph-based Ensemble Descriptors for Intrinsically Disordered Proteins2510.00774v2 · Eoin Quinn, Marco Carobene, Jean Quentin et al.2025 · 0 citationsarXiv
Discriminative protein sequence modelling with Latent Space Diffusion2503.18551v1 · Eoin Quinn, Ghassene Jebali, Maxime Seince et al.2025 · 0 citationsarXiv
Universally applicable and tunable graph-based coarse-graining for Machine learning force fields2504.01973v1 · Christoph Brunken, Sebastien Boyer, Mustafa Omar et al.2025 · 0 citationsarXiv
Metalic: Meta-Learning In-Context with Protein Language Models2410.08355v3 · Jacob Beck, Shikha Surana, Manus McAuliffe et al.2024 · 2 citationsThe Thirteenth International Conference on Learning Representations (ICLR 2025)
Generative Model for Small Molecules with Latent Space RL Fine-Tuning to Protein Targets2407.13780v1 · Ulrich A. Mbou Sob, Qiulin Li, Miguel Arbes'u et al.2024 · 0 citationsarXiv
Likelihood-based fine-tuning of protein language models for few-shot fitness prediction and design10.1101/2024.05.28.596156v4 · Hawkins-Hooker, A., Surana, S., Simons, J. et al.2024 · 6 citationsbioRxiv
Model-based reinforcement learning for protein backbone design2405.01983v1 · Frederic Renard, Cyprien Courtot, Alfredo Reichlin et al.2024 · 0 citationsarXiv
Protein binding affinity prediction under multiple substitutions applying eGNNs on Residue and Atomic graphs combined with Language model information: eGRAL2405.02374v1 · Arturo Fiorellini-Bernardis, Sebastien Boyer, Christoph Brunken et al.2024 · 0 citationsarXiv
Offline RL for generative design of protein binders10.1101/2023.11.29.569328v1 · Tarasov, D., Mbou Sob, U. A., Arbesu, M. et al.2023 · 0 citationsbioRxiv
Predicting protein stability changes under multiple amino acid substitutions using equivariant graph neural networks2305.19801v1 · Sebastien Boyer, Sam Money-Kyrle, Oliver Bent2023 · 1 citationarXiv
Learning to Act: Novel Integration of Algorithms and Models for Epidemic Preparedness2210.02055v1 · Sekou L. Remy, Oliver E. Bent2022 · 0 citationsarXiv
BON: An extended public domain dataset for human activity recognition2209.05077v1 · Girmaw Abebe Tadesse, Oliver Bent, Komminist Weldemariam et al.2022 · 4 citationsarXiv
A Framework for Inferring Epidemiological Model Parameters using Bayesian Nonparametrics.35308928 · Bent, Oliver E, Wachira, Charles, Remy, Sekou L et al.2022 · 0 citationsAMIA ... Annual Symposium proceedings. AMIA Symposium. 2021;2021:217-226
AI-assisted tracking of worldwide non-pharmaceutical interventions for COVID-19.33767205 · Suryanarayanan, Parthasarathy, Tsou, Ching-Huei, Poddar, Ananya et al.2021 · 32 citationsScientific data. 2021;8(1):94
Promoting Distributed Trust in Machine Learning and Computational Simulation via a Blockchain Network1810.11126v1 · Nelson Kibichii Bore, Ravi Kiran Raman, Isaac M. Markus et al.2018 · 3 citationsarXiv
Reshaping the use of digital tools to fight malaria1805.05418v1 · Sekou L. Remy, Oliver Bent, Nelson Bore2018 · 2 citationsarXiv
Novel Exploration Techniques (NETs) for Malaria Policy Interventions1712.00428v1 · Oliver Bent, Sekou L. Remy, Stephen Roberts et al.2017 · 19 citationsarXiv
Career total: 35 works. 18 are in this corpus.
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