JL
Joshua Yao-Yu Lin
cs.LGastro-ph.HEastro-ph.COastro-ph.GAastro-ph.IMCicatrix, Hypertrophiccs.CVDiffusion Magnetic Resonance ImagingKeloidneuroscience
On Valency
published · living versionsW_fwzmgj9y·v1 · currentpublished
iGC: Antibody Optimization via Reinforcement Learning over a Learned Somatic Hypermutation Prior
with Thao Nguyen, Robert G. Alberstein, Ewa Nowara, Homa MohammadiPeyhani +8
1 version
Preprints & journals
28 papers in the corpus · 2019–2025DyAb: sequence-based antibody design and property prediction in a low-data regime.42665538 · Lin, Joshua Yao-Yu, Hofmann, Jennifer L, Leaver-Fay, Andrew et al.2026 · 2 citationsmAbs. 2026;18(1):2717460
Property Enhancer - a data efficient multi-objective approach for functional antibody optimization10.1101/2025.10.08.681101v1 · Tagasovska, N., Ludwiczak, J., Loukas, A. et al.2025 · 0 citationsbioRxiv
Targeted spiral ganglion neuron degeneration in parvalbumin-Cre neonatal mice.40206512 · Nguyen, Nhi V, Lin, Joshua S, Parikh, Miti J et al.2026 · 1 citationMolecular therapy. Methods & clinical development. 2025;33(2):101440
Laser-Assisted Drug Delivery in the Treatment of Hypertrophic Scars and Keloids: A Systematic Review.38347765 · Bernabe, Rendell M, Choe, Deborah, Calero, Tiffany et al.2024 · 11 citationsJournal of burn care & research : official publication of the American Burn Association. 2024;45(3):590-600
Disparities in Sporadic Vestibular Schwannoma Initial Presentation Between a Public Safety Net Hospital and Tertiary Academic Medical Center at the Same Zip Code 2010 to 2020.38517145 · Cutri, Raffaello M, Lin, Joshua, Wilson, Melissa L et al.2024 · 6 citationsThe Annals of otology, rhinology, and laryngology. 2024;133(6):605-612
The effectiveness and safety of lifestyle medicine and integrative therapies in inflammatory arthritis: an umbrella review using a hierarchical evidence gathering approach.38545510 · Lin, Joshua, Liu, Jing, O'Fee, Allana et al.2024 · 15 citationsFrontiers in medicine. 2024;11:1357914
LenSiam: Self-Supervised Learning on Strong Gravitational Lens Images2311.10100v1 · Po-Wen Chang, Kuan-Wei Huang, Joshua Fagin et al.2023 · 0 citationsarXiv
Combining scar-modulating agents for the treatment of hypertrophic scars and keloids: A systematic review.37979279 · Bernabe, Rendell M, Won, Paul, Lin, Joshua et al.2024 · 14 citationsJournal of plastic, reconstructive & aesthetic surgery : JPRAS. 2024;88:125-140
Neomycin-induced deafness in neonatal mice.37031766 · Cutri, Raffaello M, Lin, Joshua, Nguyen, Nhi V et al.2023 · 6 citationsJournal of neuroscience methods. 2023;391:109852
SupSiam: Non-contrastive Auxiliary Loss for Learning from Molecular Conformers2302.07754v1 · Michael Maser, Ji Won Park, Joshua Yao-Yu Lin et al.2023 · 1 citationarXiv
Fully Automated Deep Learning-enabled Detection for Hepatic Steatosis on Computed Tomography: A Multicenter International Validation Study2210.15149v3 · Zhongyi Zhang, Guixia Li, Ziqiang Wang et al.2022 · 1 citationarXiv
Strong Gravitational Lensing Parameter Estimation with Vision Transformer2210.04143v1 · Kuan-Wei Huang, Geoff Chih-Fan Chen, Po-Wen Chang et al.2022 · 11 citationsarXiv
Ingredients of a Natural Oral Nutritional Supplement and Their Role in the Treatment of Osteoarthritis.35360183 · Bharat, Krish Tejas, Manhas, Navdeep Singh, Gutcho, James et al.2022 · 11 citationsClinical medicine insights. Arthritis and musculoskeletal disorders. 2022;15:11795441211063365
VLBInet: Radio Interferometry Data Classification for EHT with Neural Networks2110.07185v1 · Joshua Yao-Yu Lin, Dominic W. Pesce, George N. Wong et al.2021 · 3 citationsarXiv
Galaxy Morphological Classification with Efficient Vision Transformer2110.01024v2 · Joshua Yao-Yu Lin, Song-Mao Liao, Hung-Jin Huang et al.2021 · 12 citationsarXiv
AGNet: Weighing Black Holes with Deep Learning2108.07749v2 · Joshua Yao-Yu Lin, Sneh Pandya, Devanshi Pratap et al.2021 · 6 citationsMonthly Notices of the Royal Astronomical Society, 2022;, stac3339
Deep neural network analysis employing diffusion basis spectrum imaging metrics as classifiers improves prostate cancer detection and grading10.1101/2021.03.22.436514v1 · Ye, Z., Yang, Q., Lin, J. et al.2021 · 0 citationsbioRxiv
A Deep Learning Approach for Active Anomaly Detection of Extragalactic Transients2103.12102v1 · V. Ashley Villar, Miles Cranmer, Edo Berger et al.2021 · 49 citationsarXiv
Diffusion histology imaging differentiates distinct pediatric brain tumor histology.33637807 · Ye, Zezhong, Srinivasa, Komal, Meyer, Ashely et al.2021 · 18 citationsScientific reports. 2021;11(1):4749
deeplenstronomy: A dataset simulation package for strong gravitational lensing2102.02830v1 · Robert Morgan, Brian Nord, Simon Birrer et al.2021 · 12 citationsJournal of Open Source Software, 6(58), 2854 (2021)
AGNet: Weighing Black Holes with Machine Learning2011.15095v2 · Joshua Yao-Yu Lin, Sneh Pandya, Devanshi Pratap et al.2020 · 1 citationarXiv
Learning Principle of Least Action with Reinforcement Learning2011.11891v2 · Zehao Jin, Joshua Yao-Yu Lin, Siao-Fong Li2020 · 3 citationsarXiv
Hunting for Dark Matter Subhalos in Strong Gravitational Lensing with Neural Networks2010.12960v2 · Joshua Yao-Yu Lin, Hang Yu, Warren Morningstar et al.2020 · 4 citationsarXiv
Anomaly Detection for Multivariate Time Series of Exotic Supernovae2010.11194v1 · V. Ashley Villar, Miles Cranmer, Gabriella Contardo et al.2020 · 4 citationsarXiv
Diffusion Histology Imaging Combining Diffusion Basis Spectrum Imaging (DBSI) and Machine Learning Improves Detection and Classification of Glioblastoma Pathology.32694155 · Ye, Zezhong, Price, Richard L, Liu, Xiran et al.2021 · 40 citationsClinical cancer research : an official journal of the American Association for Cancer Research. 2020;26(20):5388-5399
Feature Extraction on Synthetic Black Hole Images2007.00794v1 · Joshua Yao-Yu Lin, George N. Wong, Ben S. Prather et al.2020 · 6 citationsarXiv
Deep learning with diffusion basis spectrum imaging for classification of multiple sclerosis lesions.32304291 · Ye, Zezhong, George, Ajit, Wu, Anthony T et al.2021 · 52 citationsAnnals of clinical and translational neurology. 2020;7(5):695-706
Diffusion Basis Spectrum Imaging with Deep Neural Network Differentiates Distinct Histology in Pediatric Brain Tumors10.1101/2020.04.02.020875v1 · Ye, Z., Srinivasa, K., Lin, J. et al.2020 · 3 citationsbioRxiv
Career total: 38 works. 28 are in this corpus.
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