TW
Tianming Wang
Nucleic Acid ConformationPhylogenyAlgorithmsMarkov ChainsModels, GeneticBase SequenceComputational BiologyComputer SimulationModels, MolecularProtein Conformation
On Valency
published · living versionsW_mv6sqqqs·v1 · currentpublished
OpenStripe supports open-set identification and spatial stripe profiling in wild Amur tigers
with Yichun Peng, Yansong Li, Jin Hou, Qi Song +7
1 version
Preprints & journals
43 papers in the corpus · 2003–2013Linear regression model of short k-word: a similarity distance suitable for biological sequences with various lengths.23933105 · Yang, Xiwu, Wang, Tianming2014 · 21 citationsJournal of theoretical biology. 2013;337:61-70
Large local analysis of the unaligned genome and its application.23294269 · Yang, Lianping, Zhang, Xiangde, Wang, Tianming et al.2013 · 18 citationsJournal of computational biology : a journal of computational molecular cell biology. 2013;20(1):19-29
A novel statistical measure for sequence comparison on the basis of k-word counts.23147229 · Yang, Xiwu, Wang, Tianming2013 · 23 citationsJournal of theoretical biology. 2013;318:91-100
A simple k-word interval method for phylogenetic analysis of DNA sequences.23085256 · Ding, Shuyan, Li, Yang, Yang, Xiwu et al.2013 · 18 citationsJournal of theoretical biology. 2013;317:192-9
A novel protein structural classes prediction method based on predicted secondary structure.22353242 · Ding, Shuyan, Zhang, Shengli, Li, Yang et al.2012 · 62 citationsBiochimie. 2012;94(5):1166-71
Phylogenetic analysis of protein sequences based on distribution of length about common sub-string.21461804 · Chang, Guisong, Wang, Tianming2011 · 17 citationsThe protein journal. 2011;30(3):167-72
Weighted relative entropy for alignment-free sequence comparison based on Markov model.21142223 · Chang, Guisong, Wang, Tianming2011 · 10 citationsJournal of biomolecular structure & dynamics. 2011;28(4):545-55
High-accuracy prediction of protein structural class for low-similarity sequences based on predicted secondary structure.21237245 · Zhang, Shengli, Ding, Shuyan, Wang, Tianming2011 · 67 citationsBiochimie. 2011;93(4):710-4
Genome analysis with the conditional multinomial distribution profile.21129383 · Chang, Guisong, Wang, Tianming2015 · 8 citationsJournal of theoretical biology. 2011;271(1):44-50
Phylogenetic analysis of DNA sequences based on the generalized pseudo-amino acid composition.21040733 · Huang, Yujuan, Yang, Lianping, Wang, Tianming2011 · 17 citationsJournal of theoretical biology. 2011;269(1):217-23
A complexity-based method to compare RNA secondary structures and its application.20645657 · Zhang, Shengli, Wang, Tianming2010 · 16 citationsJournal of biomolecular structure & dynamics. 2010;28(2):247-58
A simple feature representation vector for phylogenetic analysis of DNA sequences.20665972 · Ding, Shuyan, Dai, Qi, Liu, Hongmei et al.2010 · 16 citationsJournal of theoretical biology. 2010;265(4):618-23
Vector representations and related matrices of DNA primary sequence based on L-tuple.20688086 · Liu, Ying-zhao, Wang, Tian-ming2011 · 3 citationsMathematical biosciences. 2010;227(2):147-52
Use of the Burrows-Wheeler similarity distribution to the comparison of the proteins.20300789 · Yang, Lianping, Chang, Guisong, Zhang, Xiangde et al.2010 · 12 citationsAmino acids. 2010;39(3):887-98
The Burrows-Wheeler similarity distribution between biological sequences based on Burrows-Wheeler transform.19903487 · Yang, Lianping, Zhang, Xiangde, Wang, Tianming2010 · 31 citationsJournal of theoretical biology. 2010;262(4):742-9
A new method to analyze the similarity of protein structure using TOPS representations.18808202 · Guo, Ying, Wang, Tian-ming2008 · 11 citationsJournal of biomolecular structure & dynamics. 2008;26(3):367-74
Comparison study on k-word statistical measures for protein: from sequence to 'sequence space'.18811946 · Dai, Qi, Wang, Tianming2008 · 39 citationsBMC bioinformatics. 2008;9:394
Markov model plus k-word distributions: a synergy that produces novel statistical measures for sequence comparison.18710871 · Dai, Qi, Yang, Yanchun, Wang, Tianming2008 · 69 citationsBioinformatics (Oxford, England). 2008;24(20):2296-302
Characterization of protein primary sequences based on partial ordering.18671982 · Feng, Jie, Wang, Tian-Ming2008 · 53 citationsJournal of theoretical biology. 2008;254(4):752-5
Use of statistical measures for analyzing RNA secondary structures.18172840 · Dai, Qi, Wang, Tian-Ming2008 · 2 citationsJournal of computational chemistry. 2008;29(8):1292-305
Condensed representations of protein secondary structure sequences and their application.18399695 · Feng, Jie, Wang, Tian-ming2008 · 5 citationsJournal of biomolecular structure & dynamics. 2008;25(6):621-8
Use of linear regression model to compare RNA secondary structures.18538347 · Dai, Qi, Wang, Tianming2008 · 1 citationJournal of theoretical biology. 2008;253(4):854-60
Comparison of TOPS strings based on LZ complexity.18166201 · Liu, Liwei, Wang, Tianming2008 · 15 citationsJournal of theoretical biology. 2008;251(1):159-66
Characteristic distribution of L-tuple for DNA primary sequence.17676941 · Liu, Ying-Zhao, Yang, Yan-Chun, Wang, Tian-Ming2007 · 11 citationsJournal of biomolecular structure & dynamics. 2007;25(1):85-91
Linear regression model of DNA sequences and its application.17334986 · Dai, Qi, Liu, Xiao-Qing, Wang, Tian-Ming et al.2007 · 10 citationsJournal of computational chemistry. 2007;28(8):1434-45
C(i,j) matrix: a better numerical characterization for graphical representations of biological sequences.17428502 · Dai, Qi, Liu, Xiao-Qing, Wang, Tian-Ming2007 · 4 citationsJournal of theoretical biology. 2007;247(1):103-9
Numerical characterization of DNA sequences based on the k-step Markov chain transition probability.16981233 · Dai, Qi, Liu, Xiao-Qing, Wang, Tian-Ming2007 · 14 citationsJournal of computational chemistry. 2006;27(15):1830-42
A method for rapid similarity analysis of RNA secondary structures.17090331 · Liu, Na, Wang, Tianming2006 · 23 citationsBMC bioinformatics. 2006;7:493
Protein-based phylogenetic analysis by using hydropathy profile of amino acids.16979630 · Liu, Na, Wang, Tianming2006 · 28 citationsFEBS letters. 2006;580(22):5321-7
A simple method for protein structural classification.16997588 · Liu, Na, Wang, Tianming2007 · 4 citationsJournal of molecular graphics & modelling. 2007;25(6):852-5
2D representation of protein secondary structure sequences and its applications.16721724 · Liu, Liwei, Wang, Tianming2007 · 11 citationsJournal of computational chemistry. 2006;27(11):1119-24
PNN-curve: a new 2D graphical representation of DNA sequences and its application.16945387 · Liu, Xiao Qing, Dai, Qi, Xiu, Zhilong et al.2007 · 63 citationsJournal of theoretical biology. 2006;243(4):555-61
A representation of DNA primary sequences by random walk.17306305 · Bai, Feng-lan, Liu, Ying-zhao, Wang, Tian-ming2007 · 28 citationsMathematical biosciences. 2007;209(1):282-91
On graphical and numerical representation of protein sequences.16494503 · Bai, Fenglan, Wang, Tianming2006 · 59 citationsJournal of biomolecular structure & dynamics. 2006;23(5):537-46
A weighted measure for the similarity analysis of DNA sequences.16568272 · Liu, Na, Wang, Tianming2006 · 7 citationsJournal of molecular modeling. 2006;12(6):897-903
A novel 2D graphical representation of DNA sequences and its application.16515870 · Dai, Qi, Liu, Xiaoqing, Wang, Tianming2007 · 48 citationsJournal of molecular graphics & modelling. 2006;25(3):340-4
A class of 2D graphical representations of RNA secondary structures and the analysis of similarity based on them.16021599 · Yao, Yu-Hua, Nan, Xu-Ying, Wang, Tian-Ming2005 · 37 citationsJournal of computational chemistry. 2005;26(13):1339-46
On a six-dimensional representation of RNA secondary structures.15588108 · Liao, Bo, Ding, Kequan, Wang, Tian-ming2005 · 36 citationsJournal of biomolecular structure & dynamics. 2005;22(4):455-63
General combinatorics of RNA secondary structure.15312744 · Liao, Bo, Wang, Tian-ming2004 · 10 citationsMathematical biosciences. 2004;191(1):69-81
Analysis of similarity/dissimilarity of DNA sequences based on nonoverlapping triplets of nucleotide bases.15446824 · Liao, Bo, Wang, Tian-Ming2005 · 77 citationsJournal of chemical information and computer sciences. 2004;44(5):1666-70
New 2D graphical representation of DNA sequences.15185330 · Liao, Bo, Wang, Tian-Ming2004 · 114 citationsJournal of computational chemistry. 2004;25(11):1364-8
A 3D graphical representation of RNA secondary structures.15107004 · Liao, B, Wang, T-M2005 · 56 citationsJournal of biomolecular structure & dynamics. 2004;21(6):827-32
General combinatorics of RNA hairpins and cloverleaves.12870904 · Liao, Bo, Wang, Tian-ming2003 · 7 citationsJournal of chemical information and computer sciences. 2003;43(4):1138-42
Career total: 171 works. 43 are in this corpus.
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