CN
Carl Nettelblad
Softwarecs.CVcs.LGflash X-ray imaginggenomicsGenotypebioinformaticsbiophysicsColiphagesdeep learning
On Valency
published · living versionsW_7fgcfgyz·v1 · currentpublished
Project Hephaistos - II. Dyson sphere candidates from Gaia DR3, 2MASS, and WISE
with Matías Suazo, Erik Zackrisson, Priyatam K. Mahto, Fabian Lundell +3
1 version
Preprints & journals
39 papers in the corpus · 2011–2026Imaging aerosolized viruses with an X-ray free-electron laser using single-particle rotational invariants2606.23396v1 · Tim B. Berberich, Johan Bielecki, Jonas A. Sellberg et al.2026 · 0 citationsarXiv
Dimensionality reduction of genetic data using contrastive learning.40194517 · Thor, Filip, Nettelblad, Carl2026 · 8 citationsGenetics. 2026;232(1)
Learning Genomic Structure from -mers2505.16680v1 · Filip Thor, Carl Nettelblad2025 · 0 citationsarXiv
Using feedback in pooled experiments augmented with imputation for high genotyping accuracy at reduced cost.39847531 · Clouard, Camille, Nettelblad, Carl2025 · 0 citationsG3 (Bethesda, Md.). 2025;15(3)
Project Hephaistos - II. Dyson sphere candidates from Gaia DR3, 2MASS, and WISE2405.02927v1 · Mat'ias Suazo, Erik Zackrisson, Priyatam K. Mahto et al.2024 · 23 citationsarXivon Valency
Genotyping of SNPs in bread wheat at reduced cost from pooled experiments and imputation.38243086 · Clouard, Camille, Nettelblad, Carl2024 · 8 citationsTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik. 2024;137(1):26
Observation of a single protein by ultrafast X-ray diffraction.38216563 · Ekeberg, Tomas, Assalauova, Dameli, Bielecki, Johan et al.2024 · 42 citationsLight, science & applications. 2024;13(1):15
Achieving improved accuracy for imputation of ancient DNA.36377787 · Ausmees, Kristiina, Nettelblad, Carl2023 · 14 citationsBioinformatics (Oxford, England). 2023;39(1)
A joint use of pooling and imputation for genotyping SNPs.36229780 · Clouard, Camille, Ausmees, Kristiina, Nettelblad, Carl2022 · 4 citationsBMC bioinformatics. 2022;23(1):421
An empirical evaluation of genotype imputation of ancient DNA.35482488 · Ausmees, Kristiina, Sanchez-Quinto, Federico, Jakobsson, Mattias et al.2022 · 33 citationsG3 (Bethesda, Md.). 2022;12(6)
A deep learning framework for characterization of genotype data.35078229 · Ausmees, Kristiina, Nettelblad, Carl2022 · 20 citationsG3 (Bethesda, Md.). 2022;12(3)
Training algorithm matters for the performance of neural network potential: A case study of Adam and the Kalman filter optimizers.34852491 · Shao, Yunqi, Dietrich, Florian M, Nettelblad, Carl et al.2021 · 16 citationsThe Journal of chemical physics. 2021;155(20):204108
Diffraction data from aerosolized Coliphage PR772 virus particles imaged with the Linac Coherent Light Source.33214568 · Li, Haoyuan, Nazari, Reza, Abbey, Brian et al.2021 · 9 citationsScientific data. 2020;7(1):404
Flash X-ray diffraction imaging in 3D: a proposed analysis pipeline.33104615 · Liu, Jing, Engblom, Stefan, Nettelblad, Carl2020 · 0 citationsJournal of the Optical Society of America. A, Optics, image science, and vision. 2020;37(10):1673-1686
Bootstrapping Weakly Supervised Segmentation-free Word Spotting through HMM-based Alignment2003.11087v1 · Tomas Wilkinson, Carl Nettelblad2020 · 3 citationsarXiv
The presence and impact of reference bias on population genomic studies of prehistoric human populations.31348818 · Günther, Torsten, Nettelblad, Carl2019 · 228 citationsPLoS genetics. 2019;15(7):e1008302
Electrospray sample injection for single-particle imaging with x-ray lasers.31058226 · Bielecki, Johan, Hantke, Max F, Daurer, Benedikt J et al.2019 · 72 citationsScience advances. 2019;5(5):eaav8801
Erratum: Experimental strategies for imaging bioparticles with femtosecond hard X-ray pulses. Corrigendum.31098030 · Daurer, Benedikt J, Okamoto, Kenta, Bielecki, Johan et al.2024 · 1 citationIUCrJ. 2019;6(Pt 3):500
Considerations for three-dimensional image reconstruction from experimental data in coherent diffractive imaging.30224956 · Lundholm, Ida V, Sellberg, Jonas A, Ekeberg, Tomas et al.2024 · 55 citationsIUCrJ. 2018;5(Pt 5):531-541
Assessing uncertainties in x-ray single-particle three-dimensional reconstruction.30110794 · Liu, Jing, Engblom, Stefan, Nettelblad, Carl2018 · 5 citationsPhysical review. E. 2018;98(1-1):013303
BAMSI: a multi-cloud service for scalable distributed filtering of massive genome data.29940842 · Ausmees, Kristiina, John, Aji, Toor, Salman Z et al.2019 · 7 citationsBMC bioinformatics. 2018;19(1):240
Correlations in Scattered X-Ray Laser Pulses Reveal Nanoscale Structural Features of Viruses.29077445 · Kurta, Ruslan P, Donatelli, Jeffrey J, Yoon, Chun Hong et al.2018 · 113 citationsPhysical review letters. 2017;119(15):158102
Artifact reduction in the CSPAD detectors used for LCLS experiments.28862634 · Pietrini, Alberto, Nettelblad, Carl2019 · 6 citationsJournal of synchrotron radiation. 2017;24(Pt 5):1092-1097
Femtosecond X-ray Fourier holography imaging of free-flying nanoparticles1707.09424v2 · Tais Gorkhover, Anatoli Ulmer, Ken Ferguson et al.2017 · 70 citationsarXiv
Coherent soft X-ray diffraction imaging of coliphage PR772 at the Linac coherent light source.28654088 · Reddy, Hemanth K N, Yoon, Chun Hong, Aquila, Andrew et al.2018 · 69 citationsScientific data. 2017;4:170079
Experimental strategies for imaging bioparticles with femtosecond hard X-ray pulses.28512572 · Daurer, Benedikt J, Okamoto, Kenta, Bielecki, Johan et al.2024 · 76 citationsIUCrJ. 2017;4(Pt 3):251-262
A hybrid method for the imputation of genomic data in livestock populations.28253858 · Antolín, Roberto, Nettelblad, Carl, Gorjanc, Gregor et al.2017 · 30 citationsGenetics, selection, evolution : GSE. 2017;49(1):30
CannyFS: Opportunistically Maximizing I/O Throughput Exploiting the Transactional Nature of Batch-Mode Data Processing1612.06830v1 · Jessica Nettelblad, Carl Nettelblad2016 · 1 citationarXiv
Coherent diffraction of single Rice Dwarf virus particles using hard X-rays at the Linac Coherent Light Source.27478984 · Munke, Anna, Andreasson, Jakob, Aquila, Andrew et al.2016 · 80 citationsScientific data. 2016;3:160064
Hummingbird: monitoring and analyzing flash X-ray imaging experiments in real time.27275147 · Daurer, Benedikt J, Hantke, Max F, Nettelblad, Carl et al.2024 · 36 citationsJournal of applied crystallography. 2016;49(Pt 3):1042-1047
A Flexible Computational Framework Using R and Map-Reduce for Permutation Tests of Massive Genetic Analysis of Complex Traits.26887003 · Mahjani, Behrang, Toor, Salman, Nettelblad, Carl et al.2017 · 1 citationIEEE/ACM transactions on computational biology and bioinformatics. 2017;14(2):381-392
Three-dimensional reconstruction of the giant mimivirus particle with an x-ray free-electron laser.25793853 · Ekeberg, Tomas, Svenda, Martin, Abergel, Chantal et al.2015 · 344 citationsPhysical review letters. 2015;114(9):098102
MAPfastR: quantitative trait loci mapping in outbred line crosses.24122053 · Nelson, Ronald M, Nettelblad, Carl, Pettersson, Mats E et al.2014 · 8 citationsG3 (Bethesda, Md.). 2013;3(12):2147-9
Fast and accurate detection of multiple quantitative trait Loci.23919387 · Nettelblad, Carl, Mahjani, Behrang, Holmgren, Sverker2014 · 2 citationsJournal of computational biology : a journal of computational molecular cell biology. 2013;20(9):687-702
Breakdown of methods for phasing and imputation in the presence of double genotype sharing.23555958 · Nettelblad, Carl2013 · 2 citationsPloS one. 2013;8(3):e60354
Inferring haplotypes and parental genotypes in larger full sib-ships and other pedigrees with missing or erroneous genotype data.23046532 · Nettelblad, Carl2013 · 10 citationsBMC genetics. 2012;13:85
Fast and Accurate Detection of Multiple QTL1209.6245v1 · Carl Nettelblad, Behrang Mahjani, Sverker Holmgren2012 · 0 citationsarXiv
An Improved Method for Estimating Chromosomal Line Origin in QTL Analysis of Crosses Between Outbred Lines.22384318 · Crooks, Lucy, Nettelblad, Carl, Carlborg, Orjan2012 · 9 citationsG3 (Bethesda, Md.). 2011;1(1):57-64
Haplotype inference based on Hidden Markov Models in the QTL-MAS 2010 multi-generational dataset.21624166 · Nettelblad, Carl2011 · 2 citationsBMC proceedings. 2011;5 Suppl 3:S10
Career total: 84 works. 39 are in this corpus.
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