AG
Aaron Golden
astro-ph.SRastro-phastro-ph.IMastro-ph.HEastro-ph.EPDNA MethylationSoftwareAlgorithmsDNA methylationGenome, Human
On Valency
published · living versionsW_2tjzxh3p·v1 · currentpublished
Periodic Optical Variability of Radio Detected Ultracool Dwarfs
with Leon K. Harding, Gregg Hallinan, Richard P. Boyle, Navtej Singh +3
1 version
W_xg8mbmj2·v1published
Preprints & journals
85 papers in the corpus · 1999–2026Early Optic Nerve Head Swelling Rate Is Associated with Worsening of Visual Outcomes in Nonarteritic Anterior Ischemic Optic Neuropathy.42155674 · Woods, Brian, Szanto, David, Wang, Jui-Kai et al.2026 · 1 citationOphthalmology. 2026;133(10):1242-1254
Radio Activity from the Rapidly Rotating T dwarf 2MASS 2228-43102601.04158v1 · Kelvin Wandia, Michael A. Garrett, Aaron Golden et al.2026 · 0 citationsarXiv
Automated Retinal Vascular Analysis Reveals Response to Acetazolamide in Idiopathic Intracranial Hypertension.41342622 · Woods, Brian, Szanto, David, Wang, Jui-Kai et al.2025 · 0 citationsTranslational vision science & technology. 2025;14(12):9
Combining the second data release of the European Pulsar Timing Array with low-frequency pulsar data2510.04639v2 · F. Iraci, A. Chalumeau, C. Tiburzi et al.2025 · 5 citationsarXiv
RRAT-like behaviour of PSR B0656+14 observed with I-LOFAR2507.04518v1 · S. C. Susarla, R. Ferguson, O. A. Johnson et al.2025 · 0 citationsA&A 700, A170 (2025)
A prognostic PET radiomic model for risk stratification in non-small cell lung cancer: integrating radiogenomics and clinical features to predict survival and uncover tumor biology insights.40456948 · Taheri, Parisa, Golden, Aaron2025 · 7 citationsJournal of cancer research and clinical oncology. 2025;151(6):180
Long-term Timing Results of Ecliptic Pulsars Observed with I-LOFAR2505.09549v1 · S. C. Susarla, O. A. Johnson, D. J. McKenna et al.2025 · 2 citationsA&A 698, A248 (2025)
Mining the time axis with TRON. II. MeerKAT detects a stellar radio flare from a distant RS CVn candidate2501.09489v2 · Oleg M. Smirnov, Aaron Golden, Talon Myburgh et al.2025 · 5 citationsarXiv
The impact on astrometry by solar-wind effect in pulsar timing2412.07103v1 · K. Liu, A. Parthasarathy, M. Keith et al.2024 · 6 citationsarXiv
Exploring the time variability of the Solar Wind using LOFAR pulsar data2409.09838v1 · S. C. Susarla, A. Chalumeau, C. Tiburzi et al.2024 · 18 citationsA&A 692, A18 (2024)
LncRNA antigens- a novel resource to improve immunotherapy efficacy predictions in Melanoma10.1101/2023.05.30.23290735v1 · Malik, S., Golden, A.2023 · 1 citationmedRxiv
Teaching graduate research skills in genomics via an integrated 'flipped' journal club program.36373857 · Golden, Aaron2023 · 7 citationsBiochemistry and molecular biology education : a bimonthly publication of the International Union of Biochemistry and Molecular Biology. 2023;51(1):57-64
Optical Variability, Rotation Period and Inclination Angle of the M9.5 dwarf BRI 0021-02142211.00809v1 · S. Dulaimi, A. Golden, R. P. Boyle et al.2022 · 1 citationarXiv
GNOSIS: an R Shiny app supporting cancer genomics survival analysis with cBioPortal.35677713 · King, Lydia, Flaus, Andrew, Coughlan, Simone et al.2022 · 2 citationsHRB open research. 2022;5:8
Exploring breast and prostate cancer RNA-seq derived radiosensitivity with the Genomic Adjusted Radiation Dose (GARD) model.36017133 · Nolan, Ben, O'Sullivan, Brian, Golden, Aaron2022 · 11 citationsClinical and translational radiation oncology. 2022;36:127-131
Loss of MMR and TGFBR2 Increases the Susceptibility to Microbiota-Dependent Inflammation-Associated Colon Cancer.35688320 · Tosti, Elena, Almeida, Ana S, Tran, Tam T T et al.2022 · 13 citationsCellular and molecular gastroenterology and hepatology. 2022;14(3):693-717
Observing Jupiter's radio emissions using multiple LOFAR stations: a first case study of the Io-decametric emission using the Irish IE613, French FR606 and German DE604 stations2111.09599v2 · Corentin K. Louis, Caitriona M. Jackman, Jean-Mathias Griessmeier et al.2021 · 4 citationsRASTAI 1, 48-57 (2022)
Coronal mass ejections and type II radio emission variability during a magnetic cycle on the solar-type star Eridani2111.02284v1 · D'ualta 'O Fionnag'ain, Robert D. Kavanagh, Aline A. Vidotto et al.2021 · 20 citationsarXiv
First Results from the REAL-time Transient Acquisition backend (REALTA) at the Irish LOFAR station2108.11251v1 · P. C. Murphy, P. Callanan, J. McCauley et al.2021 · 13 citationsA&A 655, A16 (2021)
Histone sequence variation in divergent eukaryotes facilitates diversity in chromatin packaging10.1101/2021.05.12.443918v1 · Patwal, I., Trinh, H., Golden, A. et al.2021 · 6 citationsbioRxiv
MAORY: A Multi-conjugate Adaptive Optics RelaY for ELT2103.11219v1 · Paolo Ciliegi, Guido Agapito, Matteo Aliverti et al.2021 · 14 citationsThe Messenger 182 (March 2021): 13-16
Survival outcomes are associated with genomic instability in luminal breast cancers.33534788 · King, Lydia, Flaus, Andrew, Holian, Emma et al.2021 · 12 citationsPloS one. 2021;16(2):e0245042
A review of subtidal kelp forests in Ireland: From first descriptions to new habitat monitoring techniques.32724553 · Schoenrock, Kathryn M, Chan, Kenan M, O'Callaghan, Tony et al.2024 · 13 citationsEcology and evolution. 2020;10(13):6819-6832
Multi-Epoch VLBI of L Dwarf Binary 2MASS J0746+2000AB: Precise Mass Measurements and Confirmation of Radio Emission from Both Components2005.03657v1 · Qicheng Zhang, Gregg Hallinan, Walter Brisken et al.2020 · 12 citationsAstrophys.J. 897 (2020) 11
AptCompare: optimized de novo motif discovery of RNA aptamers via HTS-SELEX.31999328 · Shieh, Kevin R, Kratschmer, Christina, Maier, Keith E et al.2020 · 20 citationsBioinformatics (Oxford, England). 2020;36(9):2905-2906
Genetic contributors to risk of schizophrenia in the presence of a 22q11.2 deletion.32015465 · Cleynen, Isabelle, Engchuan, Worrawat, Hestand, Matthew S et al.2022 · 126 citationsMolecular psychiatry. 2021;26(8):4496-4510
Correction: Septin 9 isoforms promote tumorigenesis in mammary epithelial cells by increasing migration and ECM degradation through metalloproteinase secretion at focal adhesions.31576012 · Marcus, Jenna, Bejerano-Sagie, Michal, Patterson, Nicole et al.2021 · 1 citationOncogene. 2020;39(8):1830
Septin 9 isoforms promote tumorigenesis in mammary epithelial cells by increasing migration and ECM degradation through metalloproteinase secretion at focal adhesions.31285548 · Marcus, Jenna, Bejerano-Sagie, Michal, Patterson, Nicole et al.2020 · 38 citationsOncogene. 2019;38(30):5839-5859
Resveratrol Improves Vascular Function and Mitochondrial Number but Not Glucose Metabolism in Older Adults.28329397 · Pollack, Rena M, Barzilai, Nir, Anghel, Valentin et al.2017 · 102 citationsThe journals of gerontology. Series A, Biological sciences and medical sciences. 2017;72(12):1703-1709
Inflammation-associated DNA methylation patterns in epithelium of ulcerative colitis.28557546 · Barnicle, Alan, Seoighe, Cathal, Greally, John M et al.2018 · 51 citationsEpigenetics. 2017;12(8):591-606
LPA receptor activity is basal specific and coincident with early pregnancy and involution during mammary gland postnatal development.27808166 · Acosta, Deanna, Bagchi, Susmita, Broin, Pilib Ó et al.2018 · 9 citationsScientific reports. 2016;6:35810
Understanding the Systems Biology of Pathogen Virulence Using Semantic Methodologies1604.05189v1 · David Rhee, Kevin Shieh, Julie Sullivan et al.2016 · 0 citationsarXiv
Differential DNA methylation patterns of homeobox genes in proximal and distal colon epithelial cells.26812987 · Barnicle, Alan, Seoighe, Cathal, Golden, Aaron et al.2016 · 15 citationsPhysiological genomics. 2016;48(4):257-73
Clinical and molecular significance of microvascular inflammation in transplant kidney biopsies.26422506 · Gupta, Anjali, Broin, Pilib Ó, Bao, Yi et al.2017 · 65 citationsKidney international. 2016;89(1):217-25
Structure and function of neonatal social communication in a genetic mouse model of autism.26666205 · Takahashi, T, Okabe, S, Broin, P Ó et al.2017 · 94 citationsMolecular psychiatry. 2016;21(9):1208-14
RNA:DNA hybrids in the human genome have distinctive nucleotide characteristics, chromatin composition, and transcriptional relationships.26579211 · Nadel, Julie, Athanasiadou, Rodoniki, Lemetre, Christophe et al.2015 · 178 citationsEpigenetics & chromatin. 2015;8:46
Clinical, Histological, and Molecular Markers Associated With Allograft Loss in Transplant Glomerulopathy Patients.25675205 · Kamal, Layla, Broin, Pilib Ó, Bao, Yi et al.2015 · 21 citationsTransplantation. 2015;99(9):1912-8
Magnetospherically driven optical and radio aurorae at the end of the stellar main sequence.26223623 · Hallinan, G, Littlefair, S P, Cotter, G et al.2015 · 162 citationsNature. 2015;523(7562):568-71
Development of a Targeted Multi-Disorder High-Throughput Sequencing Assay for the Effective Identification of Disease-Causing Variants.26214305 · Delio, Maria, Patel, Kunjan, Maslov, Alex et al.2016 · 17 citationsPloS one. 2015;10(7):e0133742
Integrative Metabolic Signatures for Hepatic Radiation Injury.26046990 · Kurland, Irwin Jack, Broin, Pilib Ó, Golden, Aaron et al.2016 · 42 citationsPloS one. 2015;10(6):e0124795
Intestinal microbiota-derived metabolomic blood plasma markers for prior radiation injury.25636760 · Ó Broin, Pilib, Vaitheesvaran, Bhavapriya, Saha, Subhrajit et al.2015 · 50 citationsInternational journal of radiation oncology, biology, physics. 2015;91(2):360-7
Alignment-free clustering of transcription factor binding motifs using a genetic-k-medoids approach.25627106 · Broin, Pilib Ó, Smith, Terry J, Golden, Aaron Aj2015 · 22 citationsBMC bioinformatics. 2015;16:22
toxoMine: an integrated omics data warehouse for Toxoplasma gondii systems biology research.26130662 · Rhee, David B, Croken, Matthew McKnight, Shieh, Kevin R et al.2016 · 7 citationsDatabase : the journal of biological databases and curation. 2015;2015:bav066
The meta-epigenomic structure of purified human stem cell populations is defined at cis-regulatory sequences.25327398 · Wijetunga, N Ari, Delahaye, Fabien, Zhao, Yong Mei et al.2016 · 38 citationsNature communications. 2014;5:5195
A pathogenesis-based transcript signature in donor-specific antibody-positive kidney transplant patients with normal biopsies.26484130 · Ó Broin, P, Hayde, N, Bao, Y et al.2015 · 15 citationsGenomics data. 2014;2:357-60
Role of the tumor suppressor IQGAP2 in metabolic homeostasis: Possible link between diabetes and cancer.25254002 · Vaitheesvaran, B, Hartil, K, Navare, A et al.2021 · 26 citationsMetabolomics : Official journal of the Metabolomic Society. 2014;10(5):920-937
Increased intragraft rejection-associated gene transcripts in patients with donor-specific antibodies and normal biopsies.24670411 · Hayde, Nicole, Broin, Pilib Ó, Bao, Yi et al.2015 · 48 citationsKidney international. 2014;86(3):600-9
Genomics of BK viremia in kidney transplant recipients.24310299 · Lubetzky, Michelle, Bao, Yi, O Broin, Pilib et al.2014 · 31 citationsTransplantation. 2014;97(4):451-6
Translating the TCGA breast cancer results into clinical practice: searching for therapeutic clues.24624547 · Sparano, Joseph A, Golden, Aaron A J, Montagna, Cristina2014 · 4 citationsOncology (Williston Park, N.Y.). 2013;27(12):1284, 1286
Periodic Optical Variability of Radio Detected Ultracool Dwarfs1310.1367v1 · Leon K. Harding, Gregg Hallinan, Richard P. Boyle et al.2013 · 51 citationsarXivon Valency
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