HX
Hongyi Xu
3D electron diffractionElectronsmicrocrystal electron diffractionelectron diffractionMicroED3DED3D EDcontinuous rotation electron diffractionelectron crystallographymolecular biology
On Valency
published · living versionsW_skvvxq5a·v1 · currentpublished
Ultrafast electron crystallography reveals the atomic pathway of a light-driven correlated insulator-to-metal transition
with Arthur Niedermayr, Chin Shen Ong, Patrik Thunström, Michael Yannai +7
1 version
Preprints & journals
70 papers in the corpus · 2010–2026Ultrafast electron crystallography reveals the atomic pathway of a light-driven correlated insulator-to-metal transition2609.05747v1 · Arthur Niedermayr, Hongyi Xu, Chin Shen Ong et al.2026 · 0 citationsarXivon Valency
Tracking the redox reaction of the iron enzyme ribonucleotide reductase using continuous SerialED and SFX.42097140 · Pacoste, Laura, Kumar, Rohit, Srinivas, Vivek et al.2026 · 1 citationStructure (London, England : 1993). 2026;34(6):901-914.e6
Sub-Ångström Three-Dimensional Electron Diffraction Reveals Crystal Structures and Phase Transformations in Liquids.41996151 · Wang, Huiqiu, Lajer, Joakim, Broadhurst, Edward T et al.2026 · 4 citationsJournal of the American Chemical Society. 2026;148(16):17174-17180
Universal computational thermal imaging overcoming the ghosting effect2604.01542v1 · Hongyi Xu, Du Wang, Chenjun Zhao et al.2026 · 0 citationsarXiv
Round robin on structure analysis from 3D electron diffraction data.41685623 · Gemmi, Mauro, Palatinus, Lukáš, Boullay, Philippe et al.2026 · 5 citationsIUCrJ. 2026;13(Pt 2):198-210
Quantum refinement with electron diffraction and X-ray free-electron laser data: comparative study of ribonucleotide reductase dimetal site.41959874 · Lundgren, Kristoffer J M, Sun, Xiaoli, Pacoste, Laura et al.2026 · 0 citationsJournal of applied crystallography. 2026;59(Pt 2):277-290
Structural basis of canonical TIR-NLR activation in plant innate immunity10.64898/2026.02.03.703613v1 · Maruta, N., Gu, W., Lim, B. Y. J. et al.2026 · 1 citationbioRxiv
AutoLEI: An XDS-based pipeline with graphical user interface for automated real-time and offline batch 3D ED/microED data processing.41431443 · Wang, Lei, Chen, Yinlin, Hutchinson, Emma Scaletti et al.2026 · 3 citationsIUCrJ. 2026;13(Pt 1):105-115
Limiting the effects of radiation damage in MicroED through dose selection during data processing.41231137 · Bwanika, Henri Colyn, Zhao, Jingjing, Hofer, Gerhard et al.2025 · 1 citationActa crystallographica. Section D, Structural biology. 2025;81(Pt 12):693-707
Continuous Serial Electron Diffraction for High Quality Protein Structures10.1101/2025.09.14.676192v2 · Hofer, G., Wang, L., Pacoste, L. et al.2025 · 1 citationbioRxiv
Unveiling the Structure of Anhydrous Sodium Valproate with 3D Electron Diffraction and a Facile Sample Preparation Workflow.40585805 · Xu, Jiaoyan, Srinivas, Vivek, Kumar, Rohit et al.2025 · 6 citationsACS central science. 2025;11(6):960-966
Homogeneous 2D/3D heterostructured tin halide perovskite photovoltaics.40240673 · He, Dongxu, Chen, Peng, Steele, Julian A et al.2025 · 154 citationsNature nanotechnology. 2025;20(6):779-786
AutoLEI: An XDS-based Graphical User Interface for Automated Real-time and Offline Batch 3D ED/MicroED Data Processing10.1101/2025.04.12.648515v2 · Wang, L., Chen, Y., Scaletti Hutchinson, E. et al.2025 · 2 citationsbioRxiv
Docking stations in porous crystals unlock elusive molecular structures.40205101 · Xu, Hongyi2026 · 0 citationsNature. 2025;640(8059):604-605
A stable zeolite with atomically ordered and interconnected mesopore channel.39663489 · Lu, Peng, Xu, Jiaoyan, Sun, Yiqing et al.2024 · 110 citationsNature. 2024;636(8042):368-373
Perfect Is Perfect: Nickel Prussian Blue Analogue as A High-Efficiency Electrocatalyst for Hydrogen Peroxide Production.39175142 · Xi, Yamin, Xiang, Yitong, Zhang, Chaoqi et al.2025 · 21 citationsAngewandte Chemie (International ed. in English). 2025;64(1):e202413866
Structural characterization of TIR-domain signalosomes through a combination of structural biology approaches.39190506 · Bhatt, Akansha, Mishra, Biswa P, Gu, Weixi et al.2024 · 12 citationsIUCrJ. 2024;11(Pt 5):695-707
Microcrystal electron diffraction structure of Toll-like receptor 2 TIR-domain-nucleated MyD88 TIR-domain higher-order assembly.39268708 · Li, Y, Pacoste, L C, Gu, W et al.2024 · 5 citationsActa crystallographica. Section D, Structural biology. 2024;80(Pt 9):699-712
Visualizing Noncovalent Interactions and Property Prediction of Submicron-Sized Charge-Transfer Crystals from ab-initio Determined Structures.38528393 · Lv, Zhong-Peng, Srivastava, Divya, Conley, Kevin et al.2024 · 2 citationsSmall methods. 2024;8(7):e2301229
Phase Identification and Discovery of an Elusive Polymorph of Drug-Polymer Inclusion Complex Using Automated 3D Electron Diffraction.38380831 · Lightowler, Molly, Li, Shuting, Ou, Xiao et al.2024 · 14 citationsAngewandte Chemie (International ed. in English). 2024;63(16):e202317695
Phase identification and discovery of hidden crystal forms in a polycrystalline pharmaceutical sample using high-throughput 3D electron diffraction10.26434/chemrxiv-2023-2rh9j · Molly Lightowler, Shuting Li, Xiao Ou et al.2023 · 1 citationChemRxiv
Accurate structure models and absolute configuration determination using dynamical effects in continuous-rotation 3D electron diffraction data.37081207 · Klar, Paul B, Krysiak, Yaşar, Xu, Hongyi et al.2023 · 131 citationsNature chemistry. 2023;15(6):848-855
Direct structure determination of vemurafenib polymorphism from compact spherulites using 3D electron diffraction.36697943 · Li, Shuting, Lightowler, Molly, Ou, Xiao et al.2024 · 14 citationsCommunications chemistry. 2023;6(1):18
Improving data quality for three-dimensional electron diffraction by a post-column energy filter and a new crystal tracking method.36570655 · Yang, Taimin, Xu, Hongyi, Zou, Xiaodong2024 · 19 citationsJournal of applied crystallography. 2022;55(Pt 6):1583-1591
Supercrystal engineering of atomically precise gold nanoparticles promoted by surface dynamics.36357788 · Yao, Qiaofeng, Liu, Lingmei, Malola, Sami et al.2023 · 162 citationsNature chemistry. 2023;15(2):230-239
Direct Location of Organic Molecules in Framework Materials by Three-Dimensional Electron Diffraction.35950776 · Ge, Meng, Yang, Taimin, Xu, Hongyi et al.2024 · 27 citationsJournal of the American Chemical Society. 2022;144(33):15165-15174
Single-crystal structure determination of nanosized metal-organic frameworks by three-dimensional electron diffraction.35896741 · Yang, Taimin, Willhammar, Tom, Xu, Hongyi et al.2022 · 99 citationsNature protocols. 2022;17(10):2389-2413
Scipion-ED: a graphical user interface for batch processing and analysis of 3D ED/MicroED data.35719296 · Bengtsson, Viktor E G, Pacoste, Laura, de la Rosa-Trevin, José Miguel et al.2024 · 6 citationsJournal of applied crystallography. 2022;55(Pt 3):638-646
Indomethacin Polymorph δ Revealed To Be Two Plastically Bendable Crystal Forms by 3D Electron Diffraction: Correcting a 47-Year-Old Misunderstanding.34902212 · Lightowler, Molly, Li, Shuting, Ou, Xiao et al.2022 · 55 citationsAngewandte Chemie (International ed. in English). 2022;61(7):e202114985
Revealing the early stages of carbamazepine crystallization by cryoTEM and 3D electron diffraction.34804540 · Broadhurst, Edward T, Xu, Hongyi, Parsons, Simon et al.2023 · 24 citationsIUCrJ. 2021;8(Pt 6):860-866
Nanofluidic voidless electrode for electrochemical capacitance enhancement in gel electrolyte.34535670 · Xiao, Kefeng, Yang, Taimin, Liang, Jiaxing et al.2021 · 26 citationsNature communications. 2021;12(1):5515
A simple pressure-assisted method for MicroED specimen preparation.34413316 · Zhao, Jingjing, Xu, Hongyi, Lebrette, Hugo et al.2021 · 35 citationsNature communications. 2021;12(1):5036
Improving data quality for 3D electron diffraction (3D ED) by Gatan Image Filter and a new crystal tracking method2108.07468v1 · Taimin Yang, Hongyi Xu, Xiaodong Zou2021 · 1 citationJ. Appl. Cryst. (2022). 55, 1583-1591
A 47-year-old misunderstanding: Indomethacin Polymorph δ revealed to be two plastically bendable crystal forms by 3D electron diffraction10.26434/chemrxiv-2021-s9fhf · Molly Lightowler, Shuting Li, Xiao Ou et al.2021 · 1 citationChemRxiv
MyD88 TIR domain higher-order assembly interactions revealed by microcrystal electron diffraction and serial femtosecond crystallography.33972532 · Clabbers, Max T B, Holmes, Susannah, Muusse, Timothy W et al.2021 · 98 citationsNature communications. 2021;12(1):2578
Redetermination of the first unknown protein MicroED structure by high resolution X-ray diffraction10.1101/2021.04.07.438860v1 · Xu, H., Zou, X., Högbom, M. et al.2021 · 2 citationsbioRxiv
Macromolecular crystallography using microcrystal electron diffraction.33645535 · Clabbers, Max T B, Xu, Hongyi2021 · 17 citationsActa crystallographica. Section D, Structural biology. 2021;77(Pt 3):313-324
Multiscale Assembly of [AgS4 ] Tetrahedrons into Hierarchical Ag-S Networks for Robust Photonic Water.33475199 · Wu, Zhennan, Yao, Qiaofeng, Liu, Zhihe et al.2021 · 18 citationsAdvanced materials (Deerfield Beach, Fla.). 2021;33(8):e2006459
Microcrystal electron diffraction in macromolecular and pharmaceutical structure determination.34895659 · Clabbers, Max T B, Xu, Hongyi2021 · 21 citationsDrug discovery today. Technologies. 2020;37:93-105
Electron Beam-Induced Transformation in High-Density Amorphous Ices.32997503 · Xu, Hongyi, Ångström, Jonas, Eklund, Tobias et al.2021 · 8 citationsThe journal of physical chemistry. B. 2020;124(41):9283-9288
Synthesis and Exfoliation of a New Layered Mesoporous Zr-MOF Comprising Hexa- and Dodecanuclear Clusters as Well as a Small Organic Linker Molecule.32820922 · Leubner, Sebastian, Bengtsson, Viktor E G, Synnatschke, Kevin et al.2020 · 53 citationsJournal of the American Chemical Society. 2020;142(37):15995-16000
A Porphyrinic Zirconium Metal-Organic Framework for Oxygen Reduction Reaction: Tailoring the Spacing between Active-Sites through Chain-Based Inorganic Building Units.32786758 · Cichocka, Magdalena Ola, Liang, Zuozhong, Feng, Dawei et al.2024 · 247 citationsJournal of the American Chemical Society. 2020;142(36):15386-15395
InsteaDMatic: towards cross-platform automated continuous rotation electron diffraction.33117109 · Roslova, Maria, Smeets, Stef, Wang, Bin et al.2024 · 29 citationsJournal of applied crystallography. 2020;53(Pt 5):1217-1224
Visualizing drug binding interactions using microcrystal electron diffraction.32737395 · Clabbers, Max T B, Fisher, S Zoë, Coinçon, Mathieu et al.2021 · 31 citationsCommunications biology. 2020;3(1):417
Hexahydroxytriphenylene for the synthesis of group 13 MOFs - a new inorganic building unit in a β-cristobalite type structure.32051978 · Leubner, S, Bengtsson, V E G, Inge, A K et al.2020 · 21 citationsDalton transactions (Cambridge, England : 2003). 2020;49(10):3088-3092
Polymorph evolution during crystal growth studied by 3D electron diffraction.31949899 · Broadhurst, Edward T, Xu, Hongyi, Clabbers, Max T B et al.2025 · 41 citationsIUCrJ. 2020;7(Pt 1):5-9
Small Pore Aluminosilicate EMM-37: Synthesis and Structure Determination Using Continuous Rotation Electron Diffraction.31512862 · Kapaca, Elina, Burton, Allen, Terefenko, Eugene et al.2019 · 10 citationsInorganic chemistry. 2019;58(19):12854-12858
Solving a new R2lox protein structure by microcrystal electron diffraction.31457106 · Xu, Hongyi, Lebrette, Hugo, Clabbers, Max T B et al.2020 · 80 citationsScience advances. 2019;5(8):eaax4621
A metal-organic framework for efficient water-based ultra-low-temperature-driven cooling.31289274 · Lenzen, Dirk, Zhao, Jingjing, Ernst, Sebastian-Johannes et al.2024 · 246 citationsNature communications. 2019;10(1):3025
Absolute structure, at the nanoscale.31097652 · Xu, Hongyi, Zou, Xiaodong2019 · 14 citationsScience (New York, N.Y.). 2019;364(6441):632-633
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