DK
Dean Kleissas
q-bio.QMcs.CEelectron microscopyq-bio.NCCloud Computingcomputer visionconnectomeConnectomicscs.CVEcosystem
On Valency
published · living versionsW_qwe58ep4·v1 · currentpublished
The Open Connectome Project Data Cluster: Scalable Analysis and Vision for High-Throughput Neuroscience
with Randal Burns, William Gray Roncal, Kunal Lillaney, Priya Manavalan +15
1 version
Preprints & journals
19 papers in the corpus · 2013–2024The Brain Observatory Storage Service and Database (BossDB): A Cloud-Native Approach for Petascale Neuroscience Discovery.35242021 · Hider, Robert, Kleissas, Dean, Gion, Timothy et al.2024 · 46 citationsFrontiers in neuroinformatics. 2022;16:828787
The Open Connectome Project Data Cluster: Scalable Analysis and Vision for High-Throughput Neuroscience.24401992 · Burns, Randal, Roncal, William Gray, Kleissas, Dean et al.2023 · 57 citationsScientific and statistical database management : International Conference, SSDBM ... : proceedings. International Conference on Scientific and Statistical Database Management. 2013
Toward a scalable framework for reproducible processing of volumetric, nanoscale neuroimaging datasets.33347572 · Johnson, Erik C, Wilt, Miller, Rodriguez, Luis M et al.2021 · 7 citationsGigaScience. 2020;9(12)
Neural Reconstruction Integrity: A Metric for Assessing the Connectivity Accuracy of Reconstructed Neural Networks.30455638 · Reilly, Elizabeth P, Garretson, Jeffrey S, Gray Roncal, William R et al.2020 · 14 citationsFrontiers in neuroinformatics. 2018;12:74
Leveraging Tools from Autonomous Navigation for Rapid, Robust Neuron Connectivity10.1101/2020.04.30.070755v1 · Drenkow, N., Joyce, J., Matelsky, J. et al.2020 · 2 citationsbioRxiv
The Block Object Storage Service (bossDB): A Cloud-Native Approach for Petascale Neuroscience Discovery10.1101/217745v2 · Hider, R., Kleissas, D., Pryor, D. et al.2017 · 19 citationsbioRxiv
A community-developed open-source computational ecosystem for big neuro data.30377345 · Vogelstein, Joshua T, Perlman, Eric, Falk, Benjamin et al.2019 · 71 citationsNature methods. 2018;15(11):846-847
Toward A Reproducible, Scalable Framework for Processing Large Neuroimaging Datasets10.1101/615161v1 · Johnson, E. C., Wilt, M., Rodriguez, L. M. et al.2019 · 7 citationsbioRxiv
A Community-Developed Open-Source Computational Ecosystem for Big Neuro Data1804.02835v2 · Randal Burns, Eric Perlman, Alex Baden et al.2018 · 71 citationsarXiv
Science in the cloud (SIC): A use case in MRI connectomics.28327935 · Kiar, Gregory, Gorgolewski, Krzysztof J, Kleissas, Dean et al.2018 · 31 citationsGigaScience. 2017;6(5):1-10
Embedded clutter reduction and face detection algorithms for a visual prosthesis.28268360 · Rollend, Derek M, Rosendall, Paul E, Wolfe, Kevin C et al.2017 · 5 citationsAnnual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference. 2016;2016:411-414
Science In the Cloud (SIC): A use case in MRI Connectomics1610.08484v5 · Gregory Kiar, Krzysztof J. Gorgolewski, Dean Kleissas et al.2016 · 31 citationsarXiv
Neural Reconstruction Integrity: A metric for assessing the connectivity of reconstructed neural networks1702.02684v1 · Elizabeth P. Reilly, Jeffrey S. Garretson, William Gray Roncal et al.2017 · 1 citationarXiv
MIGRAINE: MRI Graph Reliability Analysis and Inference for Connectomics1312.4875v1 · William Gray Roncal, Zachary H. Koterba, Disa Mhembere et al.2013 · 40 citationsarXivon Valency
Bioimage Informatics for Big Data.27207370 · Peng, Hanchuan, Zhou, Jie, Zhou, Zhi et al.2016 · 8 citationsAdvances in anatomy, embryology, and cell biology. 2016;219:263-72
VESICLE: Volumetric Evaluation of Synaptic Interfaces using Computer vision at Large Scale1403.3724v4 · William Gray Roncal, Michael Pekala, Verena Kaynig-Fittkau et al.2014 · 12 citationsProceedings of the British Machine Vision Conference (BMVC), pages 81.1-81.13. BMVA Press, September 2015
An automated images-to-graphs framework for high resolution connectomics.26321942 · Gray Roncal, William R, Kleissas, Dean M, Vogelstein, Joshua T et al.2015 · 25 citationsFrontiers in neuroinformatics. 2015;9:20
Automatic Annotation of Axoplasmic Reticula in Pursuit of Connectomes1404.4800v1 · Ayushi Sinha, William Gray Roncal, Narayanan Kasthuri et al.2014 · 0 citationsarXiv
The Open Connectome Project Data Cluster: Scalable Analysis and Vision for High-Throughput Neuroscience1306.3543v2 · Randal Burns, William Gray Roncal, Dean Kleissas et al.2013 · 30 citationsarXivon Valency
Career total: 25 works. 19 are in this corpus.
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