ÉD
Édouard Duchesnay
MRIcs.CVcs.LGBrainMagnetic Resonance Imagingstat.MLNeuroimagingCADASILmagnetic resonance imagingSchizophrenia
On Valency
published · living versionsW_dwtmxhph·v1 · currentpublished
Scikit-learn: Machine Learning in Python
with Fabian Pedregosa, Gaël Varoquaux, Alexandre Gramfort, Vincent Michel +14
1 version
Preprints & journals
88 papers in the corpus · 2004–2026Automatic Discovery of Disease Subgroups by Contrasting with Healthy Controls2605.21301v1 · Robin Louiset, Edouard Duchesnay, Benoit Dufumier et al.2026 · 0 citationsarXiv
A Unified Geometric Framework for Weighted Contrastive Learning2605.13943v1 · Raphael Vock, Edouard Duchesnay, Benoit Dufumier2026 · 0 citationsarXiv
Improving clinical interpretability of linear neuroimaging models through feature whitening2604.20675v1 · Sara Petiton, Antoine Grigis, Raphael Vock et al.2026 · 0 citationsarXiv
How and why does deep ensemble coupled with transfer learning increase performance in bipolar disorder and schizophrenia classification?2604.02002v1 · Sara Petiton, Antoine Grigis, Benoit Dufumier et al.2026 · 2 citationsISBI 2024 - IEEE International Symposium on Biomedical Imaging, May 2024, Athenes, Greece
Beta power as a neural correlate of sensory features in autistic individuals.41851616 · Chaudet, Julie, Pichot, Julien, Pedoux, Amandine et al.2026 · 0 citationsJournal of neurodevelopmental disorders. 2026;18(1)
Decoding cortical folding with deep learning: toward neurodevelopmental biomarkers of psychiatric disorders.41653295 · Auriau, Pierre, Grigis, Antoine, Mangin, Jean-François et al.2026 · 0 citationsJournal of neural transmission (Vienna, Austria : 1996). 2026
Schizophrenia Following Early Adolescence Prodrome: A Neurodevelopmental Subtype With Autism-like Sensorimotor and Social Cognition Deficits.39756426 · Iftimovici, Anton, Martinez, Gilles, Victor, Julie et al.2025 · 4 citationsSchizophrenia bulletin. 2025;51(6):1581-1591
Predicting post-traumatic stress disorder in relatives of critically ill patients.40767770 · Dupont, Thibault, Duchesnay, Edouard, Pochard, Frédéric et al.2025 · 0 citationsCurrent opinion in critical care. 2025;31(5):616-623
Robust brain age estimation from structural MRI with contrastive learning2507.01794v2 · Carlo Alberto Barbano, Benoit Dufumier, Edouard Duchesnay et al.2025 · 3 citationsarXiv
Pattern of Deep Grey Matter Undersizing Boosts MRI-Based Diagnostic Classifiers in Fetal Alcohol Spectrum Disorders.40387267 · Kerdreux, Eliot, Fraize, Justine, Ntorkou, Alexandra et al.2025 · 1 citationHuman brain mapping. 2025;46(8):e70233
[Brain imaging and the first success of precision psychiatry].40418012 · Laidi, Charles, Bouaziz, Noomane, Haffen, Emmanuel et al.2025 · 0 citationsMedecine sciences : M/S. 2025;41(5):500-507
Deep learning models reveal the link between dynamic brain connectivity patterns and states of consciousness.39738114 · Gomez, Chloé, Uhrig, Lynn, Frouin, Vincent et al.2024 · 5 citationsScientific reports. 2024;14(1):31606
Revisiting the standard for modeling functional brain network activity: Application to consciousness.39680526 · Grigis, Antoine, Gomez, Chloé, Frouin, Vincent et al.2024 · 3 citationsPloS one. 2024;19(12):e0314598
Neurodevelopmental predictors of treatment response in schizophrenia and bipolar disorder.39402801 · Iftimovici, Anton, Krebs, Emma, Dalfin, William et al.2026 · 7 citationsPsychological medicine. 2024;54(13):3655-3666
Brain growth until adolescence after a neonatal focal injury: sex related differences beyond lesion effect.39247049 · Postic, Pierre-Yves, Leprince, Yann, Brosset, Soraya et al.2024 · 1 citationFrontiers in neuroscience. 2024;18:1405381
Cerebellum and social abilities: A structural and functional connectivity study in a transdiagnostic sample.38989605 · Kong, Yue, Roser, Mathilde, Bègue, Indrit et al.2024 · 9 citationsHuman brain mapping. 2024;45(10):e26749
Exploring the potential of representation and transfer learning for anatomical neuroimaging: Application to psychiatry.38848981 · Dufumier, Benoit, Gori, Pietro, Petiton, Sara et al.2024 · 15 citationsNeuroImage. 2024;296:120665
Longitudinal MicroRNA Signature of Conversion to Psychosis.37607340 · Iftimovici, Anton, He, Qin, Jiao, Chuan et al.2024 · 6 citationsSchizophrenia bulletin. 2024;50(2):363-373
Separating common from salient patterns with Contrastive Representation Learning2402.11928v1 · Robin Louiset, Edouard Duchesnay, Antoine Grigis et al.2024 · 1 citationarXiv
Attention-gated 3D CapsNet for robust hippocampal segmentation.38173654 · Poiret, Clement, Bouyeure, Antoine, Patil, Sandesh et al.2025 · 3 citationsJournal of medical imaging (Bellingham, Wash.). 2024;11(1):014003
Prediction of post-traumatic stress disorder in family members of ICU patients: a machine learning approach.38112774 · Dupont, Thibault, Kentish-Barnes, Nancy, Pochard, Frédéric et al.2024 · 30 citationsIntensive care medicine. 2024;50(1):114-124
Asynchronous neural maturation predicts transition to psychosis.37904327 · Iftimovici, Anton, Bourgin, Julie, Houenou, Josselin et al.2023 · 2 citationsPsychiatry and clinical neurosciences. 2023
SepVAE: a contrastive VAE to separate pathological patterns from healthy ones2307.06206v2 · Robin Louiset, Edouard Duchesnay, Antoine Grigis et al.2023 · 2 citationsarXiv
Correction: Understanding the relationship between cerebellar structure and social abilities.37408059 · Elandaloussi, Yannis, Floris, Dorothea L, Coupé, Pierrick et al.2023 · 0 citationsMolecular autism. 2023;14(1):24
A fast and robust hippocampal subfields segmentation: HSF revealing lifespan volumetric dynamics.37396459 · Poiret, Clement, Bouyeure, Antoine, Patil, Sandesh et al.2023 · 13 citationsFrontiers in neuroinformatics. 2023;17:1130845
Enhancing fetal alcohol spectrum disorders diagnosis with a classifier based on the intracerebellar gradient of volumetric undersizing.37209313 · Fraize, Justine, Fischer, Clara, Elmaleh-Bergès, Monique et al.2023 · 15 citationsHuman brain mapping. 2023;44(11):4321-4336
Understanding the relationship between cerebellar structure and social abilities.37189195 · Elandaloussi, Yannis, Floris, Dorothea L, Coupé, Pierrick et al.2023 · 18 citationsMolecular autism. 2023;14(1):18
Contrastive learning for regression in multi-site brain age prediction2211.08326v2 · Carlo Alberto Barbano, Benoit Dufumier, Edouard Duchesnay et al.2022 · 21 citationsarXiv
OpenBHB: a Large-Scale Multi-Site Brain MRI Data-set for Age Prediction and Debiasing.36122684 · Dufumier, Benoit, Grigis, Antoine, Victor, Julie et al.2023 · 67 citationsNeuroImage. 2022;263:119637
Integrating Prior Knowledge in Contrastive Learning with Kernel2206.01646v2 · Benoit Dufumier, Carlo Alberto Barbano, Robin Louiset et al.2022 · 3 citationsarXiv
Brain anomalies in early psychosis: From secondary to primary psychosis.35661683 · Iftimovici, Anton, Chaumette, Boris, Duchesnay, Edouard et al.2022 · 7 citationsNeuroscience and biobehavioral reviews. 2022;138:104716
Cerebellar Atypicalities in Autism?36137706 · Laidi, Charles, Floris, Dorothea L, Tillmann, Julian et al.2022 · 37 citationsBiological psychiatry. 2022;92(8):674-682
Conditional Alignment and Uniformity for Contrastive Learning with Continuous Proxy Labels2111.05643v1 · Benoit Dufumier, Pietro Gori, Julie Victor et al.2021 · 3 citationsarXiv
Irritability Is Associated With Decreased Cortical Surface Area and Anxiety With Decreased Gyrification During Brain Development.34630188 · Piguet, Camille, Mihailov, Angeline, Grigis, Antoine et al.2021 · 4 citationsFrontiers in psychiatry. 2021;12:744419
Decoding Activity in Broca's Area Predicts the Occurrence of Auditory Hallucinations Across Subjects.34742546 · Fovet, Thomas, Yger, Pierre, Lopes, Renaud et al.2022 · 28 citationsBiological psychiatry. 2022;91(2):194-201
UCSL : A Machine Learning Expectation-Maximization framework for Unsupervised Clustering driven by Supervised Learning2107.01988v1 · Robin Louiset, Pietro Gori, Benoit Dufumier et al.2021 · 6 citationsECML/PKDD 2021
Contrastive Learning with Continuous Proxy Meta-Data for 3D MRI Classification2106.08808v1 · Benoit Dufumier, Pietro Gori, Julie Victor et al.2021 · 82 citationsMICCAI 2021
Benchmarking CNN on 3D Anatomical Brain MRI: Architectures, Data Augmentation and Deep Ensemble Learning2106.01132v2 · Benoit Dufumier, Pietro Gori, Ilaria Battaglia et al.2021 · 8 citationsarXiv
What we learn about bipolar disorder from large-scale neuroimaging: Findings and future directions from the ENIGMA Bipolar Disorder Working Group.32725849 · Ching, Christopher R K, Hibar, Derrek P, Gurholt, Tiril P et al.2022 · 144 citationsHuman brain mapping. 2022;43(1):56-82
Will machine learning applied to neuroimaging in bipolar disorder help the clinician? A critical review and methodological suggestions.32108409 · Claude, Laurie-Anne, Houenou, Josselin, Duchesnay, Edouard et al.2021 · 62 citationsBipolar disorders. 2020;22(4):334-355
Accumulation of Lithium in the Hippocampus of Patients With Bipolar Disorder: A Lithium-7 Magnetic Resonance Imaging Study at 7 Tesla.32340717 · Stout, Jacques, Hozer, Franz, Coste, Arthur et al.2021 · 37 citationsBiological psychiatry. 2020;88(5):426-433
Lithium prevents grey matter atrophy in patients with bipolar disorder: an international multicenter study.31983348 · Hozer, Franz, Sarrazin, Samuel, Laidi, Charles et al.2021 · 33 citationsPsychological medicine. 2021;51(7):1201-1210
Neocortical morphometry in Huntington's disease: Indication of the coexistence of abnormal neurodevelopmental and neurodegenerative processes.32113174 · Mangin, Jean-Francois, Rivière, Denis, Duchesnay, Edouard et al.2021 · 30 citationsNeuroImage. Clinical. 2020;26:102211
Predicting the individual risk of psychosis conversion in at-risk mental state (ARMS): a multivariate model reveals the influence of nonpsychotic prodromal symptoms.31872289 · Bourgin, Julie, Duchesnay, Edouard, Magaud, Emilie et al.2020 · 14 citationsEuropean child & adolescent psychiatry. 2020;29(11):1525-1535
Correction: Widespread white matter microstructural abnormalities in bipolar disorder: evidence from mega- and meta-analyses across 3033 individuals.31527792 · Favre, Pauline, Pauling, Melissa, Stout, Jacques et al.2020 · 10 citationsNeuropsychopharmacology : official publication of the American College of Neuropsychopharmacology. 2019;44(13):2298
Cerebellar parcellation in schizophrenia and bipolar disorder.31418816 · Laidi, C, Hajek, T, Spaniel, F et al.2020 · 35 citationsActa psychiatrica Scandinavica. 2019;140(5):468-476
Prospective cohort study of early biosignatures of response to lithium in bipolar-I-disorders: overview of the H2020-funded R-LiNK initiative.31552554 · Scott, Jan, Hidalgo-Mazzei, Diego, Strawbridge, Rebecca et al.2025 · 63 citationsInternational journal of bipolar disorders. 2019;7(1):20
Widespread white matter microstructural abnormalities in bipolar disorder: evidence from mega- and meta-analyses across 3033 individuals.31434102 · Favre, Pauline, Pauling, Melissa, Stout, Jacques et al.2020 · 235 citationsNeuropsychopharmacology : official publication of the American College of Neuropsychopharmacology. 2019;44(13):2285-2293
Decreased Cortical Thickness in the Anterior Cingulate Cortex in Adults with Autism.30511125 · Laidi, Charles, Boisgontier, Jennifer, de Pierrefeu, Amicie et al.2019 · 40 citationsJournal of autism and developmental disorders. 2019;49(4):1402-1409
Identifying a neuroanatomical signature of schizophrenia, reproducible across sites and stages, using machine learning with structured sparsity.30242828 · de Pierrefeu, A, Löfstedt, T, Laidi, C et al.2019 · 28 citationsActa psychiatrica Scandinavica. 2018;138(6):571-580
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