CP
Chethan Pandarinath
neuroscienceBrain-Computer Interfacescs.LGq-bio.NCMotor Cortexmotor cortexbrain-computer interfacedynamical systemsModels, Neurologicalmotor control
On Valency
published · living versionsW_gwnb3ukw·v1 · currentpublished
LFADS - Latent Factor Analysis via Dynamical Systems
with David Sussillo, Rafal Jozefowicz, L. F. Abbott
1 version
Preprints & journals
95 papers in the corpus · 2008–2026Behavioral signature of trihexyphenidyl in the TOR1A (DYT1) knockin mouse model of dystonia.42220653 · Qader, Ahmad Abdal, Donsante, Yuping, Markowitz, Jeffrey E et al.2026 · 0 citationsDystonia (Lausanne, Switzerland). 2025;4
Myomatrix arrays for high-definition muscle recording.36865176 · Chung, Bryce, Zia, Muneeb, Thomas, Kyle A et al.2026 · 22 citationsbioRxiv : the preprint server for biology. 2023
Preparatory encoding of intended movement in the human motor cortex and implications for brain-computer interfaces.42580347 · Rigotti-Thompson, Mattia, Nason-Tomaszewski, Samuel R, Bechefsky, Payton H et al.2026 · 0 citationsCurrent biology : CB. 2026;36(17):4283-4296.e7
A mosaic of whole-body representations on the human precentral gyrus.42310450 · Deo, Darrel R, Okorokova, Elizaveta V, Pritchard, Anna L et al.2026 · 4 citationsNature. 2026;656(8128):680-687
A generalizable speech neuroprosthesis.42619707 · Fogg, Zachery M, Card, Nicholas S, Wairagkar, Maitreyee et al.2026 · 0 citationsbioRxiv : the preprint server for biology. 2026
Encoding of speech modes and loudness in ventral precentral gyrus.41986329 · Srinivasan, Aparna, Wairagkar, Maitreyee, Iacobacci, Carrina et al.2026 · 4 citationsNature communications. 2026;17(1)
Computation-through-DynamicsToolkit: Simulated datasets and quality metrics for dynamical models of neural activity10.1101/2025.02.07.637062v3 · Versteeg, C., McCart, J. D., Ostrow, M. et al.2025 · 1 citationbioRxiv
Neural decoding of speech using deep neural ensembles10.64898/2026.06.02.729705v1 · Yoon, S., Avansino, D. T., Madugula, S. et al.2026 · 0 citationsbioRxiv
Meta-learning is expressed through altered prefrontal cortical dynamics10.64898/2026.01.01.697272v3 · Sun, X., Comrie, A. E., Kahn, A. E. et al.2026 · 1 citationbioRxiv
Restoring brain-to-text communication in a person with dysarthria from pontine stroke using an intracortical brain-computer interface10.64898/2026.02.19.26346583v1 · Nason-Tomaszewski, S. R., Deevi, P. I., Rabbani, Q. et al.2026 · 3 citationsmedRxiv
Cross-brain transfer of high-performance intracortical speech and handwriting BCIs10.64898/2026.01.12.699110v1 · Levin, A. D., Avansino, D. T., Kamdar, F. B. et al.2026 · 4 citationsbioRxiv
High performance sorting of motor unit action potentials with EMUsort10.64898/2026.01.06.697952v1 · O'Connell, S., Michaels, J. A., Wang, R. et al.2026 · 0 citationsbioRxiv
Spinal interneuron population dynamics underlying flexible pattern generation.41173881 · Wimalasena, Lahiru N, Pandarinath, Chethan, AuYong, Nicholas2025 · 4 citationsNature communications. 2025;16(1):9634
Preparatory encoding of diverse features of intended movement in the human motor cortex10.1101/2025.09.24.678356v1 · Rigotti-Thompson, M., Nason-Tomaszewski, S. R., Bechefsky, P. et al.2025 · 0 citationsbioRxiv
An application-based taxonomy for brain-computer interfaces.39715900 · Robinson, Jacob T, Norman, Sumner L, Angle, Matthew R et al.2025 · 20 citationsNature biomedical engineering. 2025;9(6):789-791
Inner speech in motor cortex and implications for speech neuroprostheses.40816265 · Kunz, Erin M, Abramovich Krasa, Benyamin, Kamdar, Foram et al.2025 · 47 citationsCell. 2025;188(17):4658-4673.e17
Behavioral Signature of Trihexyphenidyl in The Tor1a (DYT1) Knockin Mouse Model of Dystonia10.1101/2025.06.17.659360v1 · Qader, A. A., Donsante, Y., Markowitz, J. E. et al.2025 · 0 citationsbioRxiv
Encoding of speech modes and loudness in ventral precentral gyrus10.1101/2025.05.30.657105v1 · Srinivasan, A., Wairagkar, M., Iacobacci, C. et al.2025 · 4 citationsbioRxiv
Pseudo-linear summation explains neural geometry of multi-finger movements in human premotor cortex.40442062 · Shah, Nishal P, Avansino, Donald, Kamdar, Foram et al.2025 · 6 citationsNature communications. 2025;16(1):5008
Diffusion-Based Generation of Neural Activity from Disentangled Latent Codes.39130199 · McCart, Jonathan D, Sedler, Andrew R, Versteeg, Christopher et al.2025 · 0 citationsArXiv. 2024
Expressive architectures enhance interpretability of dynamics-based neural population models.38699512 · Sedler, Andrew R, Versteeg, Christopher, Pandarinath, Chethan2025 · 5 citationsNeurons, behavior, data analysis, and theory. 2023;2023
Reducing power requirements for high-accuracy decoding in iBCIs.39423832 · Karpowicz, Brianna M, Bhaduri, Bareesh, Nason-Tomaszewski, Samuel R et al.2024 · 1 citationJournal of neural engineering. 2024;21(6)
Few-shot Algorithms for Consistent Neural Decoding (FALCON) Benchmark10.1101/2024.09.15.613126v2 · Karpowicz, B. M., Ye, J., Fan, C. et al.2024 · 1 citationbioRxiv
Representation of Verbal Thought in Motor Cortex and Implications for Speech Neuroprostheses10.1101/2024.10.04.616375v1 · Kunz, E. M., Meschede-Krasa, B., Kamdar, F. et al.2024 · 9 citationsbioRxiv
Expressive dynamics models with nonlinear injective readouts enable reliable recovery of latent features from neural activity.37744459 · Versteeg, Christopher, Sedler, Andrew R, McCart, Jonathan D et al.2024 · 3 citationsArXiv. 2023
A mosaic of whole-body representations in human motor cortex10.1101/2024.09.14.613041v1 · Deo, D. R., Okorokova, E. V., Pritchard, A. L. et al.2024 · 15 citationsbioRxiv
Diffusion-Based Generation of Neural Activity from Disentangled Latent Codes2407.21195v1 · Jonathan D. McCart, Andrew R. Sedler, Christopher Versteeg et al.2024 · 0 citationsarXiv
Spinal interneuron population dynamics underlying flexible pattern generation10.1101/2024.06.20.599927v1 · Wimalasena, L. N., Pandarinath, C., Au Yong, N.2024 · 6 citationsbioRxiv
Identifying Distinct Neural Features between the Initial and Corrective Phases of Precise Reaching Using AutoLFADS.38538142 · Lee, Wei-Hsien, Karpowicz, Brianna M, Pandarinath, Chethan et al.2024 · 5 citationsThe Journal of neuroscience : the official journal of the Society for Neuroscience. 2024;44(20)
BRAND: a platform for closed-loop experiments with deep network models.38579696 · Ali, Yahia H, Bodkin, Kevin, Rigotti-Thompson, Mattia et al.2024 · 34 citationsJournal of neural engineering. 2024;21(2)
Identifying distinct neural features between the initial and corrective phases of precise reaching using AutoLFADS10.1101/2023.06.30.547252v2 · Lee, W.-H., Karpowicz, B. M., Pandarinath, C. et al.2023 · 5 citationsbioRxiv
Myomatrix arrays for high-definition muscle recording.38113081 · Chung, Bryce, Zia, Muneeb, Thomas, Kyle A et al.2023 · 34 citationseLife. 2023;12
Pseudo-linear Summation explains Neural Geometry of Multi-finger Movements in Human Premotor Cortex10.1101/2023.10.11.561982v1 · Shah, N. P., Avansino, D., Kamdar, F. et al.2023 · 17 citationsbioRxiv
Expressive dynamics models with nonlinear injective readouts enable reliable recovery of latent features from neural activity2309.06402v1 · Christopher Versteeg, Andrew R. Sedler, Jonathan D. McCart et al.2023 · 3 citationsarXiv
lfads-torch: A modular and extensible implementation of latent factor analysis via dynamical systems2309.01230v1 · Andrew R. Sedler, Chethan Pandarinath2023 · 0 citationsarXiv
BRAND: A platform for closed-loop experiments with deep network models10.1101/2023.08.08.552473v1 · Ali, Y. H., Bodkin, K., Rigotti-Thompson, M. et al.2023 · 35 citationsbioRxiv
High-performance neural population dynamics modeling enabled by scalable computational infrastructure.37520691 · Patel, Aashish N, Sedler, Andrew R, Huang, Jingya et al.2023 · 3 citationsJournal of open source software. 2023;8(83)
Representation learning for neural population activity with Neural Data Transformers2108.01210v1 · Joel Ye, Chethan Pandarinath2021 · 47 citationsarXiv
Expressive architectures enhance interpretability of dynamics-based neural population models2212.03771v4 · Andrew R. Sedler, Christopher Versteeg, Chethan Pandarinath2022 · 5 citationsarXiv
A deep learning framework for inference of single-trial neural population dynamics from calcium imaging with subframe temporal resolution.36424431 · Zhu, Feng, Grier, Harrison A, Tandon, Raghav et al.2022 · 41 citationsNature neuroscience. 2022;25(12):1724-1734
A large-scale neural network training framework for generalized estimation of single-trial population dynamics.36443486 · Keshtkaran, Mohammad Reza, Sedler, Andrew R, Chowdhury, Raeed H et al.2022 · 92 citationsNature methods. 2022;19(12):1572-1577
Stabilizing brain-computer interfaces through alignment of latent dynamics10.1101/2022.04.06.487388v2 · Karpowicz, B. M., Ali, Y. H., Wimalasena, L. N. et al.2022 · 77 citationsbioRxiv
A large-scale neural network training framework for generalized estimation of single-trial population dynamics10.1101/2021.01.13.426570v2 · Keshtkaran, M. R., Sedler, A. R., Chowdhury, R. H. et al.2021 · 92 citationsbioRxiv
Estimating muscle activation from EMG using deep learning-based dynamical systems models.35366649 · Wimalasena, Lahiru N, Braun, Jonas F, Keshtkaran, Mohammad Reza et al.2022 · 23 citationsJournal of neural engineering. 2022;19(3)
A deep learning framework for inference of single-trial neural population dynamics from calcium imaging with sub-frame temporal resolution10.1101/2021.11.21.469441v3 · Zhu, F., Grier, H. A., Tandon, R. et al.2021 · 5 citationsbioRxiv
The science and engineering behind sensitized brain-controlled bionic hands.34541898 · Pandarinath, Chethan, Bensmaia, Sliman J2022 · 86 citationsPhysiological reviews. 2022;102(2):551-604
Neural Latents Benchmark '21: Evaluating latent variable models of neural population activity2109.04463v4 · Felix Pei, Joel Ye, David Zoltowski et al.2021 · 44 citationsarXiv
Estimating muscle activation from EMG using deep learning-based dynamical systems models10.1101/2021.12.01.470827v1 · Wimalasena, L. N., Braun, J. F., Keshtkaran, M. R. et al.2021 · 23 citationsbioRxiv
Deep inference of latent dynamics with spatio-temporal super-resolution using selective backpropagation through time2111.00070v1 · Feng Zhu, Andrew R. Sedler, Harrison A. Grier et al.2021 · 7 citationsarXiv
Representation learning for neural population activity with Neural Data Transformers10.1101/2021.01.16.426955v3 · Ye, J., Pandarinath, C.2021 · 47 citationsbioRxiv
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