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cs.DSAlgorithmscs.DMModels, ChemicalSoftwareDatabases, GeneticModels, MolecularArtificial IntelligenceDatabases, ProteinGenome

On Valency

published · living versions
W_ubhsafxa·v1 · currentpublished
Layering and reverse extension for weighted kk-path vertex cover
with Jiajing Wu, An Zhang, Shiming Li
1 version

Preprints & journals

78 papers in the corpus · 2002–2025
An improved local search based algorithm for k−k^--star partition2508.09361v1 · Mingyang Gong, Guohui Lin, Brendan Mumey2025 · 0 citationsarXiv
Pre-trained protein language model for codon optimization2412.10411v1 · Shashank Pathak, Guohui Lin2024 · 0 citationsarXiv
Approximation algorithms for non-sequential star packing problems2411.11136v1 · Mengyuan Hu, An Zhang, Yong Chen et al.2024 · 1 citationarXiv
Approximately covering vertices by order-55 or longer paths2408.11225v1 · Mingyang Gong, Zhi-Zhong Chen, Guohui Lin et al.2024 · 1 citationarXiv
Intensity-dependent mass search for improving metabolite database matches in chemical isotope labeling LC-QTOF-MS-based metabolomics.37355326 · Li, Yunong, Li, Hao, Luo, Taibo et al.2023 · 10 citationsAnalytica chimica acta. 2023;1272:341467
Machine learning classification of plant genotypes grown under different light conditions through the integration of multi-scale time-series data.37333861 · Sakeef, Nazmus, Scandola, Sabine, Kennedy, Curtis et al.2023 · 25 citationsComputational and structural biotechnology journal. 2023;21:3183-3195
Randomized algorithms for fully online multiprocessor scheduling with testing2305.01605v2 · Mingyang Gong, Zhi-Zhong Chen, Guohui Lin et al.2023 · 0 citationsarXiv
An Approximation Algorithm for Covering Vertices by 4^+-Paths2304.12779v1 · Mingyang Gong, Zhi-Zhong Chen, Guohui Lin et al.2023 · 5 citationsarXiv
Approximation algorithms for covering vertices by long paths2208.03294v1 · Mingyang Gong, Brett Edgar, Jing Fan et al.2022 · 7 citationsarXiv
An efficient polynomial-time approximation scheme for parallel multi-stage open shops2205.14407v1 · Jianming Dong, Ruyan Jin, Guohui Lin et al.2022 · 0 citationsarXiv
Approximation algorithms for the directed path partition problems2107.04699v1 · Yong Chen, Zhi-Zhong Chen, Curtis Kennedy et al.2021 · 3 citationsarXiv
Quantitative and Qualitative Analysis of Atherosclerotic Stenosis in the Middle Cerebral Artery Using High-Resolution Magnetic Resonance Imaging.33023323 · Lin, Guo-Hui, Song, Jian-Xun, Fu, Nian-Xia et al.2021 · 23 citationsCanadian Association of Radiologists journal = Journal l'Association canadienne des radiologistes. 2021;72(4):783-788
Approximation algorithms for maximally balanced connected graph partition1910.02470v1 · Yong Chen, Zhi-Zhong Chen, Guohui Lin et al.2019 · 9 citationsarXiv
On Computing a Center Persistence Diagram1910.01753v2 · Yuya Higashikawa, Naoki Katoh, Guohui Lin et al.2019 · 2 citationsarXiv
A local search 4/34/3-approximation algorithm for the minimum 33-path partition problem1812.09353v1 · Yong Chen, Randy Goebel, Guohui Lin et al.2018 · 9 citationsarXiv
Improved approximation algorithms for path vertex covers in regular graphs1811.01162v1 · An Zhang, Yong Chen, Zhi-Zhong Chen et al.2018 · 6 citationsarXiv
Approximation algorithms for the three-machine proportionate mixed shop scheduling1809.05745v1 · Longcheng Liu, Yong Chen, Jianming Dong et al.2018 · 6 citationsarXiv
Diagnostic value of blood parameters for community-acquired pneumonia.30144639 · Huang, Yukai, Liu, Aihua, Liang, Ling et al.2019 · 128 citationsInternational immunopharmacology. 2018;64:10-15
Approximation algorithms for two-machine flow-shop scheduling with a conflict graph1803.02862v1 · Yinhui Cai, Guangting Chen, Yong Chen et al.2018 · 9 citationsarXiv
A local search 2.917-approximation algorithm for duo-preservation string mapping1702.01877v1 · Yao Xu, Yong Chen, Taibo Luo et al.2017 · 1 citationarXiv
On rescheduling due to machine disruption while to minimize the total weighted completion time1701.07498v1 · Wenchang Luo, Taibo Luo, Randy Goebel et al.2017 · 1 citationarXiv
Parallel Metabolomic Profiling of Cerebrospinal Fluid and Serum for Identifying Biomarkers of Injury Severity after Acute Human Spinal Cord Injury.27966539 · Wu, Yiman, Streijger, Femke, Wang, Yining et al.2018 · 51 citationsScientific reports. 2016;6:38718
Approximation algorithms for the maximum weight internal spanning tree problem1608.03299v2 · Zhi-Zhong Chen, Guohui Lin, Lusheng Wang et al.2016 · 8 citationsarXiv
Single machine scheduling with job-dependent machine deterioration1606.04157v1 · Wenchang Luo, Yao Xu, Weitian Tong et al.2016 · 14 citationsProceedings of ISAAC 2016, LIPIcs55, pages 1-13
Approximation algorithms for the vertex happiness1606.03185v2 · Yao Xu, Peng Zhang, Randy Goebel et al.2016 · 0 citationsarXiv
Whole genome SNP genotype piecemeal imputation.26498158 · Wang, Yining, Wylie, Tim, Stothard, Paul et al.2016 · 4 citationsBMC bioinformatics. 2015;16:340
MyCompoundID MS/MS Search: Metabolite Identification Using a Library of Predicted Fragment-Ion-Spectra of 383,830 Possible Human Metabolites.26415007 · Huan, Tao, Tang, Chenqu, Li, Ronghong et al.2016 · 105 citationsAnalytical chemistry. 2015;87(20):10619-26
DnsID in MyCompoundID for rapid identification of dansylated amine- and phenol-containing metabolites in LC-MS-based metabolomics.26327437 · Huan, Tao, Wu, Yiman, Tang, Chenqu et al.2016 · 110 citationsAnalytical chemistry. 2015;87(19):9838-45
Isomorphism and similarity for 2-generation pedigrees.25860335 · Jiang, Haitao, Lin, Guohui, Tong, Weitian et al.2015 · 3 citationsBMC bioinformatics. 2015;16 Suppl 5:S7
An approximation algorithm for the Bandpass-2 problem1307.7089v1 · Weitian Tong, Zhi-Zhong Chen, Lusheng Wang et al.2013 · 3 citationsarXiv
Algorithms for Cut Problems on Trees1304.3653v1 · Iyad Kanj, Guohui Lin, Tian Liu et al.2013 · 6 citationsarXiv
MyCompoundID: using an evidence-based metabolome library for metabolite identification.23373753 · Li, Liang, Li, Ronghong, Zhou, Jianjun et al.2014 · 228 citationsAnalytical chemistry. 2013;85(6):3401-8
Whole genome identity-by-descent determination.23600820 · Sabaa, Hadi, Cai, Zhipeng, Wang, Yining et al.2013 · 11 citationsJournal of bioinformatics and computational biology. 2013;11(2):1350002
Protein-chemical interaction prediction via kernelized sparse learning SVM.23424110 · Shi, Yi, Zhang, Xinhua, Liao, Xiaoping et al.2013 · 7 citationsPacific Symposium on Biocomputing. Pacific Symposium on Biocomputing. 2013:41-52
Fast accurate missing SNP genotype local imputation.22863359 · Wang, Yining, Cai, Zhipeng, Stothard, Paul et al.2013 · 25 citationsBMC research notes. 2012;5:404
Resolution-by-proxy: a simple measure for assessing and comparing the overall quality of NMR protein structures.22678091 · Berjanskii, Mark, Zhou, Jianjun, Liang, Yongjie et al.2012 · 67 citationsJournal of biomolecular NMR. 2012;53(3):167-80
Finding the nearest neighbors in biological databases using less distance computations.21030734 · Zhou, Jianjun, Sander, Jörg, Cai, Zhipeng et al.2011 · 10 citationsIEEE/ACM transactions on computational biology and bioinformatics. 2010;7(4):669-80
PROSESS: a protein structure evaluation suite and server.20460469 · Berjanskii, Mark, Liang, Yongjie, Zhou, Jianjun et al.2010 · 99 citationsNucleic acids research. 2010;38(Web Server issue):W633-40
On the parameterized complexity of pooling design.19772384 · Cheng, Yongxi, Du, Ding-Zhu, Ko, Ker-I et al.2010 · 8 citationsJournal of computational biology : a journal of computational molecular cell biology. 2009;16(11):1529-37
Isotope pattern vector based tandem mass spectral data calibration for improved peptide and protein identification.19813282 · Zhang, Jingfen, Xu, Dong, Gao, Wen et al.2010 · 5 citationsRapid communications in mass spectrometry : RCM. 2009;23(21):3448-56
Most parsimonious haplotype allele sharing determination.19379528 · Cai, Zhipeng, Sabaa, Hadi, Wang, Yining et al.2009 · 24 citationsBMC bioinformatics. 2009;10:115
ComPhy: prokaryotic composite distance phylogenies inferred from whole-genome gene sets.19208152 · Lin, Guan Ning, Cai, Zhipeng, Lin, Guohui et al.2009 · 16 citationsBMC bioinformatics. 2009;10 Suppl 1:S5
A first generation whole genome RH map of the river buffalo with comparison to domestic cattle.19108729 · Amaral, M Elisabete J, Grant, Jason R, Riggs, Penny K et al.2009 · 98 citationsBMC genomics. 2008;9:631
Ubiquitous reassortments in influenza A viruses.18942162 · Wan, Xiu-Feng, Ozden, Mufit, Lin, Guohui2009 · 9 citationsJournal of bioinformatics and computational biology. 2008;6(5):981-99
Career total: 290 works. 78 are in this corpus.Showing the 50 most recent.

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