YF
Yoav Freund
cs.LGstat.MLcs.AIcs.CVAlgorithmsArtificial Intelligencecs.SDq-bio.GNq-bio.NCCell Adhesion
On Valency
published · living versionsW_73pumvjw·v1 · currentpublished
Preprints & journals
49 papers in the corpus · 2004–2026Inference and validation of causal genetic interactions in aging human fibroblasts10.64898/2026.10.21.760791v1 · Krieger, M. S., Milanova, D., Thompson, D. et al.2026 · 0 citationsbioRxiv
A second order regret bound for NormalHedge2602.08151v1 · Yoav Freund, Nicholas J. A. Harvey, Victor S. Portella et al.2026 · 0 citationsarXiv
Towards Explainable Automated Neuroanatomy2404.05814v1 · Kui Qian, Litao Qiao, Beth Friedman et al.2024 · 1 citationarXiv
CellBoost: A pipeline for machine assisted annotation in Neuroanatomy.38293051 · Qian, Kui, Friedman, Beth, Takatoh, Jun et al.2025 · 2 citationsbioRxiv : the preprint server for biology. 2024
Effective resistance in metric spaces2306.15649v1 · Robi Bhattacharjee, Alexander Cloninger, Yoav Freund et al.2023 · 0 citationsarXiv
Active learning using region-based sampling2303.02721v1 · Sanjoy Dasgupta, Yoav Freund2023 · 0 citationsarXiv
Structure from Voltage2203.00063v2 · Robi Bhattacharjee, Alex Cloninger, Yoav Freund et al.2022 · 0 citationsarXiv
When is the Convergence Time of Langevin Algorithms Dimension Independent? A Composite Optimization Viewpoint2110.01827v1 · Yoav Freund, Yi-An Ma, Tong Zhang2021 · 1 citationarXiv
StreaMRAK a Streaming Multi-Resolution Adaptive Kernel Algorithm2108.10411v2 · Andreas Oslandsbotn, Zeljko Kereta, Valeriya Naumova et al.2021 · 1 citationarXiv
Optimal Online Learning using Potential Functions2106.10717v6 · Yoav Freund2021 · 0 citationsarXiv
Audio scene monitoring using redundant ad-hoc microphone array networks2103.01830v2 · Peter Gerstoft, Yihan Hu, Michael J. Bianco et al.2021 · 15 citationsarXiv
Experimental Design for Bathymetry Editing2007.07495v1 · Julaiti Alafate, Yoav Freund, David T. Sandwell et al.2020 · 0 citationsarXiv
An adaptive nearest neighbor rule for classification1905.12717v1 · Akshay Balsubramani, Sanjoy Dasgupta, Yoav Freund et al.2019 · 20 citationsarXiv
An active texture-based digital atlas enables automated mapping of structures and markers across brains.30858600 · Chen, Yuncong, McElvain, Lauren E, Tolpygo, Alexander S et al.2019 · 33 citationsNature methods. 2019;16(4):341-350
Faster Boosting with Smaller Memory1901.09047v3 · Julaiti Alafate, Yoav Freund2019 · 5 citationsarXiv
Tell Me Something New: A New Framework for Asynchronous Parallel Learning1805.07483v2 · Julaiti Alafate, Yoav Freund2018 · 0 citationsarXiv
Robust Landmark Detection for Alignment of Mouse Brain Section Images1803.03420v1 · Yuncong Chen, David Kleinfeld, Martyn Goulding et al.2018 · 0 citationsarXiv
The Active Atlas: Combining 3D Anatomical Models with Texture Detectors1702.08606v3 · Yuncong Chen, Lauren McElvain, Alex Tolpygo et al.2017 · 1 citationarXiv
Muffled Semi-Supervised Learning1605.08833v1 · Akshay Balsubramani, Yoav Freund2016 · 0 citationsarXiv
Typical Stability1604.03336v2 · Raef Bassily, Yoav Freund2016 · 5 citationsarXiv
Optimal Binary Classifier Aggregation for General Losses1510.00452v5 · Akshay Balsubramani, Yoav Freund2015 · 3 citationsarXiv
Scalable Semi-Supervised Aggregation of Classifiers1506.05790v2 · Akshay Balsubramani, Yoav Freund2015 · 10 citationsarXiv
Optimally Combining Classifiers Using Unlabeled Data1503.01811v3 · Akshay Balsubramani, Yoav Freund2015 · 17 citationsarXiv
The Fast Convergence of Incremental PCA1501.03796v1 · Akshay Balsubramani, Sanjoy Dasgupta, Yoav Freund2015 · 98 citationsarXiv
PAC-Bayes with Minimax for Confidence-Rated Transduction1501.03838v1 · Akshay Balsubramani, Yoav Freund2015 · 0 citationsarXiv
Co-adaptation in a Handwriting Recognition System1409.2897v1 · Sunsern Cheamanunkul, Yoav Freund2014 · 1 citationarXiv
Non-Convex Boosting Overcomes Random Label Noise1409.2905v1 · Sunsern Cheamanunkul, Evan Ettinger, Yoav Freund2014 · 4 citationsarXiv
An Online Learning-based Framework for Tracking1203.3471v1 · Kamalika Chaudhuri, Yoav Freund, Daniel Hsu2012 · 4 citationsarXiv
An online learning approach to occlusion boundary detection.21788193 · Jacobson, Natan, Freund, Yoav, Nguyen, Truong Q2012 · 13 citationsIEEE transactions on image processing : a publication of the IEEE Signal Processing Society. 2012;21(1):252-61
Automatic identification of fluorescently labeled brain cells for rapid functional imaging.20610792 · Valmianski, Ilya, Shih, Andy Y, Driscoll, Jonathan D et al.2011 · 53 citationsJournal of neurophysiology. 2010;104(3):1803-11
Towards automated high-throughput screening of C. elegans on agar1003.4287v1 · Mayank Kabra, Annie L. Conery, Eyleen J. O'Rourke et al.2010 · 1 citationarXiv
Particle Filtering on the Audio Localization Manifold1003.0659v2 · Evan Ettinger, Yoav Freund2010 · 0 citationsarXiv
Minimizing off-target signals in RNA fluorescent in situ hybridization.20164092 · Arvey, Aaron, Hermann, Anita, Hsia, Cheryl C et al.2010 · 28 citationsNucleic acids research. 2010;38(10):e115
Visualization of individual Scr mRNAs during Drosophila embryogenesis yields evidence for transcriptional bursting.19931455 · Paré, Adam, Lemons, Derek, Kosman, Dave et al.2010 · 117 citationsCurrent biology : CB. 2009;19(23):2037-42
ResBoost: characterizing and predicting catalytic residues in enzymes.19558703 · Alterovitz, Ron, Arvey, Aaron, Sankararaman, Sriram et al.2009 · 20 citationsBMC bioinformatics. 2009;10:197
A more robust boosting algorithm0905.2138v1 · Yoav Freund2009 · 90 citationsarXiv
A method for Hedging in continuous time0904.3356v3 · Yoav Freund2009 · 3 citationsarXiv
A parameter-free hedging algorithm0903.2851v2 · Kamalika Chaudhuri, Yoav Freund, Daniel Hsu2009 · 92 citationsarXivon Valency
Tracking using explanation-based modeling0903.2862v2 · Kamalika Chaudhuri, Yoav Freund, Daniel Hsu2009 · 3 citationsarXiv
Image-based crystal detection: a machine-learning approach.19018095 · Liu, Roy, Freund, Yoav, Spraggon, Glen2009 · 42 citationsActa crystallographica. Section D, Biological crystallography. 2008;64(Pt 12):1187-95
A new Hedging algorithm and its application to inferring latent random variables0806.4802v1 · Yoav Freund, Daniel Hsu2008 · 5 citationsarXiv
Random projection trees for vector quantization0805.1390v1 · Sanjoy Dasgupta, Yoav Freund2008 · 120 citationsarXiv
Lamellipodial actin mechanically links myosin activity with adhesion-site formation.17289574 · Giannone, Grégory, Dubin-Thaler, Benjamin J, Rossier, Olivier et al.2007 · 509 citationsCell. 2007;128(3):561-75
Motif Discovery through Predictive Modeling of Gene Regulationq-bio/0701021v1 · Manuel Middendorf, Anshul Kundaje, Mihir Shah et al.2007 · 26 citationsResearch in Computational Molecular Biology 2005
Identifying metabolic enzymes with multiple types of association evidence.16571130 · Kharchenko, Peter, Chen, Lifeng, Freund, Yoav et al.2006 · 99 citationsBMC bioinformatics. 2006;7:177
A classification-based framework for predicting and analyzing gene regulatory response.16723008 · Kundaje, Anshul, Middendorf, Manuel, Shah, Mihir et al.2006 · 16 citationsBMC bioinformatics. 2006;7 Suppl 1:S5
Profile-based string kernels for remote homology detection and motif extraction.16108083 · Kuang, Rui, Ie, Eugene, Wang, Ke et al.2005 · 193 citationsJournal of bioinformatics and computational biology. 2005;3(3):527-50
Predicting genetic regulatory response using classification.15262804 · Middendorf, Manuel, Kundaje, Anshul, Wiggins, Chris et al.2007 · 90 citationsBioinformatics (Oxford, England). 2004;20 Suppl 1:i232-40
Profile-based string kernels for remote homology detection and motif extraction.16448009 · Kuang, Rui, Ie, Eugene, Wang, Ke et al.2006 · 73 citationsProceedings. IEEE Computational Systems Bioinformatics Conference. 2004:152-60
Career total: 209 works. 49 are in this corpus.
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