SG
S. M. Gogarten
Genome-Wide Association StudygeneticsGenetic Predisposition to Diseaseastro-ph.COPolymorphism, Single NucleotideSoftwareastro-phGenetic Variationastro-ph.GAgenomics
On Valency
published · living versionsW_9ht9ahxh·v1 · currentpublished
The Panchromatic Hubble Andromeda Treasury
with J. J. Dalcanton, B. F. Williams, D. Lang, T. R. Lauer +28
1 version
W_r48hexa4·v1published
Preprints & journals
92 papers in the corpus · 2005–2026Large language model-based bibliometric evaluation of population descriptors in human genetics.42856267 · Gogarten, Stephanie M, Martschenko, Daphne O, Patel, Roshni et al.2026 · 0 citationsbioRxiv : the preprint server for biology. 2026
Building an Interoperable Rare Disease Multi-omic Resource: The GREGoR Data Model and Dataset.42239344 · Heavner, B D, Wheeler, M M, Bengtsson, J D et al.2026 · 1 citationbioRxiv : the preprint server for biology. 2026
Human Genome Diversity Project data use and implications for the governance of legacy genomic data.41286105 · Nelson, Sarah C, Gogarten, Stephanie M, Dahlquist, Jacklyn M et al.2026 · 3 citationsNature genetics. 2025;57(12):2937-2941
Recommendations for responsible use of population descriptors in polygenic risk score development.41286102 · Smith, Johanna L, Adebamowo, Clement A, Adebamowo, Sally N et al.2025 · 6 citationsNature genetics. 2025;57(12):2962-2971
Multi-ancestry meta-analysis identifies genetic modifiers of age-at-onset of Alzheimer's disease at known and novel loci.40883957 · Blue, Elizabeth E, Broome, Jai, Xue, Diane et al.2025 · 1 citationAlzheimer's & dementia : the journal of the Alzheimer's Association. 2025;21(9):e70489
A data model for population descriptors in genomic research.40513563 · Khan, Alyna T, Adebamowo, Clement, Fullerton, Stephanie M et al.2025 · 2 citationsAmerican journal of human genetics. 2025;112(7):1504-1514
The PRIMED Consortium: Reducing disparities in polygenic risk assessment.39561770 · Kullo, Iftikhar J, Conomos, Matthew P, Nelson, Sarah C et al.2024 · 38 citationsAmerican journal of human genetics. 2024;111(12):2594-2606
Genetics of Latin American Diversity Project: Insights into population genetics and association studies in admixed groups in the Americas.39486408 · Borda, Victor, Loesch, Douglas P, Guo, Bing et al.2024 · 32 citationsCell genomics. 2024;4(11):100692
Admix-kit: An Integrated Toolkit and Pipeline for Genetic Analyses of Admixed Populations.37873338 · Hou, Kangcheng, Gogarten, Stephanie, Kim, Joohyun et al.2025 · 23 citationsbioRxiv : the preprint server for biology. 2023
Whole Genome Sequencing Based Analysis of Inflammation Biomarkers in the Trans-Omics for Precision Medicine (TOPMed) Consortium.37745480 · Jiang, Min-Zhi, Gaynor, Sheila M, Li, Xihao et al.2026 · 3 citationsbioRxiv : the preprint server for biology. 2023
Building a collaborative cloud platform to accelerate heart, lung, blood, and sleep research.37192819 · Ahalt, Stan, Avillach, Paul, Boyles, Rebecca et al.2023 · 20 citationsJournal of the American Medical Informatics Association : JAMIA. 2023;30(7):1293-1300
Whole Genome Analysis of Venous Thromboembolism: the Trans-Omics for Precision Medicine Program.36960714 · Seyerle, Amanda A, Laurie, Cecelia A, Coombes, Brandon J et al.2023 · 12 citationsCirculation. Genomic and precision medicine. 2023;16(2):e003532
Genetics of Latin American Diversity (GLAD) Project: insights into population genetics and association studies in recently admixed groups in the Americas10.1101/2023.01.07.522490v2 · Borda, V., Loesch, D. P., Guo, B. et al.2023 · 7 citationsbioRxiv
Erratum: Ancestral diversity improves discovery and fine-mapping of genetic loci for anthropometric traits-The Hispanic/Latino Anthropometry Consortium.36268164 · Fernández-Rhodes, Lindsay, Graff, Mariaelisa, Buchanan, Victoria L et al.2024 · 3 citationsHGG advances. 2023;4(1):100149
Social and scientific motivations to move beyond groups in allele frequencies: The TOPMed experience.36055210 · Nelson, Sarah C, Gogarten, Stephanie M, Fullerton, Stephanie M et al.2022 · 6 citationsAmerican journal of human genetics. 2022;109(9):1582-1590
Recommendations on the use and reporting of race, ethnicity, and ancestry in genetic research: Experiences from the NHLBI TOPMed program.36119389 · Khan, Alyna T, Gogarten, Stephanie M, McHugh, Caitlin P et al.2024 · 103 citationsCell genomics. 2022;2(8)
Accounting for population structure in genetic studies of cystic fibrosis.35647563 · Kingston, Hanley, Stilp, Adrienne M, Gordon, William et al.2024 · 7 citationsHGG advances. 2022;3(3):100117
Ancestral diversity improves discovery and fine-mapping of genetic loci for anthropometric traits-The Hispanic/Latino Anthropometry Consortium.35399580 · Fernández-Rhodes, Lindsay, Graff, Mariaelisa, Buchanan, Victoria L et al.2026 · 33 citationsHGG advances. 2022;3(2):100099
Association of clonal hematopoiesis with chronic obstructive pulmonary disease.34855941 · Miller, Peter G, Qiao, Dandi, Rojas-Quintero, Joselyn et al.2022 · 235 citationsBlood. 2022;139(3):357-368
Genetic determinants of telomere length from 109,122 ancestrally diverse whole-genome sequences in TOPMed.35530816 · Taub, Margaret A, Conomos, Matthew P, Keener, Rebecca et al.2026 · 82 citationsCell genomics. 2022;2(1)
Genome-wide association study of body fat distribution traits in Hispanics/Latinos from the HCHS/SOL.34165540 · Justice, Anne E, Young, Kristin, Gogarten, Stephanie M et al.2022 · 13 citationsHuman molecular genetics. 2021;30(22):2190-2204
Recommendations on the use and reporting of race, ethnicity, and ancestry in genetic research: experiences from the NHLBI Trans-Omics for Precision Medicine (TOPMed) program2108.07858v1 · Alyna T. Khan, Stephanie M. Gogarten, Caitlin P. McHugh et al.2021 · 4 citationsarXiv
Identification of novel and rare variants associated with handgrip strength using whole genome sequence data from the NHLBI Trans-Omics in Precision Medicine (TOPMed) Program.34214102 · Sarnowski, Chloé, Chen, Han, Biggs, Mary L et al.2021 · 9 citationsPloS one. 2021;16(7):e0253611
BinomiRare: A robust test for association of a rare genetic variant with a binary outcome for mixed models and any case-control proportion.34337551 · Sofer, Tamar, Lee, Jiwon, Kurniansyah, Nuzulul et al.2025 · 5 citationsHGG advances. 2021;2(3)
Variant-specific inflation factors for assessing population stratification at the phenotypic variance level.34108454 · Sofer, Tamar, Zheng, Xiuwen, Laurie, Cecelia A et al.2021 · 20 citationsNature communications. 2021;12(1):3506
Identification of putative causal loci in whole-genome sequencing data via knockoff statistics.34035245 · He, Zihuai, Liu, Linxi, Wang, Chen et al.2021 · 35 citationsNature communications. 2021;12(1):3152
Author Correction: Inherited causes of clonal haematopoiesis in 97,691 whole genomes.33707633 · Bick, Alexander G, Weinstock, Joshua S, Nandakumar, Satish K et al.2026 · 5 citationsNature. 2021;591(7851):E27
Sequencing of 53,831 diverse genomes from the NHLBI TOPMed Program.33568819 · Taliun, Daniel, Harris, Daniel N, Kessler, Michael D et al.2021 · 2,199 citationsNature. 2021;590(7845):290-299
Inherited causes of clonal haematopoiesis in 97,691 whole genomes.33057201 · Bick, Alexander G, Weinstock, Joshua S, Nandakumar, Satish K et al.2021 · 731 citationsNature. 2020;586(7831):763-768
Multi-ancestry GWAS of the electrocardiographic PR interval identifies 202 loci underlying cardiac conduction.32439900 · Ntalla, Ioanna, Weng, Lu-Chen, Cartwright, James H et al.2020 · 108 citationsNature communications. 2020;11(1):2542
Population Stratification at the Phenotypic Variance level and Implication for the Analysis of Whole Genome Sequencing Data from Multiple Studies10.1101/2020.03.03.973420v1 · Sofer, T., Zheng, X., Laurie, C. A. et al.2020 · 3 citationsbioRxiv
Allelic Heterogeneity at the CRP Locus Identified by Whole-Genome Sequencing in Multi-ancestry Cohorts.31883642 · Raffield, Laura M, Iyengar, Apoorva K, Wang, Biqi et al.2020 · 13 citationsAmerican journal of human genetics. 2020;106(1):112-120
Genetic association testing using the GENESIS R/Bioconductor package.31329242 · Gogarten, Stephanie M, Sofer, Tamar, Chen, Han et al.2020 · 445 citationsBioinformatics (Oxford, England). 2019;35(24):5346-5348
Inherited Causes of Clonal Hematopoiesis of Indeterminate Potential in TOPMed Whole Genomes10.1101/782748v1 · Bick, A. G., Weinstock, J., Nandakumar, S. K. et al.2019 · 24 citationsbioRxiv
Novel genetic determinants of telomere length from a trans-ethnic analysis of 109,122 whole genome sequences in TOPMed10.1101/749010v2 · Taub, M. A., Conomos, M., Keener, R. L. et al.2019 · 6 citationsbioRxiv
Novel Common Genetic Susceptibility Loci for Colorectal Cancer.29917119 · Schmit, Stephanie L, Edlund, Christopher K, Schumacher, Fredrick R et al.2020 · 176 citationsJournal of the National Cancer Institute. 2019;111(2):146-157
A fully adjusted two-stage procedure for rank-normalization in genetic association studies.30653739 · Sofer, Tamar, Zheng, Xiuwen, Gogarten, Stephanie M et al.2019 · 87 citationsGenetic epidemiology. 2019;43(3):263-275
Efficient Variant Set Mixed Model Association Tests for Continuous and Binary Traits in Large-Scale Whole-Genome Sequencing Studies.30639324 · Chen, Han, Huffman, Jennifer E, Brody, Jennifer A et al.2019 · 117 citationsAmerican journal of human genetics. 2019;104(2):260-274
Association Between Titin Loss-of-Function Variants and Early-Onset Atrial Fibrillation.30535219 · Choi, Seung Hoan, Weng, Lu-Chen, Roselli, Carolina et al.2018 · 234 citationsJAMA. 2018;320(22):2354-2364
Multi-Omics Analysis Reveals a HIF Network and Hub Gene EPAS1 Associated with Lung Adenocarcinoma.29859855 · Wang, Zhaoxi, Wei, Yongyue, Zhang, Ruyang et al.2018 · 45 citationsEBioMedicine. 2018;32:93-101
Genome-wide association study and meta-analysis identify loci associated with ventricular and supraventricular ectopy.29618737 · Napier, Melanie D, Franceschini, Nora, Gondalia, Rahul et al.2019 · 7 citationsScientific reports. 2018;8(1):5675
Genome-Wide Association Study of Heavy Smoking and Daily/Nondaily Smoking in the Hispanic Community Health Study/Study of Latinos (HCHS/SOL).28520984 · Saccone, Nancy L, Emery, Leslie S, Sofer, Tamar et al.2019 · 29 citationsNicotine & tobacco research : official journal of the Society for Research on Nicotine and Tobacco. 2018;20(4):448-457
Genome-wide association study of depressive symptoms in the Hispanic Community Health Study/Study of Latinos.29505938 · Dunn, Erin C, Sofer, Tamar, Wang, Min-Jung et al.2019 · 24 citationsJournal of psychiatric research. 2018;99:167-176
GWAS of the electrocardiographic QT interval in Hispanics/Latinos generalizes previously identified loci and identifies population-specific signals.29213071 · Méndez-Giráldez, Raúl, Gogarten, Stephanie M, Below, Jennifer E et al.2019 · 28 citationsScientific reports. 2017;7(1):17075
Genome-wide association study of PR interval in Hispanics/Latinos identifies novel locus at ID2.29127183 · Seyerle, Amanda A, Lin, Henry J, Gogarten, Stephanie M et al.2019 · 22 citationsHeart (British Cardiac Society). 2018;104(11):904-911
Analysis commons, a team approach to discovery in a big-data environment for genetic epidemiology.29074945 · Brody, Jennifer A, Morrison, Alanna C, Bis, Joshua C et al.2019 · 102 citationsNature genetics. 2017;49(11):1560-1563
Erratum: Genetic loci associated with heart rate variability and their effects on cardiac disease risk.28767105 · Nolte, Ilja M, Munoz, M Loretto, Tragante, Vinicius et al.2019 · 8 citationsNature communications. 2017;8:16140
SeqArray-a storage-efficient high-performance data format for WGS variant calls.28334390 · Zheng, Xiuwen, Gogarten, Stephanie M, Lawrence, Michael et al.2018 · 156 citationsBioinformatics (Oxford, England). 2017;33(15):2251-2257
Pharmacogenomics study of thiazide diuretics and QT interval in multi-ethnic populations: the cohorts for heart and aging research in genomic epidemiology.28719597 · Seyerle, A A, Sitlani, C M, Noordam, R et al.2019 · 11 citationsThe pharmacogenomics journal. 2018;18(2):215-226
Genetic loci associated with heart rate variability and their effects on cardiac disease risk.28613276 · Nolte, Ilja M, Munoz, M Loretto, Tragante, Vinicius et al.2018 · 156 citationsNature communications. 2017;8:15805
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