PZ
Peng Zhang
genomicsDatabases, Nucleic AcidDNA MethylationRNA, Long NoncodingbioinformaticsBiomarkerBiotaCircRNADatabases, GeneticGene Expression Profiling
On Valency
published · living versionsW_9ap8u38d·v1 · currentpublished
Observation of spectral lines in the exceptional GRB 221009A
with Yan-Qiu Zhang, Shao-Lin Xiong, Ji-Rong Mao, Shuang-Nan Zhang +19
1 version
Preprints & journals
87 papers in the corpus · 1992–2025Integrative spatial multi-omics reveals prognostic tumor niches in female genital tumors10.1101/2025.11.24.690313v1 · Xu, T., Lin, S., Wu, Y. et al.2025 · 2 citationsbioRxiv
Mitochondrial Genome Variants and Nuclear Mitochondrial DNA Segments in 7331 Individuals from NyuWa and 1KGP.41206126 · Wang 王园鑫, Yuanxin, Wang 王佳佳, Jiajia, Li 李燕燕, Yanyan et al.2026 · 1 citationGenomics, proteomics & bioinformatics. 2025;23(5)
Systematic benchmarking of high-throughput subcellular spatial transcriptomics platforms across human tumors.41107232 · Ren, Pengfei, Zhang, Rui, Wang, Yunfeng et al.2025 · 78 citationsNature communications. 2025;16(1):9232
Proteogenomic Reassessment Provides Novel Insight into the Life Cycle of Tetrahymenathermophila.41038283 · Gu, Chen, Yang, Mingkun, Zhang, Jing et al.2025 · 0 citationsMolecular & cellular proteomics : MCP. 2025;24(11):101081
RNAcentral in 2026: Genes and literature integration10.1101/2025.09.19.677274v2 · Green, A. F., Ribas, C. E., Jandalala, I. et al.2025 · 16 citationsbioRxiv
scIVNL-seq resolves in vivo single-cell RNA dynamics of immune cells during Salmonella infection.40858611 · Xiong, Zhen, Wu, Runyuan, Wang, Yuanxin et al.2025 · 8 citationsNature communications. 2025;16(1):7937
Pathogen Adaptation of HLA Alleles and Its Correlation with Autoimmune Diseases in the Han Chinese.40300101 · Liu, Shuai, Li, Yanyan, Song, Tingrui et al.2025 · 5 citationsGenomics, proteomics & bioinformatics. 2025;23(2)
Bronchiolar adenoma with EGFR exon 19 deletion mutation: a case report and literature review.40270599 · Zhang, Shaobo, Liu, Xiaohui, Zhang, Xiaoxia et al.2025 · 2 citationsFrontiers in oncology. 2025;15:1565549
Systematic Benchmarking of High-Throughput Subcellular Spatial Transcriptomics Platforms10.1101/2024.12.23.630033v1 · Ren, P., Zhang, R., Wang, Y. et al.2024 · 10 citationsbioRxiv
Unlocking Green Biomanufacturing Potential: Superior Heterologous Gene Expression with a T7 Integration Overexpression System in Bacillus subtilis.39718905 · Yao, Zhi-Yuan, Yu, Min-Jun, Li, Qu-Quan et al.2025 · 6 citationsACS synthetic biology. 2025;14(6):1977-1987
Genome-wide investigation of VNTR motif polymorphisms in 8,222 genomes: Implications for biological regulation and human traits.39609246 · Zhang, Sijia, Song, Qiao, Zhang, Peng et al.2024 · 9 citationsCell genomics. 2024;4(12):100699
The Pathogen Adaptation of HLA Alleles and the Correlation with Autoimmune Diseases based on the HLA Diversity Resource in the Han Chinese10.1101/2024.11.19.24317546v1 · Liu, S., Li, Y., Song, T. et al.2024 · 0 citationsmedRxiv
Observation of spectral lines in the exceptional GRB 221009A2403.12851v2 · Yan-Qiu Zhang, Shao-Lin Xiong, Ji-Rong Mao et al.2024 · 42 citationsObservation of spectral lines in the exceptional GRB 221009A. Sci. China-Phys. Mech. Astron. 67, 289511 (2024)on Valency
Adaptive Selection of Cis-regulatory Elements in the Han Chinese.38377343 · Liu, Shuai, Luo, Huaxia, Zhang, Peng et al.2024 · 11 citationsMolecular biology and evolution. 2024;41(3)
Correction: hsa_circ_0007919 induces LIG1 transcription by binding to FOXA1/TET1 to enhance the DNA damage response and promote gemcitabine resistance in pancreatic ductal adenocarcinoma.38229124 · Xu, Lei, Ma, Xiao, Zhang, Xiuzhong et al.2024 · 2 citationsMolecular cancer. 2024;23(1):16
hsa_circ_0007919 induces LIG1 transcription by binding to FOXA1/TET1 to enhance the DNA damage response and promote gemcitabine resistance in pancreatic ductal adenocarcinoma.38044421 · Xu, Lei, Ma, Xiao, Zhang, Xiuzhong et al.2023 · 57 citationsMolecular cancer. 2023;22(1):195
Circular RNA sequencing identified circARNTL2 as a pathogenic factor in psoriasis by facilitating proliferation and cell cycle progression of keratinocytes.37683904 · Zhang, Suhan, Zhu, Yanshan, Li, Siying et al.2026 · 7 citationsClinical immunology (Orlando, Fla.). 2023;255:109766
Recent positive selection signatures reveal phenotypic evolution in the Han Chinese population.37661541 · Luo, Huaxia, Zhang, Peng, Zhang, Wanyu et al.2023 · 27 citationsScience bulletin. 2023;68(20):2391-2404
Noncoding RNA mutations in cancer.37544928 · Zhou, Honghong, Hao, Xinpei, Zhang, Peng et al.2023 · 24 citationsWiley interdisciplinary reviews. RNA. 2023;14(6):e1812
Multiomics analyses reveal DARS1-AS1/YBX1-controlled posttranscriptional circuits promoting glioblastoma tumorigenesis/radioresistance.37540752 · Zheng, Caishang, Wei, Yanjun, Zhang, Qiang et al.2023 · 57 citationsScience advances. 2023;9(31):eadf3984
Characterization of genome-wide STR variation in 6487 human genomes.37045857 · Shi, Yirong, Niu, Yiwei, Zhang, Peng et al.2023 · 67 citationsNature communications. 2023;14(1):2092
Water quality determines protist taxonomic and functional group composition in a high-altitude wetland of international importance.37028668 · An, Ruizhi, Liu, Yang, Pan, Chengmei et al.2023 · 27 citationsThe Science of the total environment. 2023;880:163308
CRISPR/Cas9 screen uncovers functional translation of cryptic lncRNA-encoded open reading frames in human cancer.36856111 · Zheng, Caishang, Wei, Yanjun, Zhang, Peng et al.2023 · 50 citationsThe Journal of clinical investigation. 2023;133(5)
Genome-Wide Identification of G Protein-Coupled Receptors in Ciliated Eukaryotes.36835283 · Luo, Shuai, Zhang, Peng, Miao, Wei et al.2023 · 8 citationsInternational journal of molecular sciences. 2023;24(4)
NPInter v5.0: ncRNA interaction database in a new era.36373614 · Zheng, Yu, Luo, Huaxia, Teng, Xueyi et al.2023 · 83 citationsNucleic acids research. 2023;51(D1):D232-D239
Differential Expression and Correlation Analysis of Global Transcriptome for Hemorrhagic Transformation After Acute Ischemic Stroke.35757529 · Han, Rongrong, Zhang, Peng, Li, Hongfang et al.2022 · 16 citationsFrontiers in neuroscience. 2022;16:889689
Characterizing mobile element insertions in 5675 genomes.35212372 · Niu, Yiwei, Teng, Xueyi, Zhou, Honghong et al.2022 · 42 citationsNucleic acids research. 2022;50(5):2493-2508
Epigenetic mechanisms of DNA methylation in the transgenerational effect of ethylhexyl salicylate on zebrafish.35150701 · Zhou, Ranran, Lu, Guanghua, Yan, Zhenhua et al.2022 · 22 citationsChemosphere. 2022;295:133926
Thermlanseedlines A-G, seven thermopsine-based alkaloids with antiviral and insecticidal activities from the seeds of Thermopsis lanceolata R. Br.35122885 · Zhang, Peng, An, Qiao, Yi, Ping et al.2022 · 11 citationsFitoterapia. 2022;158:105140
piRBase: integrating piRNA annotation in all aspects.34871445 · Wang, Jiajia, Shi, Yirong, Zhou, Honghong et al.2022 · 107 citationsNucleic acids research. 2022;50(D1):D265-D272
The In-Flight Realtime Trigger and Localization Software of GECAM2112.05101v1 · Xiao-Yun Zhao, Shao-Lin Xiong, Xiang-Yang Wen et al.2021 · 15 citationsarXiv
NyuWa Genome resource: A deep whole-genome sequencing-based variation profile and reference panel for the Chinese population.34788621 · Zhang, Peng, Luo, Huaxia, Li, Yanyan et al.2022 · 118 citationsCell reports. 2021;37(7):110017
SmProt: A Reliable Repository with Comprehensive Annotation of Small Proteins Identified from Ribosome Profiling.34536568 · Li, Yanyan, Zhou, Honghong, Chen, Xiaomin et al.2022 · 92 citationsGenomics, proteomics & bioinformatics. 2021;19(4):602-610
CD74 regulates cellularity and maturation of medullary thymic epithelial cells partially by activating the canonical NF-κB signaling pathway.33817835 · Wang, Hong-Xia, Zhang, Qian, Zhang, Jiayu et al.2021 · 9 citationsFASEB journal : official publication of the Federation of American Societies for Experimental Biology. 2021;35(5):e21535
Circular RNA hsa_circ_0003288 induces EMT and invasion by regulating hsa_circ_0003288/miR-145/PD-L1 axis in hepatocellular carcinoma.33858418 · Xu, Guili, Zhang, Peng, Liang, Hansi et al.2021 · 62 citationsCancer cell international. 2021;21(1):212
Genome-wide analysis of mobile element insertions in human genomes10.1101/2021.01.22.427873v1 · Niu, Y., Teng, X., Shi, Y. et al.2021 · 4 citationsbioRxiv
Down-regulation of circular RNA hsa_circ_0007534 suppresses cell growth by regulating miR-219a-5p/SOX5 axis in osteosarcoma.33552887 · Zhang, Peng, Li, Jun2022 · 11 citationsJournal of bone oncology. 2021;27:100349
OxLDL/β2GPI/anti‑β2GPI Ab complex induces inflammatory activation via the TLR4/NF‑κB pathway in HUVECs.33355374 · Zhang, Guiting, Cai, Qianqian, Zhou, Hong et al.2021 · 24 citationsMolecular medicine reports. 2021;23(2)
Active retrotransposons help maintain pericentromeric heterochromatin required for faithful cell division.33060173 · Hao, Yajing, Wang, Dongpeng, Wu, Shuheng et al.2021 · 10 citationsGenome research. 2020;30(11):1570-1582
Comprehensive identification of alternative back-splicing in human tissue transcriptomes.31974555 · Zhang, Peng, Zhang, Xiao-Ou, Jiang, Tingting et al.2020 · 69 citationsNucleic acids research. 2020;48(4):1779-1789
NPInter v4.0: an integrated database of ncRNA interactions.31670377 · Teng, Xueyi, Chen, Xiaomin, Xue, Hua et al.2020 · 171 citationsNucleic acids research. 2020;48(D1):D160-D165
The biological function and the regulatory roles of wild-type p53-induced phosphatase 1 in immune system.32696682 · Shi, Lu, Tian, Qianchuan, Feng, Chang et al.2021 · 11 citationsInternational reviews of immunology. 2020;39(6):280-291
[OxLDL/β2GPI/anti-β2GPI complex promotes calcification and inflammatory cytokine expression in A7r5 cells].31894004 · Yao, Yuye, Cai, Qianqian, Zhou, Hong et al.2020 · 0 citationsXi bao yu fen zi mian yi xue za zhi = Chinese journal of cellular and molecular immunology. 2019;35(12):1069-1075
Whole-Exome Sequencing Identifies Damaging de novo Variants in Anencephalic Cases.31849593 · Wang, Linlin, Ren, Aiguo, Tian, Tian et al.2024 · 18 citationsFrontiers in neuroscience. 2019;13:1285
Down-Regulation of Circular RNA_000926 Attenuates Renal Cell Carcinoma Progression through miRNA-411-Dependent CDH2 Inhibition.31476285 · Zhang, Dong, Yang, Xiao-Jie, Luo, Qi-Dong et al.2020 · 45 citationsThe American journal of pathology. 2019;189(12):2469-2486
Trading Genome Vulnerability for Stable Genetic Inheritance: Active Retrotransposons Help Maintain Pericentromeric Heterochromatin Required for Faithful Cell Division10.1101/740753v1 · Hao, Y., Wang, D., Wu, S. et al.2019 · 0 citationsbioRxiv
6mA-DNA-binding factor Jumu controls maternal-to-zygotic transition upstream of Zelda.31101825 · He, Shunmin, Zhang, Guoqiang, Wang, Jiajia et al.2019 · 57 citationsNature communications. 2019;10(1):2219
[The oxLDL/β2GPI/anti-β2GPI antibody complex induces apoptosis of human umbilical vein endothelial cells by promoting the production of reactive oxygen species].31030715 · Chen, Yudan, Zhou, Hong, He, Chao et al.2019 · 3 citationsXi bao yu fen zi mian yi xue za zhi = Chinese journal of cellular and molecular immunology. 2019;35(3):223-229
piRBase: a comprehensive database of piRNA sequences.30371818 · Wang, Jiajia, Zhang, Peng, Lu, Yiping et al.2020 · 236 citationsNucleic acids research. 2019;47(D1):D175-D180
Circular RNA hsa_circ_0000263 participates in cervical cancer development by regulating target gene of miR-150-5p.30569515 · Cai, Hongning, Zhang, Peng, Xu, Meng et al.2020 · 104 citationsJournal of cellular physiology. 2019;234(7):11391-11400
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