ZL
Zhenyu Li
AlgorithmsMicroRNAsRNA, Long NoncodingAcute lung injuryAcute Lung InjuryAgingAngiogenesisbioengineeringbioinformaticsCarcinoma, Non-Small-Cell Lung
On Valency
published · living versionsW_26xzgw86·v1 · currentpublished
Assemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species
with Keith R. Bradnam, Joseph N. Fass, Anton Alexandrov, Paul Baranay +86
1 version
Preprints & journals
11 papers in the corpus · 2011–2026GraphESMStable: A Deep Learning Framework for Protein Stability Prediction Fusing Pre-trained Sequence Models and Graph Neural Networks10.64898/2026.01.08.698524v1 · Zhang, H., Li, Z., He, J.2026 · 0 citationsbioRxiv
ANRIL modulates endothelial senescence and angiogenesis through SASP-driven miR146a regulation in age-related vascular dysfunction.40222710 · Lin, Kechuan, Luo, Xin, Du, Can et al.2025 · 7 citationsMechanisms of ageing and development. 2025;225:112058
Effect of imatinib on lipopolysaccharide‑induced acute lung injury and endothelial dysfunction through the P38 MAPK and NF-κB signaling pathways in vivo and in vitro.39725368 · Liu, Yaru, Li, Duanyang, Zhang, Tianyi et al.2025 · 7 citationsRespiratory physiology & neurobiology. 2025;333:104388
IncRNA Linc00511 Upregulation Elevates TGFBR1 and Participates in the Postoperative Distant Recurrence of Non-Small-Cell Lung Cancer by Targeting miR-98-5p.35993940 · Li, Chunlin, Li, Zhenyu, Yi, Hua et al.2022 · 10 citationsCritical reviews in eukaryotic gene expression. 2022;32(5):1-10
XY-Meta: A High-Efficiency Search Engine for Large-Scale Metabolome Annotation with Accurate FDR Estimation.32212716 · Li, Dehua, Liu, Binghang, Zheng, Hancheng et al.2021 · 13 citationsAnalytical chemistry. 2020;92(8):5701-5707
A Reference Feature based method for Quantification and Identification of LC-MS based untargeted metabolomics10.1101/2020.03.26.010769v1 · luan, e., cheng, k., long, q. et al.2020 · 0 citationsbioRxiv
Whole-genome analyses resolve early branches in the tree of life of modern birds.25504713 · Jarvis, Erich D, Mirarab, Siavash, Aberer, Andre J et al.2014 · 1,897 citationsScience (New York, N.Y.). 2014;346(6215):1320-31
Assemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species.23870653 · Bradnam, Keith R, Fass, Joseph N, Alexandrov, Anton et al.2014 · 671 citationsGigaScience. 2013;2(1):10
SOAPdenovo2: an empirically improved memory-efficient short-read de novo assembler.23587118 · Luo, Ruibang, Liu, Binghang, Xie, Yinlong et al.2013 · 5,309 citationsGigaScience. 2012;1(1):18
COPE: an accurate k-mer-based pair-end reads connection tool to facilitate genome assembly.23044551 · Liu, Binghang, Yuan, Jianying, Yiu, Siu-Ming et al.2013 · 138 citationsBioinformatics (Oxford, England). 2012;28(22):2870-4
Assemblathon 1: a competitive assessment of de novo short read assembly methods.21926179 · Earl, Dent, Bradnam, Keith, St John, John et al.2012 · 507 citationsGenome research. 2011;21(12):2224-41
Career total: 16 works. 11 are in this corpus.
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