WL
Wenqi Li
cs.CVcs.LGcs.AIeess.IVcs.DCcs.NEArtificial IntelligenceConvolutional neural networkcs.CRDeep learning
On Valency
published · living versionsW_ctyr365s·v1 · currentpublished
Identifying the Best Machine Learning Algorithms for Brain Tumor Segmentation, Progression Assessment, and Overall Survival Prediction in the BRATS Challenge
with Spyridon Bakas, Mauricio Reyes, Andras Jakab, Stefan Bauer +422
1 version
Preprints & journals
54 papers in the corpus · 2013–2024VILA-M3: Enhancing Vision-Language Models with Medical Expert Knowledge2411.12915v3 · Vishwesh Nath, Wenqi Li, Dong Yang et al.2024 · 32 citationsarXiv
A Short Review and Evaluation of SAM2's Performance in 3D CT Image Segmentation2408.11210v1 · Yufan He, Pengfei Guo, Yucheng Tang et al.2024 · 0 citationsarXiv
VISTA3D: A Unified Segmentation Foundation Model For 3D Medical Imaging2406.05285v3 · Yufan He, Pengfei Guo, Yucheng Tang et al.2024 · 77 citationsarXiv
MONAI Label: A framework for AI-assisted interactive labeling of 3D medical images.38776843 · Diaz-Pinto, Andres, Alle, Sachidanand, Nath, Vishwesh et al.2024 · 159 citationsMedical image analysis. 2024;95:103207
Disruptive Autoencoders: Leveraging Low-level features for 3D Medical Image Pre-training2307.16896v1 · Jeya Maria Jose Valanarasu, Yucheng Tang, Dong Yang et al.2023 · 5 citationsarXiv
Do Gradient Inversion Attacks Make Federated Learning Unsafe?37021996 · Hatamizadeh, Ali, Yin, Hongxu, Molchanov, Pavlo et al.2023 · 126 citationsIEEE transactions on medical imaging. 2023;42(7):2044-2056
Fair Federated Medical Image Segmentation via Client Contribution Estimation2303.16520v1 · Meirui Jiang, Holger R Roth, Wenqi Li et al.2023 · 78 citationsarXiv
Communication-Efficient Vertical Federated Learning with Limited Overlapping Samples2303.16270v2 · Jingwei Sun, Ziyue Xu, Dong Yang et al.2023 · 24 citationsarXiv
MONAI: An open-source framework for deep learning in healthcare2211.02701v1 · M. Jorge Cardoso, Wenqi Li, Richard Brown et al.2022 · 484 citationsarXiv
NVIDIA FLARE: Federated Learning from Simulation to Real-World2210.13291v3 · Holger R. Roth, Yan Cheng, Yuhong Wen et al.2022 · 71 citationsIEEE Data Eng. Bull., Vol. 46, No. 1, 2023
Split-U-Net: Preventing Data Leakage in Split Learning for Collaborative Multi-Modal Brain Tumor Segmentation2208.10553v2 · Holger R. Roth, Ali Hatamizadeh, Ziyue Xu et al.2022 · 16 citationsarXiv
UNetFormer: A Unified Vision Transformer Model and Pre-Training Framework for 3D Medical Image Segmentation2204.00631v2 · Ali Hatamizadeh, Ziyue Xu, Dong Yang et al.2022 · 30 citationsarXiv
GradViT: Gradient Inversion of Vision Transformers2203.11894v3 · Ali Hatamizadeh, Hongxu Yin, Holger Roth et al.2022 · 72 citationsarXiv
Closing the Generalization Gap of Cross-silo Federated Medical Image Segmentation2203.10144v2 · An Xu, Wenqi Li, Pengfei Guo et al.2022 · 77 citationsarXiv
Auto-FedRL: Federated Hyperparameter Optimization for Multi-institutional Medical Image Segmentation2203.06338v2 · Pengfei Guo, Dong Yang, Ali Hatamizadeh et al.2022 · 56 citationsarXiv
Self-Supervised Pre-Training of Swin Transformers for 3D Medical Image Analysis2111.14791v2 · Yucheng Tang, Dong Yang, Wenqi Li et al.2021 · 845 citationsarXiv
Federated Whole Prostate Segmentation in MRI with Personalized Neural Architectures2107.08111v1 · Holger R. Roth, Dong Yang, Wenqi Li et al.2021 · 31 citationsarXiv
Rapid Artificial Intelligence Solutions in a Pandemic - The COVID-19-20 Lung CT Lesion Segmentation Challenge.34100010 · Roth, Holger R, Xu, Ziyue, Diez, Carlos Tor et al.2023 · 99 citationsResearch square. 2021
Auto-FedAvg: Learnable Federated Averaging for Multi-Institutional Medical Image Segmentation2104.10195v1 · Yingda Xia, Dong Yang, Wenqi Li et al.2021 · 39 citationsarXiv
Federated semi-supervised learning for COVID region segmentation in chest CT using multi-national data from China, Italy, Japan.33601166 · Yang, Dong, Xu, Ziyue, Li, Wenqi et al.2021 · 279 citationsMedical image analysis. 2021;70:101992
Deep Class-Specific Affinity-Guided Convolutional Network for Multimodal Unpaired Image Segmentation2101.01513v1 · Jingkun Chen, Wenqi Li, Hongwei Li et al.2021 · 18 citationsarXiv
Learning joint segmentation of tissues and brain lesions from task-specific hetero-modal domain-shifted datasets.33129151 · Dorent, Reuben, Booth, Thomas, Li, Wenqi et al.2021 · 36 citationsMedical image analysis. 2021;67:101862
The future of digital health with federated learning.33015372 · Rieke, Nicola, Hancox, Jonny, Li, Wenqi et al.2026 · 3,417 citationsNPJ digital medicine. 2020;3:119
Real-Time Segmentation of Non-Rigid Surgical Tools based on Deep Learning and Tracking2009.03016v1 · Luis C. Garc'ia-Peraza-Herrera, Wenqi Li, Caspar Gruijthuijsen et al.2020 · 107 citationsarXiv
Federated Learning for Breast Density Classification: A Real-World Implementation2009.01871v3 · Holger R. Roth, Ken Chang, Praveer Singh et al.2020 · 201 citationsIn: Albarqouni S. et al. (eds) Domain Adaptation and Representation Transfer, and Distributed and Collaborative Learning. DART 2020, DCL 2020. Lecture Notes in Computer Science, vol 12444. Springer, Cham
LAMP: Large Deep Nets with Automated Model Parallelism for Image Segmentation2006.12575v3 · Wentao Zhu, Can Zhao, Wenqi Li et al.2020 · 18 citationsarXiv
An artificial intelligence framework for automatic segmentation and volumetry of vestibular schwannomas from contrast-enhanced T1-weighted and high-resolution T2-weighted MRI.31812137 · Shapey, Jonathan, Wang, Guotai, Dorent, Reuben et al.2025 · 118 citationsJournal of neurosurgery. 2021;134(1):171-179
An automated framework for localization, segmentation and super-resolution reconstruction of fetal brain MRI.31704293 · Ebner, Michael, Wang, Guotai, Li, Wenqi et al.2020 · 292 citationsNeuroImage. 2020;206:116324
NeurReg: Neural Registration and Its Application to Image Segmentation1910.01763v1 · Wentao Zhu, Andriy Myronenko, Ziyue Xu et al.2019 · 31 citationsarXiv
Automatic Brain Tumor Segmentation Based on Cascaded Convolutional Neural Networks With Uncertainty Estimation.31456678 · Wang, Guotai, Li, Wenqi, Ourselin, Sébastien et al.2024 · 249 citationsFrontiers in computational neuroscience. 2019;13:56
Learning joint lesion and tissue segmentation from task-specific hetero-modal datasets1907.03327v1 · Reuben Dorent, Wenqi Li, Jinendra Ekanayake et al.2019 · 2 citationsarXiv
Automatic Segmentation of Vestibular Schwannoma from T2-Weighted MRI by Deep Spatial Attention with Hardness-Weighted Loss1906.03906v1 · Guotai Wang, Jonathan Shapey, Wenqi Li et al.2019 · 71 citationsarXiv
2017 Robotic Instrument Segmentation Challenge1902.06426v2 · Max Allan, Alex Shvets, Thomas Kurmann et al.2019 · 160 citationsarXiv
Aleatoric uncertainty estimation with test-time augmentation for medical image segmentation with convolutional neural networks.31595105 · Wang, Guotai, Li, Wenqi, Aertsen, Michael et al.2025 · 653 citationsNeurocomputing. 2019;335:34-45
Artificial intelligence for the real-time classification of intrapapillary capillary loop patterns in the endoscopic diagnosis of early oesophageal squamous cell carcinoma: A proof-of-concept study.31080614 · Everson, M, Herrera, Lcgp, Li, W et al.2020 · 86 citationsUnited European gastroenterology journal. 2019;7(2):297-306
Privacy-preserving Federated Brain Tumour Segmentation.39453415 · Li, Wenqi, Milletarì, Fausto, Xu, Daguang et al.2024 · 577 citationsMachine learning in medical imaging. MLMI (Workshop). 2019;11861:133-141
Identifying the Best Machine Learning Algorithms for Brain Tumor Segmentation, Progression Assessment, and Overall Survival Prediction in the BRATS Challenge1811.02629v3 · Spyridon Bakas, Mauricio Reyes, Andras Jakab et al.2018 · 1,441 citationsarXivon Valency
Automatic Brain Tumor Segmentation using Convolutional Neural Networks with Test-Time Augmentation1810.07884v2 · Guotai Wang, Wenqi Li, Sebastien Ourselin et al.2018 · 173 citationsarXiv
Deep Boosted Regression for MR to CT Synthesis1808.07431v1 · Kerstin Klaser, Pawel Markiewicz, Marta Ranzini et al.2018 · 19 citationsarXiv
Weakly-supervised convolutional neural networks for multimodal image registration.30007253 · Hu, Yipeng, Modat, Marc, Gibson, Eli et al.2019 · 459 citationsMedical image analysis. 2018;49:1-13
Interactive Medical Image Segmentation Using Deep Learning With Image-Specific Fine Tuning.29969407 · Wang, Guotai, Li, Wenqi, Zuluaga, Maria A et al.2019 · 841 citationsIEEE transactions on medical imaging. 2018;37(7):1562-1573
Uncertainty in multitask learning: joint representations for probabilistic MR-only radiotherapy planning1806.06595v1 · Felix J.S. Bragman, Ryutaro Tanno, Zach Eaton-Rosen et al.2018 · 49 citationsarXiv
DeepIGeoS: A Deep Interactive Geodesic Framework for Medical Image Segmentation.29993532 · Wang, Guotai, Zuluaga, Maria A, Li, Wenqi et al.2020 · 500 citationsIEEE transactions on pattern analysis and machine intelligence. 2019;41(7):1559-1572
Interpretable Fully Convolutional Classification of Intrapapillary Capillary Loops for Real-Time Detection of Early Squamous Neoplasia1805.00632v1 · Luis C. Garcia-Peraza-Herrera, Martin Everson, Wenqi Li et al.2018 · 7 citationsarXiv
NiftyNet: a deep-learning platform for medical imaging.29544777 · Gibson, Eli, Li, Wenqi, Sudre, Carole et al.2018 · 553 citationsComputer methods and programs in biomedicine. 2018;158:113-122
Structure Prediction for Gland Segmentation With Hand-Crafted and Deep Convolutional Features.28910760 · Manivannan, Siyamalan, Li, Wenqi, Zhang, Jianguo et al.2018 · 54 citationsIEEE transactions on medical imaging. 2018;37(1):210-221
Automatic Brain Tumor Segmentation using Cascaded Anisotropic Convolutional Neural Networks1709.00382v2 · Guotai Wang, Wenqi Li, Sebastien Ourselin et al.2017 · 578 citationsarXiv
On the Compactness, Efficiency, and Representation of 3D Convolutional Networks: Brain Parcellation as a Pretext Task1707.01992v1 · Wenqi Li, Guotai Wang, Lucas Fidon et al.2017 · 336 citationsarXiv
Generalised Wasserstein Dice Score for Imbalanced Multi-class Segmentation using Holistic Convolutional Networks1707.00478v4 · Lucas Fidon, Wenqi Li, Luis C. Garcia-Peraza-Herrera et al.2017 · 159 citationsarXiv
Scalable multimodal convolutional networks for brain tumour segmentation1706.08124v1 · Lucas Fidon, Wenqi Li, Luis C. Garcia-Peraza-Herrera et al.2017 · 58 citationsarXiv
Career total: 86 works. 54 are in this corpus.Showing the 50 most recent.
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