RS
Rachel Sparks
cs.CVeess.IVElectrodes, Implantedcomputer-assisted planningEpilepsycs.AIComputer-assisted planningcs.LGepilepsy surgeryEpiNav
On Valency
published · living versionsW_h2k9t5wr·v1 · currentpublished
Spatial Feature-wise Linear Modulation (SpFiLM) for Contrast Agent-Aware Brain Parcellation
with Pushpendra Singh, Joshua R. Astley, Roman Rodionov, John Duncan +1
1 version
Preprints & journals
72 papers in the corpus · 2010–2026Spatial Feature-wise Linear Modulation (SpFiLM) for Contrast Agent-Aware Brain Parcellation2609.07718v1 · Pushpendra Singh, Joshua R. Astley, Roman Rodionov et al.2026 · 0 citationsarXivon Valency
Decoding Phenotypes: A Framework for Fusing Genomic Language Models and Neuroimaging2608.08926v1 · Tianli Tao, Ziyang Wang, Emma Robinson et al.2026 · 0 citationsarXiv
Resting-state EEG network markers differentiate people with epilepsy and functional seizures10.64898/2026.04.14.26350505v2 · Kissack, P., Woldman, W., Sparks, R. et al.2026 · 0 citationsmedRxiv
RetiGen: Framework leveraging domain generalization and test-time adaptation for multi-view retinal diagnostics.40934550 · Zhang, Gongyu, Chen, Ze, Huo, Jiayu et al.2025 · 1 citationComputers in biology and medicine. 2025;197(Pt B):111030
DeepISLES: a clinically validated ischemic stroke segmentation model from the ISLES'22 challenge.40783484 · de la Rosa, Ezequiel, Reyes, Mauricio, Liew, Sook-Lei et al.2025 · 23 citationsNature communications. 2025;16(1):7357
Self-supervised brain lesion generation for effective data augmentation of medical images.40472583 · Huo, Jiayu, Ourselin, Sébastien, Sparks, Rachel2025 · 2 citationsNeural networks : the official journal of the International Neural Network Society. 2025;190:107629
Computer-assisted stereoelectroencephalography planning: center-specific priors enhance planning.40083454 · Dasgupta, Debayan, Elliott, Cameron A, O'Keeffe, Aidan G et al.2025 · 2 citationsFrontiers in neurology. 2025;16:1514442
Refining computer-assisted SEEG planning with spatial priors - A novel comparison of implantation strategies across adult and paediatric centres.39808968 · Dasgupta, Debayan, Chari, Aswin, Khan, Mehdi et al.2025 · 3 citationsNeurophysiologie clinique = Clinical neurophysiology. 2025;55(1):103038
SAM-I2I: Unleash the Power of Segment Anything Model for Medical Image Translation2411.12755v1 · Jiayu Huo, Sebastien Ourselin, Rachel Sparks2024 · 3 citationsarXiv
Generative Medical Segmentation2403.18198v2 · Jiayu Huo, Xi Ouyang, S'ebastien Ourselin et al.2024 · 5 citationsarXiv
MatchSeg: Towards Better Segmentation via Reference Image Matching2403.15901v3 · Jiayu Huo, Ruiqiang Xiao, Haotian Zheng et al.2024 · 4 citationsarXiv
RetiGen: A Framework for Generalized Retinal Diagnosis Using Multi-View Fundus Images2403.15647v1 · Ze Chen, Gongyu Zhang, Jiayu Huo et al.2024 · 0 citationsarXiv
DDSB: An Unsupervised and Training-free Method for Phase Detection in Echocardiography2403.12787v1 · Zhenyu Bu, Yang Liu, Jiayu Huo et al.2024 · 6 citationsarXiv
Motion-Boundary-Driven Unsupervised Surgical Instrument Segmentation in Low-Quality Optical Flow2403.10039v2 · Yang Liu, Peiran Wu, Jiayu Huo et al.2024 · 3 citationsarXiv
SAR-RARP50: Segmentation of surgical instrumentation and Action Recognition on Robot-Assisted Radical Prostatectomy Challenge2401.00496v2 · Dimitrios Psychogyios, Emanuele Colleoni, Beatrice Van Amsterdam et al.2023 · 10 citationsarXiv
Limited clinical validity of univariate resting-state EEG markers for classifying seizure disorders.38107505 · Faiman, Irene, Sparks, Rachel, Winston, Joel S et al.2023 · 9 citationsBrain communications. 2023;5(6):fcad330
Assessing informative tract segmentation and nTMS for pre-operative planning.37524245 · Lucena, Oeslle, Lavrador, Jose Pedro, Irzan, Hassna et al.2023 · 5 citationsJournal of neuroscience methods. 2023;396:109933
ARHNet: Adaptive Region Harmonization for Lesion-aware Augmentation to Improve Segmentation Performance2307.01220v1 · Jiayu Huo, Yang Liu, Xi Ouyang et al.2023 · 3 citationsarXiv
Diffusion MRI of the facial-vestibulocochlear nerve complex: a prospective clinical validation study.37328641 · Shapey, Jonathan, Vos, Sjoerd B, Mancini, Laura et al.2023 · 4 citationsEuropean radiology. 2023;33(11):8067-8076
MAPPING: Model Average with Post-processing for Stroke Lesion Segmentation2211.15486v1 · Jiayu Huo, Liyun Chen, Yang Liu et al.2022 · 7 citationsarXiv
Software tool for visualization of a probabilistic map of the epileptogenic zone from seizure semiologies.36313124 · Pérez-García, Fernando, Alim-Marvasti, Ali, Romagnoli, Gloria et al.2022 · 2 citationsFrontiers in neuroinformatics. 2022;16:990859
Brain Lesion Synthesis via Progressive Adversarial Variational Auto-Encoder.39026926 · Huo, Jiayu, Vakharia, Vejay, Wu, Chengyuan et al.2025 · 13 citationsSimulation and synthesis in medical imaging : ... International Workshop, SASHIMI ..., held in conjunction with MICCAI ..., proceedings. SASHIMI (Workshop). 2022;13570:101-111
Probabilistic landscape of seizure semiology localizing values.35663381 · Alim-Marvasti, Ali, Romagnoli, Gloria, Dahele, Karan et al.2025 · 27 citationsBrain communications. 2022;4(3):fcac130
Informative and Reliable Tract Segmentation for Preoperative Planning.37492653 · Lucena, Oeslle, Borges, Pedro, Cardoso, Jorge et al.2025 · 7 citationsFrontiers in radiology. 2022;2:866974
Comparison of robotic and manual implantation of intracerebral electrodes: a single-centre, single-blinded, randomised controlled trial.34429470 · Vakharia, Vejay N, Rodionov, Roman, Miserocchi, Anna et al.2021 · 38 citationsScientific reports. 2021;11(1):17127
Resection of the piriform cortex for temporal lobe epilepsy: a Novel approach on imaging segmentation and surgical application.34406102 · Leon-Rojas, Jose E, Iqbal, Sabahat, Vos, Sjoerd B et al.2024 · 10 citationsBritish journal of neurosurgery. 2024;38(3):716-721
Intraoperative overlay of optic radiation tractography during anteromesial temporal resection: a prospective validation study.34330090 · Vakharia, Vejay N, Vos, Sjoerd B, Winston, Gavin P et al.2022 · 12 citationsJournal of neurosurgery. 2022;136(2):543-552
Enhancing the estimation of fiber orientation distributions using convolutional neural networks.34280774 · Lucena, Oeslle, Vos, Sjoerd B, Vakharia, Vejay et al.2021 · 20 citationsComputers in biology and medicine. 2021;135:104643
Transfer Learning of Deep Spatiotemporal Networks to Model Arbitrarily Long Videos of Seizures2106.12014v2 · Fernando P'erez-Garc'ia, Catherine Scott, Rachel Sparks et al.2021 · 22 citationsMedical Image Computing and Computer Assisted Intervention - MICCAI 2021. Lecture Notes in Computer Science. Springer, Cham
Occipitocervical instrumented fixation utilising patient-specific C2 3D-printed spinal screw trajectory guides in complex paediatric skeletal dysplasia.34148128 · Vakharia, Vejay N, Smith, Luke, Tahir, Zubair et al.2021 · 6 citationsChild's nervous system : ChNS : official journal of the International Society for Pediatric Neurosurgery. 2021;37(8):2643-2650
TorchIO: A Python library for efficient loading, preprocessing, augmentation and patch-based sampling of medical images in deep learning.34311413 · Pérez-García, Fernando, Sparks, Rachel, Ourselin, Sébastien2021 · 605 citationsComputer methods and programs in biomedicine. 2021;208:106236
A self-supervised learning strategy for postoperative brain cavity segmentation simulating resections.34120269 · Pérez-García, Fernando, Dorent, Reuben, Rizzi, Michele et al.2021 · 33 citationsInternational journal of computer assisted radiology and surgery. 2021;16(10):1653-1661
Patient-specific prediction of SEEG electrode bending for stereotactic neurosurgical planning.33761063 · Granados, Alejandro, Han, Yuxuan, Lucena, Oeslle et al.2021 · 11 citationsInternational journal of computer assisted radiology and surgery. 2021;16(5):789-798
Machine Learning for Localizing Epileptogenic-Zone in the Temporal Lobe: Quantifying the Value of Multimodal Clinical-Semiology and Imaging Concordance.34713078 · Alim-Marvasti, Ali, Pérez-García, Fernando, Dahele, Karan et al.2024 · 15 citationsFrontiers in digital health. 2021;3:559103
Brain-Machine Interfaces: The Role of the Neurosurgeon.33197630 · Chari, Aswin, Budhdeo, Sanjay, Sparks, Rachel et al.2021 · 28 citationsWorld neurosurgery. 2021;146:140-147
A generative model of hyperelastic strain energy density functions for multiple tissue brain deformation.33165705 · Granados, Alejandro, Perez-Garcia, Fernando, Schweiger, Martin et al.2021 · 3 citationsInternational journal of computer assisted radiology and surgery. 2021;16(1):141-150
Enhancing Fiber Orientation Distributions using convolutional Neural Networks2008.05409v2 · Oeslle Lucena, Sjoerd B. Vos, Vejay Vakharia et al.2020 · 0 citationsarXiv
Refining Planning for Stereoelectroencephalography: A Prospective Validation of Spatial Priors for Computer-Assisted Planning With Application of Dynamic Learning.32765411 · Vakharia, Vejay N, Sparks, Rachel E, Granados, Alejandro et al.2021 · 9 citationsFrontiers in neurology. 2020;11:706
Simulation of Brain Resection for Cavity Segmentation Using Self-Supervised and Semi-Supervised Learning2006.15693v1 · Fernando P'erez-Garc'ia, Roman Rodionov, Ali Alim-Marvasti et al.2020 · 18 citationsMedical Image Computing and Computer Assisted Intervention - MICCAI 2020. Lecture Notes in Computer Science, vol 12263. Springer, Cham
Automated computation and analysis of accuracy metrics in stereoencephalography.32339522 · Granados, Alejandro, Rodionov, Roman, Vakharia, Vejay et al.2021 · 10 citationsJournal of neuroscience methods. 2020;340:108710
Computer-Assisted Versus Manual Planning for Stereotactic Brain Biopsy: A Retrospective Comparative Pilot Study.31381800 · Marcus, Hani J, Vakharia, Vejay N, Sparks, Rachel et al.2021 · 19 citationsOperative neurosurgery (Hagerstown, Md.). 2020;18(4):417-422
Computer-assisted planning for minimally invasive anterior two-thirds laser corpus callosotomy: A feasibility study with probabilistic tractography validation.31982679 · Vakharia, Vejay N, Sparks, Rachel E, Vos, Sjoerd B et al.2021 · 11 citationsNeuroImage. Clinical. 2020;25:102174
Computer-Assisted Planning for Stereoelectroencephalography (SEEG).31432448 · Vakharia, Vejay N, Sparks, Rachel, Miserocchi, Anna et al.2020 · 23 citationsNeurotherapeutics : the journal of the American Society for Experimental NeuroTherapeutics. 2019;16(4):1183-1197
Multicenter validation of automated trajectories for selective laser amygdalohippocampectomy.31392717 · Vakharia, Vejay N, Sparks, Rachel E, Li, Kuo et al.2020 · 21 citationsEpilepsia. 2019;60(9):1949-1959
The Effect of Vascular Segmentation Methods on Stereotactic Trajectory Planning for Drug-Resistant Focal Epilepsy: A Retrospective Cohort Study.31650126 · Vakharia, Vejay N, Sparks, Rachel, Vos, Sjoerd B et al.2026 · 12 citationsWorld neurosurgery: X. 2019;4:100057
Stereoelectroencephalography electrode placement: Detection of blood vessel conflicts.31329275 · Li, Kuo, Vakharia, Vejay N, Sparks, Rachel et al.2020 · 25 citationsEpilepsia. 2019;60(9):1942-1948
Association of Piriform Cortex Resection With Surgical Outcomes in Patients With Temporal Lobe Epilepsy.30855662 · Galovic, Marian, Baudracco, Irene, Wright-Goff, Evan et al.2020 · 131 citationsJAMA neurology. 2019;76(6):690-700
Optimizing Trajectories for Cranial Laser Interstitial Thermal Therapy Using Computer-Assisted Planning: A Machine Learning Approach.30520003 · Li, Kuo, Vakharia, Vejay N, Sparks, Rachel et al.2019 · 37 citationsNeurotherapeutics : the journal of the American Society for Experimental NeuroTherapeutics. 2019;16(1):182-191
Automated fiber tract reconstruction for surgery planning: Extensive validation in language-related white matter tracts.31163386 · Mancini, Matteo, Vos, Sjoerd B, Vakharia, Vejay N et al.2020 · 26 citationsNeuroImage. Clinical. 2019;23:101883
Automatic segmentation of stereoelectroencephalography (SEEG) electrodes post-implantation considering bending.29736800 · Granados, Alejandro, Vakharia, Vejay, Rodionov, Roman et al.2018 · 31 citationsInternational journal of computer assisted radiology and surgery. 2018;13(6):935-946
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