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cs.LGstat.MLstat.MEmath.STstat.THstat.COGene Regulatory Networkscs.AIGene Expression Regulationstat.AP

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published · living versions
W_augead6s·v1 · currentpublished
Youtu-Parsing-Omni: One Encoder, One Schema, All Modalities
with Yunhang Shen, Zhangquan Chen, Xiaotian Li, Zhongpeng Cai +25
1 version

Preprints & journals

42 papers in the corpus · 2005–2025
The Correlation Thresholding Algorithm for Exploratory Factor Analysis2505.21100v1 · Dale S. Kim, Audrey Lu, Qing Zhou2025 · 0 citationsStructural Equation Modeling: A Multidisciplinary Journal 32(6) (2025) 966-979
Federated Learning of Generalized Linear Causal Networks.38530737 · Ye, Qiaoling, Amini, Arash A, Zhou, Qing2024 · 22 citationsIEEE transactions on pattern analysis and machine intelligence. 2024;46(10):6623-6636
Text-only Synthesis for Image Captioning2405.18258v1 · Qing Zhou, Junlin Huang, Qiang Li et al.2024 · 0 citationsarXiv
Morphologies, mechanical and in vitro behaviors of DLP-based 3D printed HA scaffolds with different structural configurations.37441027 · Liu, Ke, Zhou, Qing, Zhang, Xueqin et al.2023 · 32 citationsRSC advances. 2023;13(30):20830-20838
Generative Steganography Diffusion2305.03472v2 · Ping Wei, Qing Zhou, Zichi Wang et al.2023 · 9 citationsarXiv
Additive Manufacturing of Bioceramic Implants for Restoration Bone Engineering: Technologies, Advances, and Future Perspectives.36786214 · Zhou, Qing, Su, Xiaonan, Wu, Jianqin et al.2023 · 70 citationsACS biomaterials science & engineering. 2023;9(3):1164-1189
An empirical Bayes approach to stochastic blockmodels and graphons: shrinkage estimation and model selection.35875655 · Peng, Zhanhao, Zhou, Qing2022 · 1 citationPeerJ. Computer science. 2022;8:e1006
Optimizing Regularized Cholesky Score for Order-Based Learning of Bayesian Networks.32340938 · Ye, Qiaoling, Amini, Arash A, Zhou, Qing2021 · 31 citationsIEEE transactions on pattern analysis and machine intelligence. 2021;43(10):3555-3572
Partitioned hybrid learning of Bayesian network structures2103.12188v1 · Jireh Huang, Qing Zhou2021 · 13 citationsarXiv
Causal network learning with non-invertible functional relationships2004.09646v1 · Bingling Wang, Qing Zhou2020 · 5 citationsComputational Statistics and Data Analysis, 156: 107141 (2021)
On perfectness in Gaussian graphical models1909.01978v1 · Arash A. Amini, Bryon Aragam, Qing Zhou2019 · 6 citationsarXiv
Learning Gaussian DAGs from Network Data1905.10848v2 · Hangjian Li, Oscar Hernan Madrid Padilla, Qing Zhou2019 · 0 citationsarXiv
Learning big Gaussian Bayesian networks: partition, estimation, and fusion1904.10900v1 · Jiaying Gu, Qing Zhou2019 · 15 citationsJournal of Machine Learning Research, 21(158): 1-31, 2020
The neighborhood lattice for encoding partial correlations in a Hilbert space1711.00991v2 · Arash A. Amini, Bryon Aragam, Qing Zhou2017 · 1 citationarXiv
Learning Large-Scale Bayesian Networks with the sparsebn Package1703.04025v2 · Bryon Aragam, Jiaying Gu, Qing Zhou2017 · 42 citationsJournal of Statistical Software, 91(11), 1-38, 2019
Learning Directed Acyclic Graphs with Penalized Neighbourhood Regression1511.08963v3 · Bryon Aragam, Arash A. Amini, Qing Zhou2015 · 30 citationsarXiv
Uncertainty Quantification Under Group Sparsity1507.01296v4 · Qing Zhou, Seunghyun Min2015 · 5 citationsBiometrika, 104: 613-632, 2017
ordinalgmifs: An R Package for Ordinal Regression in High-dimensional Data Settings.25574124 · Archer, Kellie J, Hou, Jiayi, Zhou, Qing et al.2015 · 53 citationsCancer informatics. 2014;13:187-95
Detecting clustering and ordering binding patterns among transcription factors via point process models.24790155 · Cha, Maria, Zhou, Qing2015 · 10 citationsBioinformatics (Oxford, England). 2014;30(16):2263-71
Monte Carlo Simulation for Lasso-Type Problems by Estimator Augmentation1401.4425v2 · Qing Zhou2014 · 14 citationsJournal of the American Statistical Association, 109: 1495-1516 (2014)
Concave Penalized Estimation of Sparse Gaussian Bayesian Networks1401.0852v2 · Bryon Aragam, Qing Zhou2014 · 73 citationsJournal of Machine Learning Research 16(Nov):2273-2328, 2015
A penalized Bayesian approach to predicting sparse protein-DNA binding landscapes.24115169 · Levinson, Matthew, Zhou, Qing2014 · 5 citationsBioinformatics (Oxford, England). 2014;30(5):636-43
Co-regulation in embryonic stem cells via context-dependent binding of transcription factors.23793746 · Lee, Yuju, Zhou, Qing2014 · 18 citationsBioinformatics (Oxford, England). 2013;29(17):2162-8
Finding multiple minimum-energy conformations of the hydrophobic-polar protein model via multidomain sampling.23030946 · Tang, Wei, Zhou, Qing2013 · 14 citationsPhysical review. E, Statistical, nonlinear, and soft matter physics. 2012;86(3 Pt 1):031909
Multi-Domain Sampling With Applications to Structural Inference of Bayesian Networks1110.3392v1 · Qing Zhou2011 · 33 citationsJournal of the American Statistical Association, 106: 1317-1330 (2011)
Random walk over basins of attraction to construct ising energy landscapes.21635078 · Zhou, Qing2011 · 26 citationsPhysical review letters. 2011;106(18):180602
On weight matrix and free energy models for sequence motif detection.21128853 · Zhou, Qing2011 · 5 citationsJournal of computational biology : a journal of computational molecular cell biology. 2010;17(12):1621-38
Identification of context-dependent motifs by contrasting ChIP binding data.20870645 · Mason, Mike J, Plath, Kathrin, Zhou, Qing2011 · 40 citationsBioinformatics (Oxford, England). 2010;26(22):2826-32
Heterogeneity in DNA multiple alignments: modeling, inference, and applications in motif finding.19995355 · Chen, Gong, Zhou, Qing2011 · 3 citationsBiometrics. 2010;66(3):694-704
Signed weighted gene co-expression network analysis of transcriptional regulation in murine embryonic stem cells.19619308 · Mason, Mike J, Fan, Guoping, Plath, Kathrin et al.2009 · 242 citationsBMC genomics. 2009;10:327
Systemic disease-induced salivary biomarker profiles in mouse models of melanoma and non-small cell lung cancer.19517020 · Gao, Kai, Zhou, Hui, Zhang, Lei et al.2009 · 84 citationsPloS one. 2009;4(6):e5875
Energy landscape of a spin-glass model: exploration and characterization.19518426 · Zhou, Qing, Wong, Wing Hung2009 · 24 citationsPhysical review. E, Statistical, nonlinear, and soft matter physics. 2009;79(5 Pt 1):051117
Reconstructing the energy landscape of a distribution from Monte Carlo samples0901.3999v1 · Qing Zhou, Wing Hung Wong2009 · 0 citationsAnnals of Applied Statistics 2008, Vol. 2, No. 4, 1307-1331
Role of the murine reprogramming factors in the induction of pluripotency.19167336 · Sridharan, Rupa, Tchieu, Jason, Mason, Mike J et al.2009 · 643 citationsCell. 2009;136(2):364-77
Extracting sequence features to predict protein-DNA interactions: a comparative study.18556756 · Zhou, Qing, Liu, Jun S2008 · 2 citationsNucleic acids research. 2008;36(12):4137-48
A gene regulatory network in mouse embryonic stem cells.17940043 · Zhou, Qing, Chipperfield, Hiram, Melton, Douglas A et al.2007 · 283 citationsProceedings of the National Academy of Sciences of the United States of America. 2007;104(42):16438-43
Rejoinder to "Equi-energy sampler with applications in statistical inference and statistical mechanics"math/0611224v1 · S. C. Kou, Qing Zhou, Wing H. Wong2006 · 0 citationsAnnals of Statistics 2006, Vol. 34, No. 4, 1646-1652
A boosting approach for motif modeling using ChIP-chip data.15817698 · Hong, Pengyu, Liu, X Shirley, Zhou, Qing et al.2005 · 61 citationsBioinformatics (Oxford, England). 2005;21(11):2636-43
Career total: 104 works. 42 are in this corpus.

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