JY
Jianying Yuan
AlgorithmsChromosome AberrationsModels, TheoreticalAntimicrobialsbalanced translocationbalanced translocationsBiodiversityBiomarkersblood cultureBlood culture
On Valency
published · living versionsW_26xzgw86·v1 · currentpublished
Assemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species
with Keith R. Bradnam, Joseph N. Fass, Anton Alexandrov, Paul Baranay +86
1 version
Preprints & journals
22 papers in the corpus · 2011–2025Enhanced SOLOv2: An Effective Instance Segmentation Algorithm for Densely Overlapping Silkworms.41012940 · Yuan, Jianying, Li, Hao, Cheng, Chen et al.2025 · 1 citationSensors (Basel, Switzerland). 2025;25(18)
Exploring the value of hybrid capture-based next-generation sequencing technology in the suspected diagnosis of bloodstream infections.39529632 · Liu, Xinyuan, Gan, Zhitao, Lin, Zengshun et al.2025 · 5 citationsPeerJ. 2024;12:e18471
Etiological diagnostic performance of probe capture-based targeted next-generation sequencing in bloodstream infection.38738241 · Cai, Sishi, Yuan, Jianying, Li, Yingzhen et al.2024 · 36 citationsJournal of thoracic disease. 2024;16(4):2539-2549
A novel synthetic nucleic acid mixture for quantification of microbes by mNGS.38358316 · Wanghu, Hailing, Li, Yingzhen, Huang, Jin et al.2024 · 3 citationsMicrobial genomics. 2024;10(2)
Efficacy and safety of oral Chinese patent medicines in the treatment of coronary heart disease combined with hyperlipidemia: a systematic review and network meta-analysis of 78 trials.38093294 · Yang, Zhenyu, Li, Jixin, Zhou, Bogeng et al.2023 · 12 citationsChinese medicine. 2023;18(1):162
Dynamic obstacle detection method based on U-V disparity and residual optical flow for autonomous driving.37165106 · Yuan, Jianying, Jiang, Tao, He, Xi et al.2023 · 17 citationsScientific reports. 2023;13(1):7630
Evaluation of superinfection, antimicrobial usage, and airway microbiome with metagenomic sequencing in COVID-19 patients: A cohort study in Shanghai.34103263 · Miao, Qing, Ma, Yuyan, Ling, Yun et al.2021 · 32 citationsJournal of microbiology, immunology, and infection = Wei mian yu gan ran za zhi. 2021;54(5):808-815
Genomic characterisation and epidemiology of 2019 novel coronavirus: implications for virus origins and receptor binding.32007145 · Lu, Roujian, Zhao, Xiang, Li, Juan et al.2020 · 11,845 citationsLancet (London, England). 2020;395(10224):565-574
Genome Sequencing Explores Complexity of Chromosomal Abnormalities in Recurrent Miscarriage.31679651 · Dong, Zirui, Yan, Junhao, Xu, Fengping et al.2020 · 105 citationsAmerican journal of human genetics. 2019;105(6):1102-1111
Diminishing microbiome richness and distinction in the lower respiratory tract of lung cancer patients: A multiple comparative study design with independent validation.31494531 · Jin, Jing, Gan, Yuncui, Liu, Huayong et al.2020 · 99 citationsLung cancer (Amsterdam, Netherlands). 2019;136:129-135
A Resolution-Free Parallel Algorithm for Image Edge Detection within the Framework of Enzymatic Numerical P Systems.30934868 · Yuan, Jianying, Guo, Dequan, Zhang, Gexiang et al.2019 · 15 citationsMolecules (Basel, Switzerland). 2019;24(7)
Balanced Chromosomal Rearrangement Detection by Low-Pass Whole-Genome Sequencing.29364520 · Dong, Zirui, Ye, Lingfei, Yang, Zhenjun et al.2019 · 18 citationsCurrent protocols in human genetics. 2018;96:8.18.1-8.18.16
Identification of balanced chromosomal rearrangements previously unknown among participants in the 1000 Genomes Project: implications for interpretation of structural variation in genomes and the future of clinical cytogenetics.29095815 · Dong, Zirui, Wang, Huilin, Chen, Haixiao et al.2018 · 74 citationsGenetics in medicine : official journal of the American College of Medical Genetics. 2018;20(7):697-707
BMPR1B mutation causes Pierre Robin sequence.28418932 · Yang, Yongjia, Yuan, Jianying, Yao, Xu et al.2018 · 23 citationsOncotarget. 2017;8(16):25864-25871
Erratum: SOAPdenovo2: an empirically improved memory-efficient short-read de novo assembler.26161257 · Luo, Ruibang, Liu, Binghang, Xie, Yinlong et al.2016 · 269 citationsGigaScience. 2015;4:30
Reflective long-period fiber grating-based sensor with Sagnac fiber loop mirror for simultaneous measurement of refractive index and temperature.25322436 · Yuan, Jianying, Zhao, Chun-Liu, Zhou, Yumeng et al.2015 · 29 citationsApplied optics. 2014;53(29):H85-90
A flexile and high precision calibration method for binocular structured light scanning system.25202736 · Yuan, Jianying, Wang, Qiong, Li, Bailin2015 · 3 citationsTheScientificWorldJournal. 2014;2014:753932
Assemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species.23870653 · Bradnam, Keith R, Fass, Joseph N, Alexandrov, Anton et al.2014 · 671 citationsGigaScience. 2013;2(1):10
SOAPdenovo2: an empirically improved memory-efficient short-read de novo assembler.23587118 · Luo, Ruibang, Liu, Binghang, Xie, Yinlong et al.2013 · 5,309 citationsGigaScience. 2012;1(1):18
COPE: an accurate k-mer-based pair-end reads connection tool to facilitate genome assembly.23044551 · Liu, Binghang, Yuan, Jianying, Yiu, Siu-Ming et al.2013 · 138 citationsBioinformatics (Oxford, England). 2012;28(22):2870-4
pIRS: Profile-based Illumina pair-end reads simulator.22508794 · Hu, Xuesong, Yuan, Jianying, Shi, Yujian et al.2013 · 198 citationsBioinformatics (Oxford, England). 2012;28(11):1533-5
Comparison of the two major classes of assembly algorithms: overlap-layout-consensus and de-bruijn-graph.22184334 · Li, Zhenyu, Chen, Yanxiang, Mu, Desheng et al.2012 · 276 citationsBriefings in functional genomics. 2012;11(1):25-37
Career total: 70 works. 22 are in this corpus.
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