ML
Mark Lewis
Models, Biologicalq-bio.PEEcosystemq-bio.QMPopulation DynamicsecologyCOVID-19math.APModels, TheoreticalColeoptera
On Valency
published · living versionsW_puhnv9vn·v1 · currentpublished
Frequency-induced Tipping: Resonance-Driven Tipping in a Threshold Predator-Prey System
with Shan Gao, Silas Poloni, Hao Wang
1 version
Preprints & journals
191 papers in the corpus · 1989–2026Integrating animal experience into state-switching habitat selection models10.64898/2026.07.28.741089v1 · Dejeante, R., Kuperus, A., Lewis, M. A. et al.2026 · 0 citationsbioRxiv
Modeling stratified dispersal in forest pests: A case study of the mountain pine beetle in Alberta.41631857 · Johnson, Evan C, Brush, Micah, Lewis, Mark A2026 · 1 citationEcology. 2026;107(2):e70305
Biological Barriers to Forest Pest Invasions: A Novel Host Tree Slows Mountain Pine Beetle Range Expansion.41112023 · Johnson, Evan C, Musso, Antonia, Cullingham, Catherine et al.2025 · 4 citationsEcology and evolution. 2025;15(10):e72296
Deep learning for disease outbreak prediction: a parallel LSTM-CNN model.40829638 · Chakraborty, Amit K, Miry, Reza, Greiner, Russell et al.2025 · 6 citationsJournal of the Royal Society, Interface. 2025;22(229):20250046
Artificial Attractants: Implications for Disease Management in Deer.39981545 · Gritter, Kelsey, Pybus, Margo, Lewis, Mark A et al.2025 · 2 citationsEcology and evolution. 2025;15(2):e71013
Early detection of disease outbreaks and non-outbreaks using incidence data: A framework using feature-based time series classification and machine learning.39946412 · Gao, Shan, Chakraborty, Amit K, Greiner, Russell et al.2025 · 11 citationsPLoS computational biology. 2025;21(2):e1012782
Deep Learning for Disease Outbreak Prediction: A Robust Early Warning Signal for Transcritical Bifurcations2501.07764v1 · Reza Miry, Amit K. Chakraborty, Russell Greiner et al.2025 · 1 citationarXiv
Threshold-based disease treatment approach modulates economic, conservation and evolutionary trade-offs in sea louse-salmon aquaculture system.40487730 · Balstad, Laurinne J, Godwin, Sean C, Krkošek, Martin et al.2025 · 3 citationsTheoretical ecology. 2025;18(1):23
Eruptive Insect Outbreaks from Endemic Populations Under Climate Change.39715936 · Brush, Micah, Lewis, Mark A2024 · 1 citationBulletin of mathematical biology. 2024;87(1):16
An assessment of Alberta's strategy for controlling mountain pine beetle outbreaks2412.08786v2 · Evan C. Johnson, Mark A. Lewis2024 · 5 citationsarXiv
Modeling Mountain Pine Beetle Abundance in Novel Hosts10.1101/2024.11.21.624504v1 · Xie, X., Brush, M., Johnson, E. et al.2024 · 0 citationsbioRxiv
Identifying signals of memory from observations of animal movements.39558435 · Kim, Dongmin, Thompson, Peter R, Wolfson, David W et al.2026 · 15 citationsMovement ecology. 2024;12(1):72
Identifiability analysis of vaccination decision-making dynamics2411.01080v1 · Azadeh Aghaeeyan, Mark A. Lewis, Pouria Ramazi2024 · 0 citationsarXiv
Negative density-dependent dispersal of the mountain pine beetle in Alberta2410.09725v1 · Evan C. Johnson, Mark Lewis2024 · 0 citationsarXiv
Website visits can predict angler presence using machine learning2409.17425v2 · Julia S. Schmid, Sean Simmons, Mark A. Lewis (1 et al.2024 · 1 citationarXiv
Stratified dispersal explains mountain pine beetle's range expansion in Alberta2409.05320v2 · Evan C. Johnson, Micah Brush, Mark A. Lewis2024 · 0 citationsarXiv
Analyzing recreational fishing effort -- Gender differences and the impact of Covid-192409.07492v2 · Julia S. Schmid, Sean Simmons, Mark S. Poesch et al.2024 · 6 citationsarXiv
An early warning indicator trained on stochastic disease-spreading models with different noises.39118548 · Chakraborty, Amit K, Gao, Shan, Miry, Reza et al.2024 · 11 citationsJournal of the Royal Society, Interface. 2024;21(217):20240199
The majority of Canadians likely behaved as myopic rationalists rather than success-based learners when deciding on their first dose of COVID-19 vaccine.39114515 · Aghaeeyan, Azadeh, Ramazi, Pouria, Lewis, Mark A2024 · 1 citationFrontiers in public health. 2024;12:1406911
Modeling Mountain Pine Beetle Abundance and Distribution in a Changing Climate10.1101/2024.06.28.601294v1 · Xie, X., Brush, M., Lewis, M. A.2024 · 1 citationbioRxiv
Characterizing the speed and severity of mountain pine beetle spread under climate change with a mechanistic model10.1101/2024.06.27.601084v1 · Brush, M., Lewis, M. A.2024 · 1 citationbioRxiv
Revealing Decision-Making Strategies of Americans in Taking COVID-19 Vaccination.38727916 · Aghaeeyan, Azadeh, Ramazi, Pouria, Lewis, Mark A2024 · 7 citationsBulletin of mathematical biology. 2024;86(6):72
Early detection of disease outbreaks and non-outbreaks using incidence data2404.08893v1 · Shan Gao, Amit K. Chakraborty, Russell Greiner et al.2024 · 0 citationsarXiv
Webpage Views as a Proxy for Angler Pressure and Effort: Insights from Bayesian Networks2402.07964v3 · Azar Taheri Tayebi, Julia S. Schmid, Sean Simmons et al.2024 · 2 citationsarXiv
Can machine learning predict citizen-reported angler behavior?2402.06678v1 · Julia S. Schmid, Sean Simmons, Mark A. Lewis (1 et al.2024 · 0 citationsarXiv
Mountain pine beetle spread in forests with varying host resistance10.1101/2024.01.17.575462v2 · Brush, M., Lewis, M. A.2024 · 2 citationsbioRxiv
Simultaneous estimation of the temporal and spatial extent of animal migration using step lengths and turning angles.38191509 · Thompson, Peter R, Harrington, Peter D, Mallory, Conor D et al.2024 · 11 citationsMovement ecology. 2024;12(1):1
Positivity and global existence for nonlocal advection-diffusion models of interacting populations2312.09692v2 · Valeria Giunta, Thomas Hillen, Mark Lewis et al.2023 · 3 citationsarXiv
Coupling Mountain Pine Beetle and Forest Population Dynamics Predicts Transient Outbreaks that are Likely to Increase in Number with Climate Change.37775681 · Brush, Micah, Lewis, Mark A2026 · 9 citationsBulletin of mathematical biology. 2023;85(11):108
Weakly nonlinear analysis of a two-species non-local advection-diffusion system2305.14954v1 · Valeria Giunta, Thomas Hillen, Mark A. Lewis et al.2023 · 10 citationsarXiv
Next-generation matrices for marine metapopulations: The case of sea lice on salmon farms.37122768 · Harrington, Peter D, Cantrell, Danielle L, Lewis, Mark A2024 · 2 citationsEcology and evolution. 2023;13(4):e10027
Timing and probability of arrival for sea lice dispersing between salmon farms.36778949 · Harrington, Peter D, Cantrell, Danielle L, Foreman, Michael G G et al.2023 · 6 citationsRoyal Society open science. 2023;10(2):220853
A parametric model for estimating the timing and intensity of animal migration10.1101/2023.01.05.522924v1 · Thompson, P. R., Harrington, P. D., Mallory, C. D. et al.2023 · 0 citationsbioRxiv
An Equity Response to COVID-19 in Allegheny County, Pennsylvania: The Development and Work of the Black Equity Coalition.36367291 · Gary-Webb, Tiffany L, Van Dyke, Carlyn, Abrams, Karen et al.2023 · 3 citationsHealth promotion practice. 2023;24(5):828-840
From Policy to Prediction: Forecasting COVID-19 Dynamics Under Imperfect Vaccination.35857207 · Wang, Xiunan, Wang, Hao, Ramazi, Pouria et al.2022 · 31 citationsBulletin of mathematical biology. 2022;84(9):90
Detecting minimum energy states and multi-stability in nonlocal advection-diffusion models for interacting species2206.07398v2 · Valeria Giunta, Thomas Hillen, Mark A. Lewis et al.2022 · 19 citationsarXiv
Calculating the timing and probability of arrival for sea lice dispersing between salmon farms2206.07187v1 · Peter D. Harrington, Danielle L. Cantrell, Michael G. G. Foreman et al.2022 · 1 citationarXiv
Host Diversification May Split Epidemic Spread into Two Successive Fronts Advancing at Different Speeds.35598221 · Hamelin, F M, Mammeri, Y, Aigu, Y et al.2022 · 10 citationsBulletin of mathematical biology. 2022;84(7):68
Spreading speed of chronic wasting disease across deer groups with overlapping home ranges.35490762 · Xu, Jingjing, Merrill, Evelyn H, Lewis, Mark A2022 · 23 citationsJournal of theoretical biology. 2022;547:111135
Time-dependent memory and individual variation in Arctic brown bears (Ursus arctos).35410401 · Thompson, Peter R, Lewis, Mark A, Edwards, Mark A et al.2022 · 14 citationsMovement ecology. 2022;10(1):18
A Hypothesis-Free Bridging of Disease Dynamics and Non-pharmaceutical Policies.35394257 · Wang, Xiunan, Wang, Hao, Ramazi, Pouria et al.2022 · 19 citationsBulletin of mathematical biology. 2022;84(5):57
Energy-based step selection analysis: Modelling the energetic drivers of animal movement and habitat use.35277858 · Klappstein, Natasha J, Potts, Jonathan R, Michelot, Théo et al.2022 · 37 citationsThe Journal of animal ecology. 2022;91(5):946-957
Beyond resource selection: emergent spatio-temporal distributions from animal movements and stigmergent interactions10.1101/2022.02.28.482253v3 · Potts, J. R., Giunta, V., Lewis, M. A.2022 · 10 citationsbioRxiv
A Fisher-KPP Model with a Nonlocal Weighted Free Boundary: Analysis of How Habitat Boundaries Expand, Balance or Shrink.35084578 · Feng, Chunxi, Lewis, Mark A, Wang, Chuncheng et al.2022 · 16 citationsBulletin of mathematical biology. 2022;84(3):34
A longitudinal dataset of incidence and intervention policy impacts regarding the COVID-19 pandemic in Canadian provinces.34568531 · Keshteli, Ammar Hassanzadeh, Allen, Dana, Anjum, Afia et al.2021 · 3 citationsData in brief. 2021;38:107381
Predicting insect outbreaks using machine learning: A mountain pine beetle case study.34646449 · Ramazi, Pouria, Kunegel-Lion, Mélodie, Greiner, Russell et al.2023 · 41 citationsEcology and evolution. 2021;11(19):13014-13028
Dataset of COVID-19 outbreak and potential predictive features in the USA.34522726 · Haratian, Arezoo, Fazelinia, Hadi, Maleki, Zeinab et al.2024 · 14 citationsData in brief. 2021;38:107360
Coupling the socio-economic and ecological dynamics of cyanobacteria: single lake and network dynamics2108.06360v1 · Christopher M. Heggerud, Hao Wang, Mark A. Lewis2021 · 12 citationsarXiv
Accurate long-range forecasting of COVID-19 mortality in the USA.34226584 · Ramazi, Pouria, Haratian, Arezoo, Meghdadi, Maryam et al.2021 · 26 citationsScientific reports. 2021;11(1):13822
Local and Global Existence for Non-local Multi-Species Advection-Diffusion Models2106.06383v1 · Valeria Giunta, Thomas Hillen, Mark A. Lewis et al.2021 · 0 citationsarXiv
Career total: 464 works. 191 are in this corpus.Showing the 50 most recent.
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