CC

Chaoran Cheng

0000-0001-8128-5260

cs.LGcs.AIcs.CVMK-801Mutationq-bio.BMstat.MLAdaptation, Biologicalanimal behavior and cognitionArtificial Intelligence

On Valency

published · living versions

MutAtlas: A PDB-Wide Energy-Guided Atlas of Protein Mutation Effects

with Ruihan Guo, Zhanghan Ni, Neil He, Bangji Yang +1

1 version

W_322w8tcjv1 · current

Preprints & journals

27 papers in the corpus · 2017–2026

Accurate de novo design of peptides from programming biophysical landscape

Li, M., Liu, Y., Zhong, J. et al.

0 citations

10.64898/2026.06.08.731011v12026bioRxiv

Learning Protein Structure Representation with Orientation-Aware Networks.

Li, Jiahan, Luo, Shitong, Deng, Congyue et al.

0 citations

414681572025Journal of computational biology : a journal of computational molecular cell biology. 2025

Ventral hippocampus and NAc core, but not shell activity is required for well-learned instrumental memory destabilisation.

Lima, Ramon Hypolito, Cheng, Chaoran, Lee, Jonathan L C

0 citations

410728492025Behavioural brain research. 2026;496:115868

Ventral Hippocampus and NAc Core, but not Shell activity is required for well-learned instrumental memory destabilization

Hypolito Lima, R., Cheng, C., Lee, J.

0 citations

10.1101/2025.05.21.654887v12025bioRxiv

$\alpha$ -Flow: A Unified Framework for Continuous-State Discrete Flow Matching Models

Chaoran Cheng, Jiahan Li, Jiajun Fan et al.

1 citation

2504.10283v12025arXiv

Author Correction: Ab initio characterization of protein molecular dynamics with AI2BMD.

Wang, Tong, He, Xinheng, Li, Mingyu et al.

4 citations

397539052026Nature. 2025;637(8047):E25

Gradient-Free Generation for Hard-Constrained Systems

Chaoran Cheng, Boran Han, Danielle C. Maddix et al.

0 citations

2412.01786v22024arXiv

Geometric Point Attention Transformer for 3D Shape Reassembly

Jiahan Li, Chaoran Cheng, Jianzhu Ma et al.

1 citation

2411.17788v22024arXiv

Ab initio characterization of protein molecular dynamics with AI2BMD.

Wang, Tong, He, Xinheng, Li, Mingyu et al.

166 citations

395061102024Nature. 2024;635(8040):1019-1027

Training Free Guided Flow Matching with Optimal Control

Luran Wang, Chaoran Cheng, Yizhen Liao et al.

1 citation

2410.18070v32024arXiv

Full-Atom Peptide Design based on Multi-modal Flow Matching

Jiahan Li, Chaoran Cheng, Zuofan Wu et al.

3 citations

2406.00735v12024arXiv

Categorical Flow Matching on Statistical Manifolds

Chaoran Cheng, Jiahan Li, Jian Peng et al.

6 citations

2405.16441v42024arXiv

Equivariant Neural Operator Learning with Graphon Convolution

Chaoran Cheng, Jian Peng

1 citation

2311.10908v12023arXiv

Influence of knee flexion on early femoral fracture healing: A combined analysis of musculoskeletal dynamics and finite elements.

Cheng, Chaoran, Zhang, Junxia, Jia, Jun et al.

8 citations

375862962023Computer methods and programs in biomedicine. 2023;241:107757

Procedures between training and reactivation influence the destabilization of instrumental sucrose memory.

Cheng, Chaoran, Exton-McGuinness, Marc T J, Lee, Jonathan L C

4 citations

361873752025Frontiers in behavioral neuroscience. 2022;16:953629

Equivariant Point Cloud Analysis via Learning Orientations for Message Passing

Shitong Luo, Jiahan Li, Jiaqi Guan et al.

32 citations

2203.14486v12022arXiv

Orientation-Aware Graph Neural Networks for Protein Structure Representation Learning

Jiahan Li, Shitong Luo, Congyue Deng et al.

4 citations

2201.13299v62022arXiv

NUMB as a Therapeutic Target for Melanoma.

Hristova, Denitsa M, Fukumoto, Takeshi, Takemori, Chihiro et al.

9 citations

348830442022The Journal of investigative dermatology. 2022;142(7):1882-1892.e5

Neural Crest-Like Stem Cell Transcriptome Analysis Identifies LPAR1 in Melanoma Progression and Therapy Resistance.

Liu, Jianglan, Rebecca, Vito W, Kossenkov, Andrew V et al.

25 citations

344622762022Cancer research. 2021;81(20):5230-5241

Enhancing KDM5A and TLR activity improves the response to immune checkpoint blockade.

Wang, Liangliang, Gao, Yan, Zhang, Gao et al.

54 citations

329080022021Science translational medicine. 2020;12(560)

DeepVar: An End-to-End Deep Learning Approach for Genomic Variant Recognition in Biomedical Literature

Chaoran Cheng, Fei Tan, Zhi Wei

8 citations

2006.08338v12020arXiv

A Fatty Acid Oxidation-dependent Metabolic Shift Regulates the Adaptation of BRAF-mutated Melanoma to MAPK Inhibitors.

Aloia, Andrea, Müllhaupt, Daniela, Chabbert, Christophe D et al.

130 citations

313755152020Clinical cancer research : an official journal of the American Association for Cancer Research. 2019;25(22):6852-6867

Author Correction: PAK signalling drives acquired drug resistance to MAPK inhibitors in BRAF-mutant melanomas.

Lu, Hezhe, Liu, Shujing, Zhang, Gao et al.

1 citation

305320032026Nature. 2019;565(7738):E4

Co-targeting BET and MEK as salvage therapy for MAPK and checkpoint inhibitor-resistant melanoma.

Echevarría-Vargas, Ileabett M, Reyes-Uribe, Patricia I, Guterres, Adam N et al.

87 citations

296508052019EMBO molecular medicine. 2018;10(5)

Induction of Telomere Dysfunction Prolongs Disease Control of Therapy-Resistant Melanoma.

Zhang, Gao, Wu, Lawrence W, Mender, Ilgen et al.

45 citations

295631392019Clinical cancer research : an official journal of the American Association for Cancer Research. 2018;24(19):4771-4784

Ex Vivo Profiling of PD-1 Blockade Using Organotypic Tumor Spheroids.

Jenkins, Russell W, Aref, Amir R, Lizotte, Patrick H et al.

592 citations

291011622019Cancer discovery. 2018;8(2):196-215

PAK signalling drives acquired drug resistance to MAPK inhibitors in BRAF-mutant melanomas.

Lu, Hezhe, Liu, Shujing, Zhang, Gao et al.

169 citations

289538872018Nature. 2017;550(7674):133-136

Career total: 93 works. 27 are in this corpus.

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