DK
Daniel S. Katz
cs.DCcs.SEcs.CYhep-exSoftwareastro-ph.IMcs.DLcs.LGgr-qcastro-ph.HE
On Valency
published · living versionsW_8r7kk6e7·v1 · currentpublished
The challenge and promise of software citation for credit, identification, discovery, and reuse
with Kyle E. Niemeyer, Arfon M. Smith
1 version
W_kb68qpzw·v1published
Preprints & journals
104 papers in the corpus · 1992–2026Understanding and advancing research software grant funding models.41458369 · Katz, Daniel S, Jensen, Eric A, Barker, Michelle2026 · 1 citationOpen research Europe. 2025;5:199
Technology Research Software: An Often Overlooked Category of Research Software2604.17506v1 · Wilhelm Hasselbring, Daniel S. Katz, Rob van Nieuwpoort2026 · 3 citationsComputing in Science & Engineering, vol. 28, no. 1, pp. 94-99, Jan.-March 2026
How generative AI is shaping research software development and maintenance at a research-intensive university.41869273 · Besser, Stephanie A, Jensen, Eric A, Katz, Daniel S2026 · 0 citationsOpen research Europe. 2026;6:56
Evolving funding strategies for research software: Insights from an international survey of research funders.40839678 · Jensen, Eric A, Katz, Daniel S2025 · 2 citationsPloS one. 2025;20(8):e0329833
Ten simple rules for PIs to integrate Research Software Engineering into their research group2506.20217v1 · Stuart M. Allen, Neil Chue Hong, Stephan Druskat et al.2025 · 0 citationsarXiv
A Terminology for Scientific Workflow Systems2506.07838v6 · Fr'ed'eric Suter, Taina Coleman, İlkay Altintas et al.2025 · 21 citationsarXiv
Cycling on the Freeway: The perilous state of open-source neuroscience software.40800958 · Westner, Britta U, McCloy, Daniel R, Larson, Eric et al.2025 · 6 citationsImaging neuroscience (Cambridge, Mass.). 2025;3
Open-Source and FAIR Research Software for Proteomics.40267229 · Perez-Riverol, Yasset, Bittremieux, Wout, Noble, William S et al.2025 · 21 citationsJournal of proteome research. 2025;24(5):2222-2234
Awareness of FAIR and FAIR4RS among international research software funders.40234516 · Jensen, Eric A, Katz, Daniel S2025 · 6 citationsScientific data. 2025;12(1):627
Strategic priorities and challenges in research software funding: Results from an international survey.39916985 · Jensen, Eric A, Katz, Daniel S2025 · 4 citationsF1000Research. 2024;13:1447
Parsl+CWL: Towards Combining the Python and CWL Ecosystems2412.08062v1 · Nishchay Karle, Ben Clifford, Yadu Babuji et al.2024 · 2 citationsarXiv
Thoughts on Learning Human and Programming Languages2407.15907v1 · Daniel S. Katz, Jeffrey C. Carver2024 · 0 citationsarXiv
Training Next Generation AI Users and Developers at NCSA2406.14744v1 · Daniel S. Katz, Volodymyr Kindratenko, Olena Kindratenko et al.2024 · 0 citationsarXiv
FAIR-USE4OS: Guidelines for creating impactful open-source software.38722873 · Sonabend, Raphael, Gruson, Hugo, Wolansky, Leo et al.2024 · 6 citationsPLoS computational biology. 2024;20(5):e1012045
Special issue on software citation, indexing, and discoverability.38660149 · Katz, Daniel S, Chue Hong, Neil P2024 · 2 citationsPeerJ. Computer science. 2024;10:e1951
Group authorship, an excellent opportunity laced with ethical, legal and technical challenges.38445637 · Hosseini, Mohammad, Holcombe, Alex O, Kovacs, Marton et al.2025 · 16 citationsAccountability in research. 2025;32(5):762-784
Leveraging Large Language Models to Build and Execute Computational Workflows2312.07711v1 · Alejandro Duque, Abdullah Syed, Kastan V. Day et al.2023 · 3 citationsarXiv
Journal Production Guidance for Software and Data Citations.37752153 · Stall, Shelley, Bilder, Geoffrey, Cannon, Matthew et al.2023 · 19 citationsScientific data. 2023;10(1):656
Software Citation in HEP: Current State and Recommendations for the Future2309.14571v2 · Matthew Feickert, Daniel S. Katz, Mark S. Neubauer et al.2023 · 1 citationarXiv
An Open Community-Driven Model For Sustainable Research Software: Sustainable Research Software Institute2308.14953v2 · Gregory R. Watson, Addi Malviya-Thakur, Daniel S. Katz et al.2023 · 1 citationarXiv
Transitioning ECP Software Technology into a Foundation for Sustainable Research Software2308.14954v2 · Gregory R. Watson, Addi Malviya-Thakur, Daniel S. Katz et al.2023 · 0 citationsarXiv
Research Software Engineering in 20302308.07796v3 · Daniel S. Katz, Simon Hettrick2023 · 2 citationsarXiv
FAIR for AI: An interdisciplinary and international community building perspective.37495591 · Huerta, E A, Blaiszik, Ben, Brinson, L Catherine et al.2023 · 94 citationsScientific data. 2023;10(1):487
Wanted: standards for automatic reproducibility of computational experiments2307.11383v1 · Samuel Grayson, Reed Milewicz, Joshua Teves et al.2023 · 0 citationsarXiv
Policy recommendations to ensure that research software is openly accessible and reusable.37478129 · McKiernan, Erin C, Barba, Lorena, Bourne, Philip E et al.2023 · 14 citationsPLoS biology. 2023;21(7):e3002204
The Changing Role of RSEs over the Lifetime of Parsl2307.11060v2 · Daniel S. Katz, Ben Clifford, Yadu Babuji et al.2023 · 0 citationsarXiv
Fine-grained Policy-driven I/O Sharing for Burst Buffers2306.11615v1 · Ed Karrels, Lei Huang, Yuhong Kan et al.2023 · 6 citationsarXiv
Workflows Community Summit 2022: A Roadmap Revolution2304.00019v1 · Rafael Ferreira da Silva, Rosa M. Badia, Venkat Bala et al.2023 · 28 citationsarXiv
Overcoming Challenges to Continuous Integration in HPC2303.17034v1 · Todd Gamblin, Daniel S. Katz2023 · 10 citationsarXiv
FAIR AI Models in High Energy Physics2212.05081v3 · Javier Duarte, Haoyang Li, Avik Roy et al.2022 · 12 citationsMach. Learn.: Sci. Technol. 4 (2023) 045062
Giving RSEs a Larger Stage through the Better Scientific Software Fellowship2211.07436v2 · William F. Godoy, Ritu Arora, Keith Beattie et al.2022 · 3 citationsarXiv
Introducing the FAIR Principles for research software.36241754 · Barker, Michelle, Chue Hong, Neil P, Katz, Daniel S et al.2022 · 489 citationsScientific data. 2022;9(1):622
Research Software Engineers: Career Entry Points and Training Gaps2210.04275v2 · Ian A. Cosden, Kenton McHenry, Daniel S. Katz2022 · 15 citationsarXiv
funcX: Federated Function as a Service for Science2209.11631v1 · Zhuozhao Li, Ryan Chard, Yadu Babuji et al.2022 · 34 citationsarXiv
A survey of the state of the practice for research software in the United States.35634111 · Carver, Jeffrey C, Weber, Nic, Ram, Karthik et al.2026 · 54 citationsPeerJ. Computer science. 2022;8:e963
Extended Abstract: Productive Parallel Programming with Parsl2205.01527v2 · Kyle Chard, Yadu Babuji, Anna Woodard et al.2022 · 0 citationsACM SIGAda Ada Letters 40 (2), 73-75, 2020
A FAIR and AI-ready Higgs boson decay dataset.35165298 · Chen, Yifan, Huerta, E A, Duarte, Javier et al.2024 · 33 citationsScientific data. 2022;9(1):31
Improving Academic Performance and Retention of First-Year Biology Students through a Scalable Peer Mentorship Program.34618540 · Wilton, Mike, Katz, Daniel, Clairmont, Anthony et al.2021 · 20 citationsCBE life sciences education. 2021;20(4):ar63
A Community Roadmap for Scientific Workflows Research and Development2110.02168v2 · Rafael Ferreira da Silva, Henri Casanova, Kyle Chard et al.2021 · 49 citationsarXiv
Extreme Scale Survey Simulation with Python Workflows2109.12060v1 · A.S. Villarreal, Yadu Babuji, Tom Uram et al.2021 · 0 citationsarXiv
Toward Interlanguage Parallel Scripting for Distributed-Memory Scientific Computing2107.02841v1 · Justin M. Wozniak, Timothy G. Armstrong, Ketan C. Maheshwari et al.2021 · 3 citationsarXiv
Toward Interoperable Cyberinfrastructure: Common Descriptions for Computational Resources and Applications2107.00417v1 · Joe Stubbs, Suresh Marru, Daniel Mejia et al.2021 · 2 citationsarXiv
Workflows Community Summit: Advancing the State-of-the-art of Scientific Workflows Management Systems Research and Development2106.05177v1 · Rafael Ferreira da Silva, Henri Casanova, Kyle Chard et al.2021 · 15 citationsarXiv
Erratum: Taking a fresh look at FAIR for research software.34027503 · Katz, Daniel S, Gruenpeter, Morane, Honeyman, Tom2021 · 6 citationsPatterns (New York, N.Y.). 2021;2(5):100267
Workflows Community Summit: Bringing the Scientific Workflows Community Together2103.09181v1 · Rafael Ferreira da Silva, Henri Casanova, Kyle Chard et al.2021 · 26 citationsarXiv
Taking a fresh look at FAIR for research software.33748799 · Katz, Daniel S, Gruenpeter, Morane, Honeyman, Tom2021 · 69 citationsPatterns (New York, N.Y.). 2021;2(3):100222
Addressing Research Software Sustainability via Institutes2103.03690v1 · Daniel S. Katz, Jeffrey C. Carver, Neil P. Chue Hong et al.2021 · 6 citationsarXiv
Software Training in HEP.34642648 · Malik, Sudhir, Meehan, Samuel, Lieret, Kilian et al.2021 · 6 citationsComputing and software for big science. 2021;5(1):22
Nine Best Practices for Research Software Registries and Repositories: A Concise Guide2012.13117v1 · Task Force on Best Practices for Software Registries: Alain Monteil, Alejandra Gonzalez-Beltran, Alexandros Ioannidis et al.2020 · 5 citationsarXiv
Software must be recognised as an important output of scholarly research2011.07571v1 · Caroline Jay, Robert Haines, Daniel S. Katz2020 · 19 citationsarXiv
Career total: at least 770 works. 104 are in this corpus.Showing the 50 most recent.
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