AP
Alison M. Pouch
Echocardiography, Three-Dimensional3D echocardiographycs.CVModels, CardiovascularechocardiographyEchocardiographyAortic valveeess.IVHeart Valve DiseasesMedial axis representation
On Valency
published · living versionsW_y5x989cd·v1 · currentpublished
A Differentiable, GPU-Accelerated Finite-Element Formulation in JAX for Large-Deformation Shells with Contact: Application to Patient-Specific Aortic Valve Simulation
with Mohsen Nakhaei, Matthew A. Jolley, Wensi Wu
1 version
W_48dtrymw·v1published
Preprints & journals
81 papers in the corpus · 2007–2026Toward Reliable Patient-Specific Aortic Strain Mapping from 4D CTA: Validation, Spectral Structure, and Clinical Potential.42926746 · Lobo, Tricia, Wu, Wensi, Litt, Harold I et al.2026 · 0 citationsArXiv. 2026
Bridging Biomedical Atlas Ecosystem: Cross-Atlas Alignment And Scalable Tissue Specimen Registration10.64898/2026.08.13.744704v1 · Jain, Y., Desai, B., Qaurooni, D. et al.2026 · 0 citationsbioRxiv
Bayesian Posterior Sampling for Synthetic Shape Generation of Heart Valves2607.28914v1 · Vijay Dubey, Sumedh Seetharam, Nikos Manthatis et al.2026 · 0 citationsarXiv
A Geometric Feature Tracking Approach for Noninvasive Patient-Specific Estimation of Leaflet Strain from 3D Images of Heart Valves.42435266 · Wu, Wensi, Daemer, Matthew, Weiss, Jeffrey A et al.2026 · 0 citationsAnnals of biomedical engineering. 2026
VFMStitch: A Vision-Foundation-Model Empowered Framework for 3D Ultrasound Stitching via Geometric-Semantic Feature Fusion.42403923 · Yao, Xing, DiSanto, Nick, Yu, Runxuan et al.2026 · 0 citationsProceedings of machine learning research. 2026;315:2621-2639
Biomechanically Informed Image Registration for Patient-Specific Aortic Valve Strain Analysis.42334707 · Nakhaei, Mohsen, Pouch, Alison M, Amin, Silvani et al.2026 · 0 citationsAnnals of biomedical engineering. 2026
EchoVQA: Enabling Conversational Assistance for Point-of-Care Cardiac Ultrasound2605.24159v1 · Filippos Bellos, Yutong Li, Jessie N Dong et al.2026 · 0 citationsarXiv
MUSiK: An Open Source Simulation Library for 3D Multi-View Ultrasound.40907042 · Chan, Trevor J, Nair-Kanneganti, Aparna, Anthony, Brian et al.2026 · 0 citationsIEEE transactions on bio-medical engineering. 2026;73(4):1390-1400
Follow Your Heart: Landmark-Guided Transducer Pose Scoring for Point-of-Care Echocardiography2603.27143v1 · Zaiyang Guo, Jessie N. Dong, Filippos Bellos et al.2026 · 0 citationsarXiv
The In-Situ Mechanics of the Tricuspid Valve: Strain Heterogeneity and Anisotropy via 3D Digital Image Correlation.42147772 · LaRue, Trace G, Haese, Collin E, Pouch, Alison M et al.2026 · 3 citationsExperimental mechanics. 2026
Biomechanically Informed Image Registration for Patient-Specific Aortic Valve Strain Analysis.41542166 · Nakhaei, Mohsen, Pouch, Alison M, Amin, Silvani et al.2026 · 0 citationsArXiv. 2026
From Geometry to Intensity: A Coarse-to-Fine Pipeline for Unsupervised 3D Ultrasound Stitching.42404103 · Yao, Xing, Yu, Runxuan, Lu, Daiwei et al.2026 · 0 citationsProceedings of SPIE--the International Society for Optical Engineering. 2026;13925
Proof-of-Concept Automated Framework for Intraoperative Transesophageal Echocardiography: View Classification and Biventricular Function Assessment.41724654 · Chan, Trevor, Goldfinger, Shir, Grasfield, Rachel Hannah et al.2026 · 4 citationsJournal of cardiothoracic and vascular anesthesia. 2026;40(5):1339-1348
CT-based visualization of aortic valve morphology: from 3D energy-integrating CT to 4D photon counting CT.41602341 · Pouch, Alison M, Dong, Jessie N, Litt, Harold I et al.2026 · 1 citationFrontiers in cardiovascular medicine. 2025;12:1721746
SEGMENTATION CONFIDENCE FOR ARBITRARY CNNS.42416972 · Oguz, Baris, Yao, Xing, Tawil, Claudia et al.2026 · 0 citationsProceedings. IEEE International Symposium on Biomedical Imaging. 2026;2026
LOTUS: Latent Outpainting Diffusion Model for Three-Dimensional Ultrasound Stitching.42422055 · Yao, Xing, Yu, Runxuan, DiSanto, Nick et al.2026 · 0 citationsProceedings of machine learning research. 2026;306:1740-1754
Increasing LLM response trustworthiness using voting ensembles2510.04048v1 · Aparna Nair-Kanneganti, Trevor J. Chan, Shir Goldfinger et al.2025 · 0 citationsarXiv
Streamlining 4D Cardiac Image Workflows: Open-Source Tools for Segmentation, Registration, and Visualization.41668727 · Hao, Jilei, Yushkevich, Paul A, Dong, Ningjun J et al.2026 · 0 citationsFunctional imaging and modeling of the heart : ... International Workshop, FIMH ..., proceedings. FIMH (Conference). 2025;15673:161-173
A noninvasive method for determining elastic parameters of valve tissue using physics-informed neural networks.40436231 · Wu, Wensi, Daneker, Mitchell, Herz, Christian et al.2025 · 3 citationsActa biomaterialia. 2025;200:283-298
Dynamic Segmentation of Three-Dimensional Transesophageal Echocardiography Using an Automated Neural Network for Transcatheter Edge-to-Edge Repair.40222635 · Frost, Charlotte L, Vidula, Mahesh, Hu, Ray et al.2025 · 0 citationsJournal of the American Society of Echocardiography : official publication of the American Society of Echocardiography. 2025;38(8):725-728
SYNSTITCH: A SELF-SUPERVISED LEARNING NETWORK FOR ULTRASOUND IMAGE STITCHING USING SYNTHETIC TRAINING PAIRS AND INDIRECT SUPERVISION.40539076 · Yao, Xing, Yu, Runxuan, Hu, Dewei et al.2026 · 1 citationProceedings. IEEE International Symposium on Biomedical Imaging. 2025;2025
TOWARDS PATIENT-SPECIFIC SURGICAL PLANNING FOR BICUSPID AORTIC VALVE REPAIR: FULLY AUTOMATED SEGMENTATION OF THE AORTIC VALVE IN 4D CT.40630832 · Guo, Zaiyang, Dong, Ningjun J, Litt, Harold et al.2025 · 4 citationsProceedings. IEEE International Symposium on Biomedical Imaging. 2025;2025
Automated structured data extraction from intraoperative echocardiography reports using large language models.40037947 · MacKay, Emily J, Goldfinger, Shir, Chan, Trevor J et al.2025 · 16 citationsBritish journal of anaesthesia. 2025;134(5):1308-1317
ADEPT: A Noninvasive Method for Determining Elastic Parameters of Valve Tissue.39990796 · Wu, Wensi, Daneker, Mitchell, Herz, Christian et al.2026 · 0 citationsArXiv. 2025
PRISM Lite: A lightweight model for interactive 3D placenta segmentation in ultrasound.40463735 · Li, Hao, Oguz, Baris, Arenas, Gabriel et al.2026 · 0 citationsProceedings of SPIE--the International Society for Optical Engineering. 2025;13406
Tricuspid valve edge-to-edge repair simulations are highly sensitive to annular boundary conditions.39742687 · Haese, Collin E, Dubey, Vijay, Mathur, Mrudang et al.2025 · 7 citationsJournal of the mechanical behavior of biomedical materials. 2025;163:106879
Interactive Segmentation Model for Placenta Segmentation from 3D Ultrasound images.40463734 · Li, Hao, Oguz, Baris, Arenas, Gabriel et al.2026 · 0 citationsSimplifying medical ultrasound. International Workshop on Advances in Simplifying Medical Ultrasound. 2025;15186:132-142
ADEPT: A Noninvasive Method for Determining Elastic Parameters of Valve Tissue2409.19081v2 · Wensi Wu, Mitchell Daneker, Christian Herz et al.2024 · 0 citationsarXiv
Editorial: Mitral valve disease: mechanisms to therapies.38957331 · Nunes, Maria Carmo Pereira, Hatoum, Hoda, Pouch, Alison M et al.2024 · 1 citationFrontiers in cardiovascular medicine. 2024;11:1441511
SAM3D: Zero-Shot Semi-Automatic Segmentation in 3D Medical Images with the Segment Anything Model2405.06786v2 · Trevor J. Chan, Aarush Sahni, Yijin Fang et al.2024 · 1 citationarXiv
Open-source graphical user interface for the creation of synthetic skeletons for medical image analysis.38751729 · Herz, Christian, Vergnet, Nicolas, Tian, Sijie et al.2025 · 2 citationsJournal of medical imaging (Bellingham, Wash.). 2024;11(3):036001
A Computational Pipeline for Patient-Specific Prediction of the Postoperative Mitral Valve Functional State.37382900 · Liu, Hao, Simonian, Natalie T, Pouch, Alison M et al.2023 · 18 citationsJournal of biomechanical engineering. 2023;145(11)
Patient-Specific Quantitative In-Vivo Assessment of Human Mitral Valve Leaflet Strain Before and After MitraClip Repair.37670097 · Simonian, Natalie T, Liu, Hao, Vakamudi, Sneha et al.2023 · 12 citationsCardiovascular engineering and technology. 2023;14(5):677-693
Strain estimation in aortic roots from 4D echocardiographic images using medial modeling and deformable registration.37060701 · Aggarwal, Ankush, Mortensen, Peter, Hao, Jilei et al.2023 · 8 citationsMedical image analysis. 2023;87:102804
Quantitative in vivo assessment of human mitral valve coaptation area after undersized ring annuloplasty repair for ischemic mitral regurgitation.36510522 · Simonian, Natalie T, Liu, Hao, Pouch, Alison M et al.2024 · 12 citationsJTCVS techniques. 2022;16:49-59
Anatomic nomenclature and 3-dimensional regional model of the human ovary: call for a new paradigm.36191605 · O'Neill, Kathleen E, Maher, Jacqueline Y, Laronda, Monica M et al.2023 · 28 citationsAmerican journal of obstetrics and gynecology. 2023;228(3):270-275.e4
Truncal Valve Repair: 3-Dimensional Imaging and Modeling to Enhance Preoperative Surgical Planning.36093770 · Williams, Trevor R, Cianciulli, Alana R, Wang, Yan et al.2022 · 3 citationsCirculation. Cardiovascular imaging. 2022;15(12):e014424
Fully Automated 3D Segmentation and Diffeomorphic Medial Modeling of the Left Ventricle Mitral Valve Complex in Ischemic Mitral Regurgitation.35772323 · Aly, Ahmed H, Khandelwal, Pulkit, Aly, Abdullah H et al.2022 · 14 citationsMedical image analysis. 2022;80:102513
Patient-Specific Quantification of Normal and Bicuspid Aortic Valve Leaflet Deformations from Clinically Derived Images.34993699 · Rego, Bruno V, Pouch, Alison M, Gorman, Joseph H et al.2022 · 12 citationsAnnals of biomedical engineering. 2022;50(1):1-15
Local aortic aneurysm wall expansion measured with automated image analysis.35146458 · Stoecker, Jordan B, Eddinger, Kevin C, Pouch, Alison M et al.2022 · 8 citationsJVS-vascular science. 2022;3:48-63
The Hyperattenuating Crescent Sign Is Not Necessarily a Sign of Impending Aortic Aneurysm Rupture.34788704 · Stoecker, Jordan B, Eddinger, Kevin C, Pouch, Alison M et al.2022 · 6 citationsAnnals of vascular surgery. 2022;82:240-248
Fully Automated Placental Volume Quantification From 3D Ultrasound for Prediction of Small-for-Gestational-Age Infants.34553780 · Schwartz, Nadav, Oguz, Ipek, Wang, Jiancong et al.2022 · 11 citationsJournal of ultrasound in medicine : official journal of the American Institute of Ultrasound in Medicine. 2022;41(6):1509-1524
Pre-surgical Prediction of Ischemic Mitral Regurgitation Recurrence Using In Vivo Mitral Valve Leaflet Strains.33837494 · Narang, Harshita, Rego, Bruno V, Khalighi, Amir H et al.2022 · 27 citationsAnnals of biomedical engineering. 2021;49(12):3711-3723
Dynamic Annular Modeling of the Unrepaired Complete Atrioventricular Canal Annulus.33359720 · Nam, Hannah H, Dinh, Patrick V, Lasso, Andras et al.2022 · 9 citationsThe Annals of thoracic surgery. 2022;113(2):654-662
Multimodal image analysis and subvalvular dynamics in ischemic mitral regurgitation.36003177 · Aly, Ahmed H, Saito, Yoshiaki, Bouma, Wobbe et al.2022 · 3 citationsJTCVS open. 2021;5:48-60
Dynamic Volumetric Assessment of the Aortic Root: The Influence of Bicuspid Aortic Valve Competence.32987018 · Pouch, Alison M, Patel, Prakash A, Desai, Nimesh D et al.2021 · 6 citationsThe Annals of thoracic surgery. 2021;112(4):1317-1324
In Vivo Image-Based 4D Modeling of Competent and Regurgitant Mitral Valve Dynamics.33776070 · Aly, A H, Aly, A H, Lai, E K et al.2026 · 6 citationsExperimental mechanics. 2021;61(1):159-169
Intraoperative post-annuloplasty three-dimensional valve analysis does not predict recurrent ischemic mitral regurgitation.32616001 · Meijerink, Frank, Wijdh-den Hamer, Inez J, Bouma, Wobbe et al.2020 · 5 citationsJournal of cardiothoracic surgery. 2020;15(1):161
Minimally interactive placenta segmentation from three-dimensional ultrasound images.32118089 · Oguz, Ipek, Yushkevich, Natalie, Pouch, Alison et al.2021 · 13 citationsJournal of medical imaging (Bellingham, Wash.). 2020;7(1):014004
Quantitative three-dimensional echocardiographic analysis of the bicuspid aortic valve and aortic root: A single modality approach.31794089 · Levack, Melissa M, Mecozzi, Gianclaudio, Jainandunsing, Jayant S et al.2020 · 0 citationsJournal of cardiac surgery. 2020;35(2):375-382
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