CS
Casper Kaae Sønderby
cs.LGstat.MLbioinformaticscs.CVDeep LearningGene Expression ProfilingMachine Learningphysics.ao-phProtein TransportSoftware
On Valency
published · living versionsW_8dhkmaf9·v1 · currentpublished
MetNet: A Neural Weather Model for Precipitation Forecasting
with Lasse Espeholt, Jonathan Heek, Mostafa Dehghani, Avital Oliver +4
1 version
Preprints & journals
21 papers in the corpus · 2013–2022Deep learning for twelve hour precipitation forecasts.36050311 · Espeholt, Lasse, Agrawal, Shreya, Sønderby, Casper et al.2022 · 255 citationsNature communications. 2022;13(1):5145
Skillful Twelve Hour Precipitation Forecasts using Large Context Neural Networks2111.07470v1 · Lasse Espeholt, Shreya Agrawal, Casper S\onderby et al.2021 · 40 citationsarXiv
Improved metagenome binning and assembly using deep variational autoencoders.33398153 · Nissen, Jakob Nybo, Johansen, Joachim, Allesøe, Rosa Lundbye et al.2021 · 655 citationsNature biotechnology. 2021;39(5):555-560
scVAE: variational auto-encoders for single-cell gene expression data.32415966 · Grønbech, Christopher Heje, Vording, Maximillian Fornitz, Timshel, Pascal N et al.2021 · 281 citationsBioinformatics (Oxford, England). 2020;36(16):4415-4422
IDF++: Analyzing and Improving Integer Discrete Flows for Lossless Compression2006.12459v2 · Rianne van den Berg, Alexey A. Gritsenko, Mostafa Dehghani et al.2020 · 40 citationsarXiv
MetNet: A Neural Weather Model for Precipitation Forecasting2003.12140v2 · Casper Kaae S\onderby, Lasse Espeholt, Jonathan Heek et al.2020 · 295 citationsarXivon Valency
NetSurfP-2.0: Improved prediction of protein structural features by integrated deep learning.30785653 · Klausen, Michael Schantz, Jespersen, Martin Closter, Nielsen, Henrik et al.2020 · 574 citationsProteins. 2019;87(6):520-527
SignalP 5.0 improves signal peptide predictions using deep neural networks.30778233 · Almagro Armenteros, José Juan, Tsirigos, Konstantinos D, Sønderby, Casper Kaae et al.2019 · 4,295 citationsNature biotechnology. 2019;37(4):420-423
DeepLoc: prediction of protein subcellular localization using deep learning.29028934 · Almagro Armenteros, Jose Juan, Sønderby, Casper Kaae, Sønderby, Søren Kaae et al.2019 · 101 citationsBioinformatics (Oxford, England). 2017;33(24):4049
An introduction to deep learning on biological sequence data: examples and solutions.28961695 · Jurtz, Vanessa Isabell, Johansen, Alexander Rosenberg, Nielsen, Morten et al.2018 · 157 citationsBioinformatics (Oxford, England). 2017;33(22):3685-3690
DeepLoc: prediction of protein subcellular localization using deep learning.29036616 · Almagro Armenteros, José Juan, Sønderby, Casper Kaae, Sønderby, Søren Kaae et al.2018 · 1,143 citationsBioinformatics (Oxford, England). 2017;33(21):3387-3395
Neural Machine Translation with Characters and Hierarchical Encoding1610.06550v1 · Alexander Rosenberg Johansen, Jonas Meinertz Hansen, Elias Khazen Obeid et al.2016 · 3 citationsarXiv
Amortised MAP Inference for Image Super-resolution1610.04490v3 · Casper Kaae S\onderby, Jose Caballero, Lucas Theis et al.2016 · 302 citationsarXiv
Auxiliary Deep Generative Models1602.05473v4 · Lars Maalœ, Casper Kaae S\onderby, S\oren Kaae S\onderby et al.2016 · 243 citationsarXiv
Ladder Variational Autoencoders1602.02282v3 · Casper Kaae S\onderby, Tapani Raiko, Lars Maalœ et al.2016 · 248 citationsarXiv
BloodSpot: a database of gene expression profiles and transcriptional programs for healthy and malignant haematopoiesis.26507857 · Bagger, Frederik Otzen, Sasivarevic, Damir, Sohi, Sina Hadi et al.2016 · 330 citationsNucleic acids research. 2016;44(D1):D917-24
Tumor suppressor ASXL1 is essential for the activation of INK4B expression in response to oncogene activity and anti-proliferative signals.26470845 · Wu, Xudong, Bekker-Jensen, Ida Holst, Christensen, Jesper et al.2016 · 49 citationsCell research. 2015;25(11):1205-18
Recurrent Spatial Transformer Networks1509.05329v1 · S\oren Kaae S\onderby, Casper Kaae S\onderby, Lars Maalœ et al.2015 · 38 citationsarXiv
Diffusion weighted imaging with circularly polarized oscillating gradients.24639209 · Lundell, Henrik, Sønderby, Casper Kaae, Dyrby, Tim B2015 · 40 citationsMagnetic resonance in medicine. 2015;73(3):1171-6
Apparent exchange rate imaging in anisotropic systems.24123426 · Sønderby, Casper K, Lundell, Henrik M, Søgaard, Lise V et al.2015 · 33 citationsMagnetic resonance in medicine. 2014;72(3):756-62
Orientationally invariant metrics of apparent compartment eccentricity from double pulsed field gradient diffusion experiments.24038641 · Jespersen, Sune Nørhøj, Lundell, Henrik, Sønderby, Casper Kaae et al.2014 · 197 citationsNMR in biomedicine. 2013;26(12):1647-62
Career total: 30 works. 21 are in this corpus.
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