MB
Michael J. Berry
Models, Neurologicalneuroscienceq-bio.NCcond-mat.stat-mechcond-mat.dis-nnretinaadaptationinformation theoryLaser CoagulationLaser Therapy
On Valency
published · living versionsW_6uv2jkb5·v1 · currentpublished
Thermodynamics for a network of neurons: Signatures of criticality
with Gasper Tkacik, Thierry Mora, Olivier Marre, Dario Amodei +1
1 version
Preprints & journals
65 papers in the corpus · 1996–2026A Theory of Thalamocortical Loops in Evidence Accumulation and Decision-Making10.64898/2025.12.23.696263v1 · Berry, M. J.2025 · 1 citationbioRxiv
Thermodynamics for a network of neurons: Signatures of criticality1407.5946v1 · Gasper Tkacik, Thierry Mora, Olivier Marre et al.2014 · 23 citationsProceedings of the National Academy of Sciences (USA)112, 11508-11513 (2015)on Valency
Stimulus-invariant aspects of the retinal code drive discriminability of natural scenes.39700141 · Hoshal, Benjamin D, Holmes, Caroline M, Bojanek, Kyle et al.2024 · 11 citationsProceedings of the National Academy of Sciences of the United States of America. 2024;121(52):e2313676121
Learning low-dimensional generalizable natural features from retina using a U-net.37362058 · Wang, Siwei, Hoshal, Benjamin, de Laittre, Elizabeth A et al.2024 · 3 citationsAdvances in neural information processing systems. 2022;35:11355-11368
Stimulus invariant aspects of the retinal code drive discriminability of natural scenes10.1101/2023.08.08.552526v2 · Hoshal, B., Holmes, C. M., Bojanek, K. et al.2023 · 11 citationsbioRxiv
Alpha herpesvirus exocytosis from neuron cell bodies uses constitutive secretory mechanisms, and egress and spread from axons is independent of neuronal firing activity.38578790 · Ambrosini, Anthony E, Borg, Kayla M, Deshmukh, Nikhil et al.2024 · 5 citationsPLoS pathogens. 2024;20(4):e1012139
Clustering of Neural Activity: A Design Principle for Population Codes.32231528 · Berry, Michael J, Tkačik, Gašper2024 · 15 citationsFrontiers in computational neuroscience. 2020;14:20
Learning low-dimensional generalizable naturalfeatures from retina using a U-net10.1101/2022.11.02.514893v1 · Wang, S., Hoshal, B., de Laittre, E. et al.2022 · 2 citationsbioRxiv
Novel stimuli evoke excess activity in the mouse primary visual cortex.35101916 · Homann, Jan, Koay, Sue Ann, Chen, Kevin S et al.2022 · 59 citationsProceedings of the National Academy of Sciences of the United States of America. 2022;119(5)
Passive Exposure Sparsifies Neural Activity in the Primary Visual Cortex10.1101/2021.11.18.469160v1 · Homann, J., Kim, H., Tank, D. W. et al.2021 · 4 citationsbioRxiv
The generation of cortical novelty responses through inhibitory plasticity.34647889 · Schulz, Auguste, Miehl, Christoph, Berry, Michael J et al.2021 · 78 citationseLife. 2021;10
The generation of cortical novelty responses through inhibitory plasticity10.1101/2020.11.30.403840v1 · Schulz, A., Miehl, C., Berry, M. J. et al.2020 · 78 citationsbioRxiv
Salamander retinal ganglion cell responses to rich stimuli10.1101/2020.01.14.906149v1 · Sadeghi, K., Berry, M. J.2020 · 1 citationbioRxiv
Alpha herpesvirus egress and spread from neurons uses constitutive secretory mechanisms independent of neuronal firing activity10.1101/729830v1 · Ambrosini, A. E., Deshmukh, N., Berry, M. J. et al.2019 · 1 citationbioRxiv
A Long Timescale Stimulus History Effect in the Primary Visual Cortex10.1101/585539v1 · Kim, H., Homann, J., Tank, D. W. et al.2019 · 12 citationsbioRxiv
Nonlinear transfer and temporal gain control in ON bipolar cells10.1101/514364v1 · Deshmukh, N., Berry, M. J.2019 · 2 citationsbioRxiv
Noise-Robust Modes of the Retinal Population Code Have the Geometry of "Ridges" and Correspond to Neuronal Communities.28957022 · Loback, Adrianna, Prentice, Jason, Ioffe, Mark et al.2019 · 12 citationsNeural computation. 2017;29(12):3119-3180
A Biologically Plausible Mechanism to Learn Clusters of Neural Activity10.1101/389155v1 · Loback, A. R., Berry, M. J.2018 · 1 citationbioRxiv
The Structured `Low Temperature' Phase of the Retinal Population Code1608.05751v1 · Mark L. Ioffe, Michael J. Berry II2016 · 14 citationsarXiv
Predictive Coding of Novel versus Familiar Stimuli in the Primary Visual Cortex10.1101/197608v1 · Homann, J., Koay, S. A., Glidden, A. M. et al.2017 · 48 citationsbioRxiv
Error-Robust Modes of the Retinal Population Code.27855154 · Prentice, Jason S, Marre, Olivier, Ioffe, Mark L et al.2017 · 36 citationsPLoS computational biology. 2016;12(11):e1005148
Network information and connected correlationsphysics/0307072v1 · Elad Schneidman, Susanne Still, Michael J. Berry II et al.2003 · 329 citationsPhys. Rev. Lett. 91, 238701:1-4 (2003)
High-fidelity coding with correlated neurons.25412463 · da Silveira, Rava Azeredo, Berry, Michael J2015 · 48 citationsPLoS computational biology. 2014;10(11):e1003970
Predictive information in a sensory population.26038544 · Palmer, Stephanie E, Marre, Olivier, Berry, Michael J et al.2015 · 301 citationsProceedings of the National Academy of Sciences of the United States of America. 2015;112(22):6908-13
The simplest maximum entropy model for collective behavior in a neural network1207.6319v1 · Gasper Tkacik, Olivier Marre, Thierry Mora et al.2012 · 148 citationsarXiv
The neural circuit mechanisms underlying the retinal response to motion reversal.25411485 · Chen, Eric Y, Chou, Janice, Park, Jeongsook et al.2015 · 39 citationsThe Journal of neuroscience : the official journal of the Society for Neuroscience. 2014;34(47):15557-75
Spike triggered covariance in strongly correlated gaussian stimuli.24039563 · Aljadeff, Johnatan, Segev, Ronen, Berry, Michael J et al.2014 · 9 citationsPLoS computational biology. 2013;9(9):e1003206
Searching for collective behavior in a network of real neurons1306.3061v1 · Gasper Tkacik, Olivier Marre, Dario Amodei et al.2013 · 278 citationsPLOS Comput Biol 10 (2014): e1003408on Valency
Identifying functional bases for multidimensional neural computations.23607565 · Kaardal, Joel, Fitzgerald, Jeffrey D, Berry, Michael J et al.2014 · 32 citationsNeural computation. 2013;25(7):1870-90
High-Fidelity Coding with Correlated Neurons1307.3591v3 · Rava Azeredo da Silveira, Michael J. Berry II2013 · 48 citationsarXiv
Low error discrimination using a correlated population code.22539825 · Schwartz, Greg, Macke, Jakob, Amodei, Dario et al.2013 · 27 citationsJournal of neurophysiology. 2012;108(4):1069-88
Synergy from silence in a combinatorial neural code.22049416 · Schneidman, Elad, Puchalla, Jason L, Segev, Ronen et al.2011 · 89 citationsThe Journal of neuroscience : the official journal of the Society for Neuroscience. 2011;31(44):15732-41
Fine spatial information represented in a population of retinal ganglion cells.21307251 · Soo, Frederick S, Schwartz, Gregory W, Sadeghi, Kolia et al.2011 · 46 citationsThe Journal of neuroscience : the official journal of the Society for Neuroscience. 2011;31(6):2145-55
Spin glass models for a network of real neurons0912.5409v1 · Gasper Tkacik, Elad Schneidman, Michael J. Berry II et al.2009 · 78 citationsarXivon Valency
Weak pairwise correlations imply strongly correlated network states in a neural populationq-bio/0512013v1 · Elad Schneidman, Michael J. Berry II, Ronen Segev et al.2005 · 1,899 citationsarXiv
An oscillatory circuit underlying the detection of disruptions in temporally-periodic patterns.19568983 · Gao, Juan, Schwartz, Greg, Berry, Michael J et al.2009 · 15 citationsNetwork (Bristol, England). 2009;20(2):106-35
Sophisticated temporal pattern recognition in retinal ganglion cells.18272878 · Schwartz, Greg, Berry, Michael J2008 · 64 citationsJournal of neurophysiology. 2008;99(4):1787-98
Role of eye movements in the retinal code for a size discrimination task.17625063 · Segev, Ronen, Schneidman, Elad, Goodhouse, Joe et al.2008 · 50 citationsJournal of neurophysiology. 2007;98(3):1380-91
Synchronized firing among retinal ganglion cells signals motion reversal.17880898 · Schwartz, Greg, Taylor, Sam, Fisher, Clark et al.2007 · 124 citationsNeuron. 2007;55(6):958-69
Detection and prediction of periodic patterns by the retina.17450138 · Schwartz, Greg, Harris, Rob, Shrom, David et al.2007 · 123 citationsNature neuroscience. 2007;10(5):552-4
Selectivity for multiple stimulus features in retinal ganglion cells.16914609 · Fairhall, Adrienne L, Burlingame, C Andrew, Narasimhan, Ramesh et al.2006 · 158 citationsJournal of neurophysiology. 2006;96(5):2724-38
Functional organization of ganglion cells in the salamander retina.16306176 · Segev, Ronen, Puchalla, Jason, Berry, Michael J2006 · 115 citationsJournal of neurophysiology. 2006;95(4):2277-92
How much the eye tells the brain.16860742 · Koch, Kristin, McLean, Judith, Segev, Ronen et al.2006 · 258 citationsCurrent biology : CB. 2006;16(14):1428-34
Weak pairwise correlations imply strongly correlated network states in a neural population.16625187 · Schneidman, Elad, Berry, Michael J, Segev, Ronen et al.2006 · 1,875 citationsNature. 2006;440(7087):1007-12
Redundancy in the population code of the retina.15882648 · Puchalla, Jason L, Schneidman, Elad, Harris, Robert A et al.2005 · 237 citationsNeuron. 2005;46(3):493-504
Efficiency of information transmission by retinal ganglion cells.15341738 · Koch, Kristin, McLean, Judith, Berry, Michael et al.2005 · 107 citationsCurrent biology : CB. 2004;14(17):1523-30
Recording spikes from a large fraction of the ganglion cells in a retinal patch.15452581 · Segev, Ronen, Goodhouse, Joe, Puchalla, Jason et al.2004 · 227 citationsNature neuroscience. 2004;7(10):1154-61
Network information and connected correlations.14683220 · Schneidman, Elad, Still, Susanne, Berry, Michael J et al.2004 · 325 citationsPhysical review letters. 2003;91(23):238701
Synergy, redundancy, and independence in population codes.14684857 · Schneidman, Elad, Bialek, William, Berry, Michael J2004 · 526 citationsThe Journal of neuroscience : the official journal of the Society for Neuroscience. 2003;23(37):11539-53
A test of metabolically efficient coding in the retina.12463343 · Balasubramanian, Vijay, Berry, Michael J2002 · 59 citationsNetwork (Bristol, England). 2002;13(4):531-52
Career total: 127 works. 65 are in this corpus.Showing the 50 most recent.
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