AA
Alexandre Antonelli
BiodiversityPhylogenyBiological Evolutionevolutionary biologyecologyPlantsbiogeographyEcosystemExtinction, BiologicalFossils
On Valency
published · living versionsW_xbcpb9k9·v1 · currentpublished
3Dtrees.earth: community research infrastructure for tree and forest analysis using close-range LiDAR data
with Janusch Vajna-Jehle, Kilian Gerberding, Daniel Lusk, Teja Kattenborn +273
1 version
Preprints & journals
224 papers in the corpus · 1970–2026Challenges for reproducibility in species delimitation.42730817 · Albert, James S, Torgersen, Kevin T, Waltz, Brandon T et al.2026 · 0 citationsSystematic biology. 2026
Synergies and trade-offs for reaching global biodiversity and climate commitments.42816464 · Huang, Zhongde, Fang, Zhou, Antonelli, Alexandre et al.2026 · 0 citationsNature communications. 2026;17(1)
The digital biodiversity revolution.42297009 · Antonelli, Alexandre, Davis, Charles, Larridon, Isabel et al.2026 · 2 citationsThe New phytologist. 2026;251(2):595-601
Genomic and ecological drivers of parallel arid adaptation in tree grapes (Vitaceae).42252290 · Yu, Jinren, Zhou, Ju, Luo, Shanshan et al.2026 · 0 citationsNature communications. 2026;17(1)
Global dataset of soil eukaryotic communities created with a uniform protocol and long read sequencing.42086586 · Mikryukov, Vladimir, Dulya, Olesya, Abarenkov, Kessy et al.2026 · 0 citationsScientific data. 2026;13(1)
Dissetangling the Vine: Phylogenomics and Historical Biogeography of Vanilla (Orchidaceae)10.64898/2026.04.07.716943v1 · Damian-Parizaca, A., Perez-Escobar, O., Karremans, A. et al.2026 · 1 citationbioRxiv
A comprehensive dated phylogeny of China's vascular plants reveals a hidden global biodiversity hotspot.41917529 · Feng, Ya-Lei, Hu, Hai-Hua, Liu, Bing et al.2026 · 12 citationsNature ecology & evolution. 2026;10(4):794-806
DNA-based identification of plants and the genomic nature of plant species differences.41882066 · Huang, Wu, Li, De-Zhu, Antonelli, Alexandre et al.2026 · 1 citationCommunications biology. 2026;9(1)
Molecular evidence reveals unsustainable harvest of wild orchids.41887209 · Veltman, Margaretha A, Anthoons, Bastien, Schrøder-Nielsen, Audun et al.2026 · 1 citationCurrent biology : CB. 2026;36(7):1842-1856.e5
Beyond scents: calling on the fragrance industry to champion plant diversity.42344938 · de Paula, Luiza F A, Smith, Rhian J, Handley, Vanessa et al.2026 · 0 citationsBioscience. 2026;76(6):513-524
Decoupled diversity and disparity after faunistic turnover in caviomorph rodents.41818809 · Carrillo, Juan D, Torres Jimenez, Maria Fernanda, Urrea-Barreto, Francisco J et al.2026 · 0 citationsProceedings. Biological sciences. 2026;293(2066)
WABAD: A world annotated bird acoustic dataset for passive acoustic monitoring.41652929 · Pérez-Granados, Cristian, Morant, Jon, Darras, Kevin F A et al.2026 · 12 citationsEcology. 2026;107(2):e70317
Simultaneous Automated Insect Monitoring Across a Remote Tropical Elevation Gradient With Mothbox.42233887 · Szczygieł, Hubert A, Quitmeyer, Andrew, Johns, Brianna et al.2026 · 1 citationIntegrative and comparative biology. 2026;66
Plastid and nuclear phylogenomics of Cyphostemma (Vitaceae) provide new insights into genome size evolution across sub-Saharan Africa.41508287 · Ranaivoson, Rindra M, Rabarijaona, Romer N, Yu, Jin-Ren et al.2026 · 3 citationsJournal of integrative plant biology. 2026;68(5):1399-1420
Environmental Variation Promotes Convergent Evolution and Rapid Diversification of Wing Shape and Color in Skipper Butterflies10.64898/2025.12.27.696669v1 · Matos-Maravi, P., Linke, D., Ribeiro, P. et al.2025 · 1 citationbioRxiv
A new species of Purpureocillium (Ophiocordycipitaceae) fungus parasitizing trapdoor spiders in Brazil's Atlantic Forest and its associated microbiome revealed through in situ "taxogenomics".41424704 · Araújo, João P M, Przelomska, Natalia A S, Smith, Rhian J et al.2025 · 2 citationsIMA fungus. 2025;16:e168534
Setting priorities for the acquisition of primary plant occurrence data10.1101/2025.11.11.683036v2 · Bystriakova, N., De Melo, P. A. H., Antonelli, A. et al.2025 · 1 citationbioRxiv
Equipping the next generation of plant taxonomists: Insights and recommendations.41198420 · Simões, Ana Rita G, Leliaert, Frederik, Bramley, Gemma L C et al.2026 · 7 citationsTrends in plant science. 2026;31(5):677-691
Harnessing the benefits of herbarium specimen digitisation for inferring recent and ongoing plant extinctions.40963482 · Humphreys, Aelys M, Fisher, Diana O, Witts, Naomi A et al.2026 · 7 citationsThe New phytologist. 2026;251(2):677-688
Late 21st-Century Climate and Land Use Driven Loss of Plant Diversity in African Mountains.40977401 · Vidal Junior, João de Deus, Antonelli, Alexandre, Carbutt, Clinton et al.2025 · 5 citationsGlobal change biology. 2025;31(9):e70492
Human contributions to global soundscapes are less predictable than the acoustic rhythms of wildlife.40634696 · Somervuo, Panu, Roslin, Tomas, Fisher, Brian L et al.2025 · 9 citationsNature ecology & evolution. 2025;9(9):1585-1598
Predicting Ecosystem Resilience Using Multi-Agent Reinforcement Learning10.1101/2025.06.07.658424v1 · Strannegard, C., Palak, M., Emgsner, N. et al.2025 · 0 citationsbioRxiv
Sliding-window phylogenetic analyses uncover complex interplastomic recombination in the tropical Asian-American disjunct plant genus Hedyosmum (Chloranthaceae).40165720 · Li, Peng-Wei, Lu, Yong-Bin, Antonelli, Alexandre et al.2025 · 10 citationsThe New phytologist. 2025;246(6):2405-2415
Trade tariffs could worsen deforestation in South America.40263444 · Antonelli, Alexandre, Chater, Caspar, Strassburg, Bernardo et al.2025 · 3 citationsNature. 2025;640(8060):881
AI-based prediction of herbarium sequencing success across the plant tree of life10.1101/2025.02.03.636220v1 · Ranjbaran, Y., Maurin, O., Canadelli, E. et al.2025 · 1 citationbioRxiv
Using artificial intelligence to optimize ecological restoration for climate and biodiversity10.1101/2025.01.31.635975v4 · Silvestro, D., Goria, S., Rau, E.-P. et al.2025 · 5 citationsbioRxiv
A probabilistic approach to estimating timber harvest location.39835343 · Truszkowski, Jakub, Maor, Roi, Yousuf, Raquib Bin et al.2025 · 5 citationsEcological applications : a publication of the Ecological Society of America. 2025;35(1):e3077
How biodiversity credits could help to conserve and restore nature.39468324 · Antonelli, Alexandre, Rueda, Ximena, Calcagno, Robert et al.2026 · 36 citationsNature. 2024;634(8036):1045-1049
Guidelines for the effective and ethical sampling of herbaria.39333397 · Davis, Charles C, Sessa, Emily, Paton, Alan et al.2025 · 25 citationsNature ecology & evolution. 2025;9(2):196-203
Plant diversity darkspots for global collection priorities.39152543 · Ondo, Ian, Dhanjal-Adams, Kiran L, Pironon, Samuel et al.2024 · 122 citationsThe New phytologist. 2024;244(2):719-733
Safeguard stewards of biodiversity knowledge-Response.39088623 · Pironon, S, Ondo, I, Diazgranados, M et al.2024 · 2 citationsScience (New York, N.Y.). 2024;385(6708):506
Reliable biogeography requires fossils: insights from a new species-level phylogeny of extinct and living carnivores.39106959 · Faurby, Søren, Silvestro, Daniele, Werdelin, Lars et al.2024 · 27 citationsProceedings. Biological sciences. 2024;291(2028):20240473
Isolated, neglected, and likely threatened: a new species of Magoniella (Polygonaceae) from the seasonally dry tropical forests of Northern Colombia and Venezuela revealed from nuclear, plastid, and morphological data.39109066 · Aguilar-Cano, José, Pérez-Escobar, Oscar Alejandro, Pizano, Camila et al.2024 · 0 citationsFrontiers in plant science. 2024;15:1253260
Morphometrics and Phylogenomics of Coca (Erythroxylum spp.) Illuminate Its Reticulate Evolution, With Implications for Taxonomy.38982580 · Przelomska, Natalia A S, Diaz, Rudy A, Ávila, Fabio Andrés et al.2024 · 4 citationsMolecular biology and evolution. 2024;41(7)
Phylogenomics and the rise of the angiosperms.38658746 · Zuntini, Alexandre R, Carruthers, Tom, Maurin, Olivier et al.2024 · 433 citationsNature. 2024;629(8013):843-850
Two Major Extinction Events in the Evolutionary History of Turtles: One Caused by an Asteroid, the Other by Hominins.38781523 · Pereira, Anieli G, Antonelli, Alexandre, Silvestro, Daniele et al.2024 · 10 citationsThe American naturalist. 2024;203(6):644-654
Worldwide Soundscapes: a synthesis of passive acoustic monitoring across realms10.1101/2024.04.10.588860v4 · Darras, K. F., Rountree, R., Van Wilgenburg, S. et al.2024 · 87 citationsbioRxiv
Spatial heterogeneity of neo- and paleo-endemism for plants in Madagascar.38460512 · Omollo, Wyckliffe Omondi, Rabarijaona, Romer Narindra, Ranaivoson, Rindra Manasoa et al.2024 · 25 citationsCurrent biology : CB. 2024;34(6):1271-1283.e4
A framework for tracing timber following the Ukraine invasion.38467801 · Mortier, Thomas, Truszkowski, Jakub, Norman, Marigold et al.2024 · 19 citationsNature plants. 2024;10(3):390-401
The origin and speciation of orchids.38382573 · Pérez-Escobar, Oscar A, Bogarín, Diego, Przelomska, Natalia A S et al.2024 · 132 citationsThe New phytologist. 2024;242(2):700-716
The global distribution of plants used by humans.38236975 · Pironon, S, Ondo, I, Diazgranados, M et al.2024 · 127 citationsScience (New York, N.Y.). 2024;383(6680):293-297
Undiscovered bird extinctions obscure the true magnitude of human-driven extinction waves.38114469 · Cooke, Rob, Sayol, Ferran, Andermann, Tobias et al.2023 · 61 citationsNature communications. 2023;14(1):8116
Physical infrastructure and global capacity are both needed to fight biodiversity loss.38040836 · Kersey, Paul J, Antonelli, Alexandre2023 · 3 citationsNature plants. 2023;9(12):1940
Connecting the multiple dimensions of global soil fungal diversity.38019923 · Mikryukov, Vladimir, Dulya, Olesya, Zizka, Alexander et al.2023 · 94 citationsScience advances. 2023;9(48):eadj8016
Online tree expansion could help solve the problem of scalability in Bayesian phylogenetics.37498209 · Truszkowski, Jakub, Perrigo, Allison, Broman, David et al.2023 · 6 citationsSystematic biology. 2023;72(5):1199-1206
Why plant diversity and distribution matter.37813121 · Antonelli, Alexandre, Govaerts, Rafaël, Nic Lughadha, Eimear et al.2023 · 23 citationsThe New phytologist. 2023;240(4):1331-1336
Spiny but photogenic: Amateur sightings complement herbarium specimens to reveal the bioregions of cacti.37661935 · Calvente, Alice, da Silva, Ana Paula Alves, Edler, Daniel et al.2023 · 12 citationsAmerican journal of botany. 2023;110(10):e16235
People-inspired names remain valuable.37337005 · Antonelli, Alexandre, Farooq, Harith, Colli-Silva, Matheus et al.2023 · 20 citationsNature ecology & evolution. 2023;7(8):1161-1162
Global hotspots of plant phylogenetic diversity.37496281 · Tietje, Melanie, Antonelli, Alexandre, Forest, Félix et al.2023 · 76 citationsThe New phytologist. 2023;240(4):1636-1646
Rediscovery of the lost skink Proscelotes aenea and implications for conservation.37438413 · Puruleia, Ali, Nanvonamuquitxo, Cristóvão, Ernesto, Milagre et al.2023 · 3 citationsScientific reports. 2023;13(1):11261
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