LH
Li Han
Recombination, GeneticAllelesMolecular Dynamics Simulationclass switch recombinationcs.GTdimensionality reductionDNA End-Joining RepairDNA MethylationDNA repairGenomic Imprinting
On Valency
published · living versionsW_8ppbgcg5·v1 · currentpublished
Sampling and Representation Complexity of Revenue Maximization
with Shaddin Dughmi, Noam Nisan
1 version
Preprints & journals
36 papers in the corpus · 2001–2025Study on the Competitive Binding of Food Ingredients and Gambogic Acid to Plasma Proteins: Insights From Spectroscopy, Docking, and Cell Assay.40785437 · Xu, Liang, Zhou, Xin-Yi, Li, Chun-Yu et al.2025 · 1 citationLuminescence : the journal of biological and chemical luminescence. 2025;40(8):e70264
Herpes Simplex Infection in Treatment-Refractory Plasma Cell Vulvovaginitis.40392974 · Lu, SiWen, Ding, Gaozhong, Cheng, YuXin et al.2025 · 0 citationsAmerican journal of therapeutics. 2025;32(6):e571-e572
Lig3-dependent rescue of mouse viability and DNA double-strand break repair by catalytically inactive Lig4.39673806 · Medina-Suárez, David, Han, Li, O'Reilly, Sandra et al.2025 · 5 citationsNucleic acids research. 2025;53(2)
Revealing Free Energy Landscape From MD Data via Conditional Angle Partition Tree.35503836 · Jiang, Hangjin, Li, Han, Wong, Wing Hung et al.2023 · 4 citationsIEEE/ACM transactions on computational biology and bioinformatics. 2023;20(2):1384-1394
Dynamics and Allosteric Information Pathways of Unphosphorylated c-Cbl.36442893 · Yang, Tianyi, Han, Li, Huo, Shuanghong2022 · 4 citationsJournal of chemical information and modeling. 2022;62(23):6148-6159
Immunoglobulin Class Switch Recombination Is Initiated by Rare Cytosine Deamination Events at Switch Regions.32513818 · Kim, Ahrom, Han, Li, Yu, Kefei2020 · 5 citationsMolecular and cellular biology. 2020;40(16)
Approximating dynamic proximity with a hybrid geometry energy-based kernel for diffusion maps.31521094 · Tan, Qingzhe, Duan, Mojie, Li, Minghai et al.2019 · 2 citationsThe Journal of chemical physics. 2019;151(10):105101
EHMT2 and SETDB1 protect the maternal pronucleus from 5mC oxidation.31088968 · Zeng, Tie-Bo, Han, Li, Pierce, Nicholas et al.2020 · 37 citationsProceedings of the National Academy of Sciences of the United States of America. 2019;116(22):10834-10841
Observations on AMBER Force Field Performance under the Conditions of Low pH and High Salt Concentrations.28962533 · Liu, Hanzhong, Tan, Qingzhe, Han, Li et al.2018 · 5 citationsThe journal of physical chemistry. B. 2017;121(42):9838-9847
Class-Switch Recombination in the Absence of the IgH 3' Regulatory Region.27559052 · Kim, Ahrom, Han, Li, Santiago, Gabriel E et al.2017 · 21 citationsJournal of immunology (Baltimore, Md. : 1950). 2016;197(7):2930-5
Redundant function of DNA ligase 1 and 3 in alternative end-joining during immunoglobulin class switch recombination.26787901 · Masani, Shahnaz, Han, Li, Meek, Katheryn et al.2016 · 67 citationsProceedings of the National Academy of Sciences of the United States of America. 2016;113(5):1261-6
Mixture Selection, Mechanism Design, and Signaling1508.03679v1 · Yu Cheng, Ho Yee Cheung, Shaddin Dughmi et al.2015 · 42 citationsarXiv
[Sequence Analysis of A Novel HLA-B*13:68 Allele].26314461 · Han, Bin, Han, Li, Feng, Zhi-Hui et al.2015 · 0 citationsZhongguo shi yan xue ye xue za zhi. 2015;23(4):1144-6
Effect of CpG dinucleotides within IgH switch region repeats on immunoglobulin class switch recombination.25899867 · Zhang, Zheng Z, Hsieh, Chih-Lin, Okitsu, Cindy Yen et al.2015 · 5 citationsMolecular immunology. 2015;66(2):284-9
The strength of an Ig switch region is determined by its ability to drive R loop formation and its number of WGCW sites.25017067 · Zhang, Zheng Z, Pannunzio, Nicholas R, Han, Li et al.2015 · 41 citationsCell reports. 2014;8(2):557-69
Euclidean sections of protein conformation space and their implications in dimensionality reduction.24913095 · Duan, Mojie, Li, Minghai, Han, Li et al.2015 · 7 citationsProteins. 2014;82(10):2585-96
DNA ligase I is not essential for mammalian cell viability.24726358 · Han, Li, Masani, Shahnaz, Hsieh, Chih-Lin et al.2014 · 32 citationsCell reports. 2014;7(2):316-320
Sampling and Representation Complexity of Revenue Maximization1402.4535v2 · Shaddin Dughmi, Li Han, Noam Nisan2014 · 50 citationsarXivon Valency
Graph representation of protein free energy landscape.24320303 · Li, Minghai, Duan, Mojie, Fan, Jue et al.2014 · 12 citationsThe Journal of chemical physics. 2013;139(18):185101
Evaluation of Dimensionality-reduction Methods from Peptide Folding-unfolding Simulations.23772182 · Duan, Mojie, Fan, Jue, Li, Minghai et al.2021 · 32 citationsJournal of chemical theory and computation. 2013;9(5):2490-2497
Apurinic/apyrimidinic endonuclease 1 is the essential nuclease during immunoglobulin class switch recombination.23382073 · Masani, Shahnaz, Han, Li, Yu, Kefei2013 · 109 citationsMolecular and cellular biology. 2013;33(7):1468-73
X-ray repair cross-complementing protein 1 (XRCC1) deficiency enhances class switch recombination and is permissive for alternative end joining.22392994 · Han, Li, Mao, Weifeng, Yu, Kefei2012 · 37 citationsProceedings of the National Academy of Sciences of the United States of America. 2012;109(12):4604-8
Overlapping activation-induced cytidine deaminase hotspot motifs in Ig class-switch recombination.21709240 · Han, Li, Masani, Shahnaz, Yu, Kefei2011 · 87 citationsProceedings of the National Academy of Sciences of the United States of America. 2011;108(28):11584-9
Observation of two families of folding pathways of BBL.21575580 · Fan, Jue, Duan, Mojie, Li, Da-Wei et al.2011 · 9 citationsBiophysical journal. 2011;100(10):2457-65
Cutting edge: CTNNBL1 is dispensable for Ig class switch recombination.20585033 · Han, Li, Masani, Shahnaz, Yu, Kefei2010 · 31 citationsJournal of immunology (Baltimore, Md. : 1950). 2010;185(3):1379-81
Allele-specific H3K79 Di- versus trimethylation distinguishes opposite parental alleles at imprinted regions.20351169 · Singh, Purnima, Han, Li, Rivas, Guillermo E et al.2010 · 28 citationsMolecular and cellular biology. 2010;30(11):2693-707
Postnatal survival of mice with maternal duplication of distal chromosome 7 induced by a Igf2/H19 imprinting control region lacking insulator function.20062522 · Han, Li, Szabó, Piroska E, Mann, Jeffrey R2010 · 15 citationsPLoS genetics. 2010;6(1):e1000803
Meiotic maturation failure induced by DICER1 deficiency is derived from primary oocyte ooplasm.19129368 · Mattiske, Deidre M, Han, Li, Mann, Jeffrey R2012 · 34 citationsReproduction (Cambridge, England). 2009;137(4):625-32
Altered kinetics of nonhomologous end joining and class switch recombination in ligase IV-deficient B cells.19001141 · Han, Li, Yu, Kefei2008 · 119 citationsThe Journal of experimental medicine. 2008;205(12):2745-53
CTCF is the master organizer of domain-wide allele-specific chromatin at the H19/Igf2 imprinted region.18039862 · Han, Li, Lee, Dong-Hoon, Szabó, Piroska E2008 · 87 citationsMolecular and cellular biology. 2008;28(3):1124-35
Predicting the folding pathway of engrailed homeodomain with a probabilistic roadmap enhanced reaction-path algorithm.18024496 · Li, Da-Wei, Yang, Haijun, Han, Li et al.2008 · 11 citationsBiophysical journal. 2008;94(5):1622-9
Structural and pathway complexity of beta-strand reorganization within aggregates of human transthyretin(105-115) peptide.17432900 · Li, Da-Wei, Han, Li, Huo, Shuanghong2007 · 25 citationsThe journal of physical chemistry. B. 2007;111(19):5425-33
Temperature-Dependent Probabilistic Roadmap Algorithm for Calculating Variationally Optimized Conformational Transition Pathways.26627147 · Yang, Haijun, Wu, Hao, Li, Dawei et al.2015 · 16 citationsJournal of chemical theory and computation. 2007;3(1):17-25
Mutagenesis in mice of nuclear hormone receptor binding sites in the Igf2/H19 imprinting control region.16575186 · Szabó, P E, Han, L, Hyo-Jung, J et al.2006 · 17 citationsCytogenetic and genome research. 2006;113(1-4):238-46
Murine de novo methyltransferase Dnmt3a demonstrates strand asymmetry and site preference in the methylation of DNA in vitro.11784849 · Lin, Iping G, Han, Li, Taghva, Alexander et al.2002 · 112 citationsMolecular and cellular biology. 2002;22(3):704-23
Protein binding protects sites on stable episomes and in the chromosome from de novo methylation.11313467 · Han, L, Lin, I G, Hsieh, C L2001 · 61 citationsMolecular and cellular biology. 2001;21(10):3416-24
Career total: 62 works. 36 are in this corpus.
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