JF
Jeremy Freeman
neuroscienceModels, NeurologicalBrain MappingLocomotionmacaquesystems biologyvisual cortexAttentionbarrel cortexBehavior, Animal
On Valency
published · living versionsW_djneug2e·v1 · currentpublished
MLlib: Machine Learning in Apache Spark
with Xiangrui Meng, Joseph Bradley, Burak Yavuz, Evan Sparks +11
1 version
Preprints & journals
33 papers in the corpus · 2008–2021cellxgene: a performant, scalable exploration platform for high dimensional sparse matrices10.1101/2021.04.05.438318v1 · Megill, C., Martin, B., Weaver, C. et al.2021 · 214 citationsbioRxiv
Climate-driven risks to the climate mitigation potential of forests.32554569 · Anderegg, William R L, Trugman, Anna T, Badgley, Grayson et al.2020 · 861 citationsScience (New York, N.Y.). 2020;368(6497)
Recurrent interactions in local cortical circuits.32132709 · Peron, Simon, Pancholi, Ravi, Voelcker, Bettina et al.2020 · 144 citationsNature. 2020;579(7798):256-259
Recurrent interactions in local cortical circuits10.1101/822700v1 · Peron, S. P., Voelcker, B., Pancholi, R. et al.2019 · 144 citationsbioRxiv
Contextual modulation of sensitivity to naturalistic image structure in macaque V2.29641304 · Ziemba, Corey M, Freeman, Jeremy, Simoncelli, Eero P et al.2019 · 41 citationsJournal of neurophysiology. 2018;120(2):409-420
Brain-wide circuit interrogation at the cellular level guided by online analysis of neuronal function.30504888 · Vladimirov, Nikita, Wang, Chen, Höckendorf, Burkhard et al.2019 · 79 citationsNature methods. 2018;15(12):1117-1125
Community-based benchmarking improves spike rate inference from two-photon calcium imaging data.29782491 · Berens, Philipp, Freeman, Jeremy, Deneux, Thomas et al.2018 · 211 citationsPLoS computational biology. 2018;14(5):e1006157
Community-based benchmarking improves spike rate inference from two-photon calcium imaging data10.1101/177956v3 · Berens, P., Freeman, J., Deneux, T. et al.2017 · 211 citationsbioRxiv
Technologies for imaging neural activity in large volumes.27571194 · Ji, Na, Freeman, Jeremy, Smith, Spencer L2017 · 306 citationsNature neuroscience. 2016;19(9):1154-64
Improving data quality in neuronal population recordings.27571195 · Harris, Kenneth D, Quiroga, Rodrigo Quian, Freeman, Jeremy et al.2017 · 285 citationsNature neuroscience. 2016;19(9):1165-74
Neural coding in barrel cortex during whisker-guided locomotion.26701910 · Sofroniew, Nicholas James, Vlasov, Yurii A, Hires, Samuel Andrew et al.2017 · 137 citationseLife. 2015;4
Selectivity and tolerance for visual texture in macaque V2.27173899 · Ziemba, Corey M, Freeman, Jeremy, Movshon, J Anthony et al.2016 · 142 citationsProceedings of the National Academy of Sciences of the United States of America. 2016;113(22):E3140-9
Brain-wide mapping of neural activity controlling zebrafish exploratory locomotion.27003593 · Dunn, Timothy W, Mu, Yu, Narayan, Sujatha et al.2016 · 360 citationseLife. 2016;5:e12741
Mapping nonlinear receptive field structure in primate retina at single cone resolution.26517879 · Freeman, Jeremy, Field, Greg D, Li, Peter H et al.2016 · 112 citationseLife. 2015;4
Whole-central nervous system functional imaging in larval Drosophila.26263051 · Lemon, William C, Pulver, Stefan R, Höckendorf, Burkhard et al.2016 · 229 citationsNature communications. 2015;6:7924
Open source tools for large-scale neuroscience.25982977 · Freeman, Jeremy2016 · 70 citationsCurrent opinion in neurobiology. 2015;32:156-63
Imaging the neural basis of locomotion.26496599 · Branson, Kristin, Freeman, Jeremy2016 · 3 citationsCell. 2015;163(3):541-2
A Cellular Resolution Map of Barrel Cortex Activity during Tactile Behavior.25913859 · Peron, Simon P, Freeman, Jeremy, Iyer, Vijay et al.2015 · 410 citationsNeuron. 2015;86(3):783-99
MLlib: Machine Learning in Apache Spark1505.06807v1 · Xiangrui Meng, Joseph Bradley, Burak Yavuz et al.2015 · 957 citationsarXivon Valency
Representing "stuff" in visual cortex.25587133 · Ziemba, Corey M, Freeman, Jeremy2015 · 9 citationsProceedings of the National Academy of Sciences of the United States of America. 2015;112(4):942-3
Light-sheet imaging for systems neuroscience.25549267 · Keller, Philipp J, Ahrens, Misha B, Freeman, Jeremy2015 · 72 citationsNature methods. 2015;12(1):27-9
Motion direction biases and decoding in human visual cortex.25209297 · Wang, Helena X, Merriam, Elisha P, Freeman, Jeremy et al.2015 · 52 citationsThe Journal of neuroscience : the official journal of the Society for Neuroscience. 2014;34(37):12601-15
Light-sheet functional imaging in fictively behaving zebrafish.25068735 · Vladimirov, Nikita, Mu, Yu, Kawashima, Takashi et al.2014 · 373 citationsNature methods. 2014;11(9):883-4
Mapping brain activity at scale with cluster computing.25068736 · Freeman, Jeremy, Vladimirov, Nikita, Kawashima, Takashi et al.2014 · 332 citationsNature methods. 2014;11(9):941-50
Coarse-scale biases for spirals and orientation in human visual cortex.24336733 · Freeman, Jeremy, Heeger, David J, Merriam, Elisha P2014 · 94 citationsThe Journal of neuroscience : the official journal of the Society for Neuroscience. 2013;33(50):19695-703
A functional and perceptual signature of the second visual area in primates.23685719 · Freeman, Jeremy, Ziemba, Corey M, Heeger, David J et al.2013 · 389 citationsNature neuroscience. 2013;16(7):974-81
Substitution and pooling in crowding.22160819 · Freeman, Jeremy, Chakravarthi, Ramakrishna, Pelli, Denis G2012 · 92 citationsAttention, perception & psychophysics. 2012;74(2):379-96
Metamers of the ventral stream.21841776 · Freeman, Jeremy, Simoncelli, Eero P2011 · 717 citationsNature neuroscience. 2011;14(9):1195-201
Inter-area correlations in the ventral visual pathway reflect feature integration.21521832 · Freeman, Jeremy, Donner, Tobias H, Heeger, David J2011 · 66 citationsJournal of vision. 2011;11(4)
Orientation decoding depends on maps, not columns.21451017 · Freeman, Jeremy, Brouwer, Gijs Joost, Heeger, David J et al.2011 · 281 citationsThe Journal of neuroscience : the official journal of the Society for Neuroscience. 2011;31(13):4792-804
Unwrapping the ventral stream.21325501 · Freeman, Jeremy, Ziemba, Corey M2011 · 7 citationsThe Journal of neuroscience : the official journal of the Society for Neuroscience. 2011;31(7):2349-51
Crowding and eccentricity determine reading rate.18217835 · Pelli, Denis G, Tillman, Katharine A, Freeman, Jeremy et al.2008 · 384 citationsJournal of vision. 2007;7(2):20.1-36
An escape from crowding.18217837 · Freeman, Jeremy, Pelli, Denis G2008 · 54 citationsJournal of vision. 2007;7(2):22.1-14
Career total: 57 works. 33 are in this corpus.
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