MC
Michele Caselle
hep-lathep-thcond-mat.stat-mechcond-mathep-phq-bio.GNnucl-thq-bio.MNsystems biologyComputational Biology
On Valency
published · living versionsW_e3yyrcff·v1 · currentpublished
Confining strings in the reconfined phase of trace deformed three dimensional Yang-Mills theory
with Claudio Bonati, Alessio Negro, Dario Panfalone, Lorenzo Verzichelli
1 version
Preprints & journals
208 papers in the corpus · 1991–2026Pulling strings in real time: flux tube dynamics in (2+1)-d -Higgs Gauge Theories2608.27561v1 · Zeno Bacciconi, Martina Frau, Luca Tagliacozzo et al.2026 · 0 citationsarXiv
Alternative routes to universal diversity scaling in component systems: from proteomes to large language models2607.02221v1 · Andrea Mazzolini, Leonardo Agasso, Filippo Valle et al.2026 · 0 citationsarXiv
Confining Flux Tube in the Trace Deformed (2+1) Dimensional SU(2) Gauge Theory2606.20270v2 · Claudio Bonati, Michele Caselle, Alessio Negro et al.2026 · 0 citationsarXiv
Lattice Determination of the Baryon Junction Mass in Dimensions2603.08268v1 · Dario Panfalone, Michele Caselle, Nicodemo Magnoli et al.2026 · 0 citationsarXiv
Intrinsic Width of the flux tube in 2+1 dimensional Yang-Mills theories2603.05323v1 · Lorenzo Verzichelli, Michele Caselle, Elia Cellini et al.2026 · 8 citationsarXiv
Integration of single-cell multi-omic data with graph-based topic modelling10.64898/2026.02.25.707947v1 · Malagoli, G., Valle, F., Tirabassi, A. et al.2026 · 1 citationbioRxiv
Intrinsic Width of the Flux Tube as a tool to explore confining mechanisms in Lattice Gauge Theories2601.19520v2 · Michele Caselle, Elia Cellini, Alessandro Nada et al.2026 · 2 citationsarXiv
Ohno-miRNAs: miRNA pairs derived from whole-genome duplication.41336284 · Agasso, Leonardo, Molineris, Ivan, Caselle, Michele2025 · 0 citationsPLoS computational biology. 2025;21(12):e1013766
Casimir effect in critical O(N) models from nonequilibrium Monte Carlo simulations.41560220 · Bulgarelli, Andrea, Caselle, Michele, Nada, Alessandro et al.2026 · 1 citationPhysical review. E. 2025;112(6-1):064126
Studying Effective String Theory using deep generative models2508.20610v1 · Michele Caselle, Elia Cellini, Alessandro Nada2025 · 0 citationsarXiv
The intrinsic dimension of gene expression during cell differentiation.40889499 · Biondo, Marta, Cirone, Niccolò, Valle, Filippo et al.2025 · 6 citationsNucleic acids research. 2025;53(16)
The Mass of the Baryon Junction: a lattice computation in 2 +1 dimensions2508.00608v3 · Michele Caselle, Nicodemo Magnoli, Dario Panfalone et al.2025 · 4 citationsarXiv
Exploring the latent space of transcriptomic data with topic modeling.40264683 · Valle, Filippo, Caselle, Michele, Osella, Matteo2025 · 5 citationsNAR genomics and bioinformatics. 2025;7(2):lqaf049
The finite temperature ground state energy of the confining string in three-dimensional U(1) gauge theory2503.05354v1 · M. Caselle, A. Mariani2025 · 2 citationsJHEP 06 (2025) 010
Topic modeling analysis of the Allen Human Brain Atlas.40011617 · Pizzini, Letizia, Valle, Filippo, Osella, Matteo et al.2025 · 4 citationsScientific reports. 2025;15(1):6928
On the equation of state of U(1) lattice gauge theory in three dimensions2501.16185v2 · Michele Caselle, Alessandro Mariani, Marco Panero et al.2025 · 1 citationJHEP 03 (2025) 130
Effective string description of the reconfined phase in the trace deformed Yang-Mills theory in (2+1) dimensions2501.13684v1 · Caludio Bonati, Michele Caselle, Alessio Negro et al.2025 · 0 citationsarXiv
Ohno-miRNAs: intragenic miRNA pairs derived from whole-genome duplication10.1101/2025.01.16.632905v1 · Agasso, L., Molineris, I., Caselle, M.2025 · 0 citationsbioRxiv
Stochastic normalizing flows for Effective String Theory2412.19109v2 · Michele Caselle, Elia Cellini, Alessandro Nada2024 · 0 citationsarXiv
Effective String Theory of three-dimensional SU(N) gauge theories beyond the Nambu--Gotō approximation2412.14204v1 · Michele Caselle, Nicodemo Magnoli, Alessandro Nada et al.2024 · 0 citationsarXiv
An integrative network-based approach to identify driving gene communities in chronic obstructive pulmonary disease.39461973 · Marino, Roberta, El Aalamat, Yousef, Bol, Vanesa et al.2024 · 3 citationsNPJ systems biology and applications. 2024;10(1):125
Numerical determination of the width and shape of the effective string using Stochastic Normalizing Flows2409.15937v2 · Michele Caselle, Elia Cellini, Alessandro Nada2024 · 12 citationsJHEP 02 (2025) 090
Microsecond-Latency Feedback at a Particle Accelerator by Online Reinforcement Learning on Hardware2409.16177v1 · Luca Scomparin, Michele Caselle, Andrea Santamaria Garcia et al.2024 · 0 citationsarXiv
Confining strings in three-dimensional gauge theories beyond the Nambu--Gotō approximation2407.10678v1 · Michele Caselle, Nicodemo Magnoli, Alessandro Nada et al.2024 · 10 citationsarXiv
Ranking nodes in bipartite systems with a non-linear iterative map2406.17572v2 · Andrea Mazzolini, Michele Caselle, Matteo Osella2024 · 7 citationsarXiv
Identification of Interpretable Clusters and Associated Signatures in Breast Cancer Single-Cell Data: A Topic Modeling Approach.38611028 · Malagoli, Gabriele, Valle, Filippo, Barillot, Emmanuel et al.2024 · 5 citationsCancers. 2024;16(7)
Sampling Nambu-Goto theory using Normalizing Flows2309.14983v1 · Michele Caselle, Elia Cellini, Alessandro Nada2023 · 3 citationsarXiv
Out-of-equilibrium gene expression fluctuations in the presence of extrinsic noise.37489881 · Biondo, Marta, Singh, Abhyudai, Caselle, Michele et al.2023 · 9 citationsPhysical biology. 2023;20(5)
Sampling the lattice Nambu-Goto string using Continuous Normalizing Flows2307.01107v2 · Michele Caselle, Elia Cellini, Alessandro Nada2023 · 17 citationsJHEP 02 (2024) 048
Ising string beyond Nambu-Goto2306.06966v1 · Alberto Baffigo, Michele Caselle2023 · 8 citationsPhysical Review D 109, 034520 (2024)
Emergent statistical laws in single-cell transcriptomic data.37198814 · Lazzardi, Silvia, Valle, Filippo, Mazzolini, Andrea et al.2023 · 25 citationsPhysical review. E. 2023;107(4-1):044403
The effect of a linear feedback mechanism in a homeostasis model2303.03277v1 · Antonio Francesco Zirattu, Marta Biondo, Matteo Osella et al.2023 · 0 citationsarXiv
Opening the path to hard X-/soft gamma-ray focussing: the ASTENA-pathfinder mission2302.09272v1 · Enrico Virgilli, Lorenzo Amati, Natalia Auricchio et al.2023 · 0 citationsarXiv
Phase Transitions in Particle Physics -- Results and Perspectives from Lattice Quantum Chromo-Dynamics2301.04382v2 · Gert Aarts, Joerg Aichelin, Chris Allton et al.2023 · 2 citationsProg. Part. Nucl. Phys. 133 (2023) 104070
Stochastic normalizing flows for lattice field theory2210.03139v1 · Michele Caselle, Elia Cellini, Alessandro Nada et al.2022 · 9 citationsarXiv
On the behaviour of the interquark potential in the vicinity of the deconfinement transition2203.11504v1 · F. Caristo, M. Caselle, N. Magnoli et al.2022 · 0 citationsarXiv
A 3D transcriptomics atlas of the mouse nose sheds light on the anatomical logic of smell.35320714 · Ruiz Tejada Segura, Mayra L, Abou Moussa, Eman, Garabello, Elisa et al.2022 · 41 citationsCell reports. 2022;38(12):110547
Multiomics Topic Modeling for Breast Cancer Classification.35267458 · Valle, Filippo, Osella, Matteo, Caselle, Michele2026 · 13 citationsCancers. 2022;14(5)
Stochastic normalizing flows as non-equilibrium transformations2201.08862v3 · Michele Caselle, Elia Cellini, Alessandro Nada et al.2022 · 42 citationsJHEP 07 (2022) 015
The impact of whole genome duplications on the human gene regulatory networks.34871317 · Mottes, Francesco, Villa, Chiara, Osella, Matteo et al.2022 · 26 citationsPLoS computational biology. 2021;17(12):e1009638
Scaling region of the 3D Ising universality class in finite temperature QCD2111.13029v1 · Michele Caselle, Marianna Sorba2021 · 0 citationsarXiv
Subcellular Localization of Fad1p in Saccharomyces cerevisiae: A Choice at Post-Transcriptional Level?34575116 · Bruni, Francesco, Giancaspero, Teresa Anna, Oreb, Mislav et al.2024 · 4 citationsLife (Basel, Switzerland). 2021;11(9)
Fine corrections in the effective string describing SU(2) Yang-Mills theory in three dimensions2109.06212v2 · Fabrizio Caristo, Michele Caselle, Nicodemo Magnoli et al.2021 · 15 citationsJHEP 03 (2022) 115
The unreasonable effectiveness of effective string theory: the case of the 3d SU(2) Higgs model2106.08784v2 · Claudio Bonati, Michele Caselle, Silvia Morlacchi2021 · 12 citationsPhys. Rev. D 104, 054501 (2021)
Effective string description of the confining flux tube at finite temperature2104.10486v2 · Michele Caselle2021 · 22 citationsarXiv
A Topic Modeling Analysis of TCGA Breast and Lung Cancer Transcriptomic Data.33339347 · Valle, Filippo, Osella, Matteo, Caselle, Michele2023 · 23 citationsCancers. 2020;12(12)
A Model-Driven Quantitative Analysis of Retrotransposon Distributions in the Human Genome.32986810 · Riba, Andrea, Fumagalli, Maria Rita, Caselle, Michele et al.2021 · 4 citationsGenome biology and evolution. 2020;12(11):2045-2059
A topic modelling analysis of TCGA breast and lung cancer transcriptomic data10.1101/2020.10.19.345694v3 · Valle, F., Osella, M., Caselle, M.2020 · 4 citationsbioRxiv
Genome-wide dynamics of RNA synthesis, processing, and degradation without RNA metabolic labeling.32978246 · Furlan, Mattia, Galeota, Eugenia, Gaudio, Nunzio Del et al.2021 · 42 citationsGenome research. 2020;30(10):1492-1507
Charting the scaling region of the Ising universality class in two and three dimensions2003.12332v4 · Michele Caselle, Marianna Sorba2020 · 9 citationsPhys. Rev. D 102, 014505 (2020)
Career total: 305 works. 208 are in this corpus.Showing the 50 most recent.
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