XJ
Xiaoqian Jiang
cs.LGElectronic Health RecordsPrivacyAlgorithmsComputer Securitycs.AIConfidentialityAlzheimer Diseasecs.CRInformation Dissemination
On Valency
published · living versionsW_2kj9pm5v·v1 · currentpublished
OpenBrain: An Auditable Generated-Label Release for Whole-Brain MRI Parcellation
with Qizhen Lan, Yu-Chun Hsu, Yuxiang Wei, Lijing Zhu +3
1 version
Preprints & journals
354 papers in the corpus · 2011–2026When Evidence Vanishes: Distilling Visual-Evidence Dependency in Medical Vision-Language Models2610.23469v1 · Qizhen Lan, Yiling Ma, Ruiqi Chen et al.2026 · 0 citationsarXiv
MedSTP: Preserving Subspace and Transition Evidence for Medical VQA Token Pruning2610.22751v1 · Mengchen Fan, Qizhen Lan, Xi Xiao et al.2026 · 0 citationsarXiv
Non-medical drivers of health and pediatric no-show prediction: identifying modifiable risk factors.42850362 · Gibson, Ashley, Nguyen, Linh, Yu, Lishan et al.2026 · 0 citationsPediatric research. 2026
BrainTRACE: Tracing Longitudinal, Multimodal, and Volumetric Evidence in Brain MRI Clinical Reasoning2610.06571v1 · Qizhen Lan, Mengchen Fan, Hang Zhang et al.2026 · 0 citationsarXiv
Octave: Scale-Resolved Evaluation of Spatial Gene Expression Prediction from Histology.42856335 · Wang, Qing, Gu, Sipei, Lan, Qizhen et al.2026 · 0 citationsbioRxiv : the preprint server for biology. 2026
EvoTreeNAD: Genealogy-Guided Evolution for LLM-Driven Neural Architecture Discovery2609.29016v1 · Lishan Yu, Derek Jiu, Qizhen Lan et al.2026 · 0 citationsarXiv
A blinded, prospective benchmark of in silico antibody discovery anchored to experimental affinity and developability.42618805 · Erasmus, M Frank, Bedinger, Daniel, Hopkins, Elizabeth et al.2026 · 0 citationsNature biotechnology. 2026
OntoCodex: a multi-agent biomedical ontology enrichment framework.42552428 · Feng, Jingna, Yu, Yue, Dong, Aaron et al.2026 · 0 citationsnpj health systems. 2026;3(1)
Inference-Time Guided Diffusion for PROTAC Linker Design Balancing Synthetic Accessibility and Geometric-Feasibility10.26434/chemrxiv.15007021/v1 · Yi-Ching Tang, Yasmine Almughrabi, Kyoji Tsuchikama et al.2026 · 0 citationsChemRxiv
SimBinder-IF: structure-aware antibody affinity optimization via efficient preference learning.42498639 · Zhao, Xinyan, Tang, Yi-Ching, Monsia, Rivaaj et al.2026 · 0 citationsBioinformatics (Oxford, England). 2026;42(10)
Scaling Up Formal Representation of Clinical Trial Protocols in Ensemble Logic Using LLMs: A Preliminary Study2607.21307v1 · Yan Huang, Xubing Hao, Xiaojin Li et al.2026 · 0 citationsarXiv
The AI-native health science institution innovation theater vs. structural redesign.42422399 · Zhang, Jiajie, Citardi, Martin J, Jiang, Xiaoqian et al.2026 · 0 citationsnpj health systems. 2026;3:62
Displacement Preserving Relational Distillation for Robust Medical Segmentation2607.04599v1 · Zhicheng Ding, Xinyu Chu, Jung Im Choi et al.2026 · 0 citationsarXiv
From performance to practice: knowledge-distilled segmentator for on-premises clinical workflows.42404351 · Lan, Qizhen, Choi, Aaron, Ma, Jun et al.2026 · 0 citationsnpj health systems. 2026;3:58
Hemodynamic-guided V-A ECMO management for cardiogenic shock: Insight from initial experience from TWEET study (to wean an ECMO trials).42284561 · Nascimbene, Angelo, Tosun, Sinan, Nathan, Sriram et al.2026 · 0 citationsPerfusion. 2026:2676591261458644
RescueGPT: An Automated System for Detecting Adverse Safety Events in Prehospital Emergency Medical Service Notes With a Zero-Shot Approach With Large Language Models: A Proof-of-Concept Study.42253467 · Hsieh, Tina Yi Jin, Eriksson, Carl, Meckler, Garth et al.2026 · 1 citationLearning health systems. 2026;10(Suppl 1):e70088
Detail Consistent Stage-Wise Distillation for Efficient 3D MRI Segmentation2605.26382v1 · Mengchen Fan, Baocheng Geng, Xi Xiao et al.2026 · 0 citationsarXiv
Evaluating LingualAI: a prospective validation of AI-based real-time translation against certified human interpreters.42527511 · Singh, Uday P, Jaimes Garcia, Carlos A, Aisenberg, Gabriel M et al.2026 · 0 citationsnpj health systems. 2026;3(1)
Self-Prompting Small Language Models for Privacy-Sensitive Clinical Information Extraction2605.04221v2 · Yao-Shun Chuang, Tushti Mody, Uday Pratap Singh et al.2026 · 0 citationsarXiv
GlioVision: A Multi-Modal MRI Framework for Non-Invasive Glioma Molecular Biomarkers Prediction.42079095 · Nazir, Anam, Cheema, Muhammad Nadeem, Hsu, Yu-Chun et al.2026 · 0 citationsbioRxiv : the preprint server for biology. 2026
Risk of Alzheimer Dementia After High-Dose vs Standard-Dose Influenza Vaccination.41921123 · Bukhbinder, Avram Samuel, Ling, Yaobin, Jhin, Lauren et al.2026 · 3 citationsNeurology. 2026;106(8):e214782
Privacy-preserving verification of preprocessing in federated learning for genomic data.41907170 · Li, Wenbiao, Halimi, Anisa, Vaidya, Jaideep et al.2026 · 0 citationsJAMIA open. 2026;9(2):ooag040
Explainable drug side effect prediction in central neural system via biologically informed graph neural network.41876492 · Huang, Tongtong, Lin, Ko-Hong, Machado-Vieira, Rodrigo et al.2026 · 0 citationsTranslational psychiatry. 2026;16(1)
Quantifying Memorization and Privacy Risks in Genomic Language Models2603.08913v3 · Alexander Nemecek, Wenbiao Li, Xiaoqian Jiang et al.2026 · 0 citationsarXiv
Usability of a deep learning platform for detecting radiographic bone loss and furcation involvement.41801972 · Lee, Chun-Teh, Kabir, Tanjida, Alsaffar, Alaa et al.2026 · 0 citationsJournal of periodontology. 2026
Information extraction from clinical notes: are we ready to switch to large language models?41533750 · Hu, Yan, Zuo, Xu, Zhou, Yujia et al.2026 · 29 citationsJournal of the American Medical Informatics Association : JAMIA. 2026;33(3):553-562
Ultrasensitive, Low-Input Detection of Avocado Sunblotch Viroid via RPA-CRISPR and Nanopore-Array Single-Bead Fluorescence Readout.41648184 · Xu, Jiayi, Jiang, Xiaoqian, Dashtarzhaneh, Mehdi Kamali et al.2026 · 1 citationbioRxiv : the preprint server for biology. 2026
The influence of bapineuzumab and semagacestat on rapid progressors: A retrospective cohort study.41564814 · Harris, Kristofer, Shyer, Madison, Wang, Dulin et al.2026 · 0 citationsThe journal of prevention of Alzheimer's disease. 2026;13(3):100483
ReCo-KD: Region- and Context-Aware Knowledge Distillation for Efficient 3D Medical Image Segmentation2601.08301v1 · Qizhen Lan, Yu-Chun Hsu, Nida Saddaf Khan et al.2026 · 1 citationarXiv
Secure distributed multiple imputation enables missing data inference for private data proprietors.41513815 · Smajlović, Haris, Lian, Yi, Long, Qi et al.2026 · 1 citationNPJ digital medicine. 2026;9(1):88
Governance-Aware AI Workflow Infrastructure for Secure and Policy-Compliant Healthcare Analytics.42713390 · Ali, Shazer, Ali Hassan, Muhammad, Ahmad, Huzaifa et al.2026 · 1 citationIEEE open journal of the Computer Society. 2026;7:1377-1388
Structure-Aware Antibody Design with Affinity-Optimized Inverse Folding2512.17815v1 · Xinyan Zhao, Yi-Ching Tang, Rivaaj Monsia et al.2025 · 0 citationsarXiv
A medically grounded LLM agent-based tool to detect patient safety events in medical records: Identifying patient safety events with large language models.41445638 · Trujillo, Diego, Wang, Dulin, Bahr, Nathan et al.2026 · 3 citationsmedRxiv : the preprint server for health sciences. 2025
Biomedical data repositories require governance for artificial intelligence/machine learning applications at every step.41334246 · Clayton, Ellen Wright, Rose, Susannah, Nebecker, Camille et al.2025 · 2 citationsJAMIA open. 2025;8(6):ooaf134
Multi agent large language models for biomedical hypothesis generation in drug combination discovery.41362614 · Xu, Qidi, Soto, Claudio, Shahnawaz, Mohammad et al.2025 · 7 citationsiScience. 2025;28(12):113984
FusionDP: Foundation Model-Assisted Differentially Private Learning for Partially Sensitive Features2511.03806v1 · Linghui Zeng, Ruixuan Liu, Atiquer Rahman Sarkar et al.2025 · 0 citationsarXiv
DictPFL: Efficient and Private Federated Learning on Encrypted Gradients2510.21086v1 · Jiaqi Xue, Mayank Kumar, Yuzhang Shang et al.2025 · 1 citationarXiv
A Bayesian deep segmentation framework for glioblastoma tumor segmentation using follow-up MRIs.41210079 · Kabir, Tanjida, Hsieh, Kang-Lin, Nunez, Luis et al.2025 · 3 citationsFrontiers in neuroimaging. 2025;4:1630245
Ethical sourcing in the context of health data supply chain management: a value sensitive design approach.41127255 · Nebeker, Camille, Bélisle-Pipon, Jean Christophe, Collins, Benjamin X et al.2025 · 7 citationsJAMIA open. 2025;8(5):ooaf101
Introducing mCODEGPT as a zero-shot information extraction from clinical free text data tool for cancer research.41093969 · Zhang, Kai, Huang, Tongtong, Malin, Bradley A et al.2025 · 9 citationsCommunications medicine. 2025;5(1):422
Empowering Clinical Trial Design through AI: A Randomized Evaluation of PowerGPT2509.12471v1 · Yiwen Lu, Lu Li, Dazheng Zhang et al.2025 · 0 citationsarXiv
BrainGeneBot: a framework for variant prioritization and generative pretrained transformer-informed interpretation across polygenic risk score studies.41148224 · Qu, Gang, Enduru, Nitesh, Liu, Xinyi et al.2025 · 1 citationBriefings in bioinformatics. 2025;26(5)
Evaluating the Efficacy of Large Language Models in Addressing Patient-Centric Inquiries in Multiple Cancers10.1101/2025.08.05.25332968v1 · Borhani, S., Jiang, X.2025 · 0 citationsmedRxiv
Discover important donor-recipient risk factors and interactions in heart transplant primary graft dysfunction with machine learning.40290063 · Ding, Sirui, Liang, Yafen, Chang, Chia-Yuan et al.2025 · 2 citationsJournal of the American Medical Informatics Association : JAMIA. 2025;32(7):1101-1109
CDEMapper: enhancing National Institutes of Health common data element use with large language models.40332956 · Wang, Yan, Huang, Jimin, He, Huan et al.2025 · 3 citationsJournal of the American Medical Informatics Association : JAMIA. 2025;32(7):1130-1139
Cross-institutional dental electronic health record entity extraction via generative artificial intelligence and synthetic notes.40584736 · Chuang, Yao-Shun, Lee, Chun-Teh, Lin, Guo-Hao et al.2025 · 14 citationsJAMIA open. 2025;8(3):ooaf061
FairAlloc: Learning Fair Organ Allocation Policy for Liver Transplant.41230243 · Ding, Sirui, Zha, Daochen, Zhang, Kai et al.2025 · 2 citationsJournal of healthcare informatics research. 2025;9(4):703-719
Computerized diagnostic decision support systems-Isabel Pro versus ChatGPT-4 part II.40524839 · Bridges, Joe M, Jiang, Xiaoqian, Ige, Michael et al.2025 · 0 citationsJAMIA open. 2025;8(3):ooaf048
Unraveling Complex Temporal Patterns in EHRs via Robust Irregular Tensor Factorization.40502241 · Yifei, Ren, Zeng, Linghui, Lou, Jian et al.2026 · 0 citationsAMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science. 2025;2025:451-460
Not Fully Synthetic: LLM-based Hybrid Approaches Towards Privacy-Preserving Clinical Note Sharing.40502247 · Rahman Sarkar, Atiquer, Chuang, Yao-Shun, Jiang, Xiaoqian et al.2026 · 0 citationsAMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science. 2025;2025:441-450
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