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When Forgotten Facts Return: Relearning-Aware Unlearning of Knowledge Graph Embeddings via Tangent Kernels

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Abstract

Approximate unlearning answers a deletion request on a knowledge-graph embedding by editing entity embeddings instead of retraining from scratch. These embeddings keep being updated as new facts arrive. Under this ordinary continued training, forgotten facts recover more than in the exact-unlearning baseline, a model retrained without them and given the same continued training. We trace this relearning to entity embeddings shared by forgotten and new facts. To our knowledge, this is the first study of relearning in knowledge-graph embeddings. Relearning-robust methods developed for deep networks do not account for the graph structure underlying this recovery. We propose Kernel-Anticipated Unlearning (KAU), which uses the tangent kernel to model how continued training changes forgotten facts' scores through these shared parameters. KAU expresses this first-order response in closed form and differentiates through it inside the forgetting loss. The objective steers edits toward directions that continued training reverses less. We compare KAU with state-of-the-art knowledge-graph unlearners and relearning-robust methods under identical continued training, measuring leakage beyond the exact-unlearning baseline. Across three backbones, KAU reduces the strongest knowledge-graph unlearner's leakage by 46-63% on FB15k-237 and 50-82% on CoDEx-L, at higher retained utility.

Introduction

Once a fact has been deleted from a knowledge-graph embedding, does it stay deleted? Such embeddings rank facts, many of them about real people, for search, recommendation and question answering. When a person requests erasure or a curator retracts a false fact, the released model must stop ranking the deleted facts highly while still ranking the rest as a model retrained without them would. Retraining at every request is impractical, so knowledge-graph unlearners edit the released model instead (Liu et al., 2026; Xiao et al., 2025a;b; Xu et al., 2025). Evaluation usually stops at release, although the embeddings keep changing as the graph grows.

As new facts arrive, users keep training their embeddings on old and new true edges ([38]). We call this continued training the update. The update is ordinary use: it contains no forgotten fact and requires no adversary, yet it can undo unlearning. This failure, known as benign relearning, has been observed in language and vision models ([28, 41, 72, 68, 49]). In a knowledge graph, the same entity embeddings must support new learning and preserve the deletion.

Measuring this failure in a knowledge graph requires a reference that itself moves. A language model retrained without facts about fictitious authors regains none under benign fine-tuning ([72]). Facts in a graph, however, predict one another ([61]), so a model retrained without the forgotten facts partly recovers them by re-inferring them from the remaining graph. Only recovery beyond that can count as a failure to forget, so, following Siddiqui et al. [49], we give this retrained oracle the identical update and measure the released model’s gain in forget-set mean reciprocal rank (MRR) beyond the oracle’s own ([14]). We call this leakage.

Measured this way, two recent knowledge-graph unlearners, GraphDPO (Liu et al., [39]) and ZeroFisher (Xiao et al., [64]), leak on every tested graph and backbone. At release, GraphDPO on FB15k-237 with TransE ranks the forgotten facts nearly as low as the retrained oracle. Yet under the update it regains, beyond the oracle, about as much as it removed (Figure 2).

Forget-set MRR along one update

Figure 2. Forget-set MRR along one update on FB15k-237 with TransE. GraphDPO and ZeroFisher relearn far beyond the oracle; KAU stays closest.

What carries the return? Not the relation rows, which every edge of a relation shares, but the entity rows that the forgotten facts share with the update’s edges (Appendix § 10.§ 4). To forget a fact, an unlearner moves its endpoints’ rows, which also raises the loss of true edges at those entities. The update repairs those edges by moving the rows back, and the forgotten fact returns with them. The retrained oracle re-infers through the same rows but has no edit to undo. If this repair undoes forgetting, each fact must be forgotten where the update will leave its rows, not only where they sit at release. Existing relearning-robust methods simulate the update, penalize a proxy, or confine the edit to a subspace ([55, 19, 37, 17, 49, 21, 9, 65]), but none writes in closed form how the update’s edges move a forgotten fact.

A knowledge-graph embedding makes this tractable. A fact’s score gradient touches only its three rows, so the tangent kernel (Jacot et al., [31]), which couples two facts’ scores to first order, is explicit and sparse. The update’s linearized response has a closed form, known from continual-learning theory (Doan et al., [15]; Bennani et al., [3]) and used by Golatkar et al. [21] for a forgetting edit. We propose Kernel-Anticipated Unlearning (KAU), which minimizes an anticipated loss, the forgetting loss evaluated after this response (Figure 1). A score-preservation term keeps the retained facts near their pre-edit scores, leaving the update little to repair. In a linearized model where the update repairs every edge that it edited, the update multiplies the edit by a survival filter (§ 4.6). The filter keeps little of each direction that strongly moves the scores of the update’s edges, more of weaker ones, and all others. KAU’s anticipated loss is then the plain forgetting loss on the surviving edit, so its gradient favors directions the update restores least. On both FB15k-237 (Toutanova and Chen, [56]) and CoDEx-L (Safavi and Koutra, [46]), with each of TransE, TransH and RotatE (Bordes et al., [4]; Wang et al., [60]; Sun et al., [53]), KAU leaks less than either unlearner and ranks the retained facts higher (Table 1). Our main contributions are:

KAU's objective

Figure 1. KAU’s objective (§ 4). The loss acts on each forgotten fact ff’s score after a closed-form response Δθ\Delta\theta to a drawn edge set, pushing it to a target tft_f. Its gradient flows through Δθ\Delta\theta to the edited rows θ\theta.

TransETransHRotatE
MethodExRec↓Leak↓RER↓MRRMRR↑ExRec↓Leak↓RER↓MRRMRR↑ExRec↓Leak↓RER↓MRRMRR↑
FB15k-237GraphDPO101.40.04476.10.2673.70.039134.20.2478.30.06462.70.25
ZeroFisher140.00.074129.00.23124.30.069234.00.22124.30.08683.80.23
KAU48.50.02237.50.286.60.02172.00.2623.80.02423.40.33
Reduction (%)52.150.850.8–91.146.446.4–69.662.762.7–
CoDEx-LGraphDPO77.30.05231.30.2275.50.06239.40.21108.70.10053.70.20
ZeroFisher132.00.10864.50.17135.00.14491.30.15147.60.13371.30.17
KAU26.90.02112.80.2527.10.03119.70.2524.90.0189.60.31
Reduction (%)65.259.159.1–64.150.150.1–77.182.182.1–

Table 1. Relearning on FB15k-237 and CoDEx-L, with each method at its highest-leakage update configuration and peak-leakage epoch (§ 5.2). Means over seven unlearning seeds. Bold marks the best result, and Reduction is KAU’s relative reduction from the better baseline.

  1. Forgotten facts return under the update. We provide, to our knowledge, the first evidence that deletions by knowledge-graph unlearners do not last under ordinary continued training. We find that the forgotten facts return beyond what a retrained model recovers, through the representations of the entities they share with the training edges.

  1. A kernel-based framework for persistent unlearning. We introduce KAU, which anticipates how continued training restores forgotten facts through shared entity embeddings. By differentiating through a closed-form tangent-kernel response inside the forgetting objective, KAU optimizes edits for persistence after the update. Our linearized theory shows that the update acts on the edit as a classical spectral filter weighting directions by resistance to reversal, with retained-gradient projection as a limiting case.

  1. Relearning defences on knowledge-graph embeddings. We adapt relearning defences built for deep networks to knowledge-graph embeddings and find that none closes the gap to the retrained oracle, while those added to an existing unlearner leave most of its leakage (§ 5.4 and § 5.5).

Related work

Knowledge-graph unlearning. GraphDPO (Liu et al., [39]) updates the entity and relation tables by preferring reconstructed alternatives over forgotten facts and replaying adjacent retained edges. ZeroFisher (Xiao et al., [64]) applies a Fisher-based influence update to the rows of the forgotten facts’ local neighbours. Schema (Xiao et al., [63]) re-embeds the deleted entities’ neighbourhood, and MetaEU (Xu et al., [66]) regenerates the forgotten entities’ rows from their relations and neighbours. Like graph neural network unlearners ([11, 62, 12]), all four use graph structure as edit scope or a term preserving neighbours. None computes how training on those neighbours changes a forgotten fact’s score or has been evaluated for recovery under continued training. KAU edits only the entity rows at the forgotten facts’ endpoints, and its loss also acts on each fact’s score after a closed-form response to the update.

Relearning-robust methods. These methods were built for deep networks, where linking a training example to the parameters it moves is neither explicit nor cheap. Unrolled methods evaluate the forgetting loss after a simulated update ([19, 55, 51]). Proxy methods replace the update by a cheaper quantity: sharpness ([17]), weight distance ([49]) or the weight spectrum ([45]). Subspace methods place the edit off the retained gradients’ span to protect utility ([21, 9, 74]), in slowly restored directions ([65, 52] (Sondej and Yang 2025)), or on weights a retain-only update leaves inert ([10]). In a knowledge graph no row is inert, because forgotten facts share rows with retained neighbours. Subspace methods also estimate their subspaces from retained or forget data, so they miss the update’s never-trained edges. None of these methods writes in closed form how the update’s edges move each forgotten fact. KAU does so to first order, with draws that include stand-ins for never-trained edges (§ 4.1). In the linearized model of § 4.6, retained-span projection and slow-direction methods take the form of hard thresholds of the survival filter, which KAU’s gradient applies softly.

Tangent-kernel response. The tangent kernel (Jacot et al., [31]) describes pretrained models’ fine-tuning (Malladi et al., [42]), expresses interference between consecutive tasks in closed form ([3, 15, 26]) and underlies a scrubbing update ([21]). Unlike these works, KAU places the response to the post-edit update inside its objective and differentiates through it. Appendix E extends this comparison (Table 19).

StudyDomainUpdate modelObject reasoned aboutCouplingData effectReferenceMatchedCost
Relearning-robust unlearning methods
TAR [55]LLMforget-set, on forget, retain and mixed corpora, adaptive only by adding fine-tunes that broke earlier versionsweights and residual-stream activations, entropy of one fixed forget batch along a simulated multi-step trajectoryno, retain loss at the weights before the simulated fine-tunepartial, simulated, one fixed batch, straight-through gradientnononea simulated fine-tune per outer step, multi-GPU
Meta-unlearning [19]diffusionforget-set, on forget images, benign set as test only, not adaptiveweights, two whole-set gradients, a few unrolled inner stepspartial, one inner product of whole-set gradientspartial, forget-data fine-tune, unrollednononesecond-order autodiff through the inner steps
ResAlign [37]diffusionforget-set, sampled fine-tunes on a benign and harmful pool, benign at test, two adaptive attacksweights, harmful loss at a simulated end point, implicit proximal Jacobianno, retain as distillation at the current weightspartial, simulated, mean harmful loss at the end pointnononethree simulated fine-tunes per outer step, about one GPU hour in total
MUDMAN [51]LLMforget-set, on the forget set, fixed rate, not adaptiveper-parameter gradients, retain momentum, a forked copypartial, per-coordinate sign agreementpartial, first-order, interleaved fine-tune on the forget setno, unedited model after the same relearningnoneseveral passes per loop, hours of search
CIR (Sondej and Yang, 2025)LLMforget-set, long fine-tune on most of the forget set, not adaptiveprincipal components of forget-set activations and gradientsno, retain step optionalno, a hypothesis that broken representations are repairednononeseconds per fact
RepSelect [52]LLMforget-set, held-out same-domain data, an adaptive variant is testedsingular vectors of the accumulated forget-set gradient after a LoRA fine-tuneno, needs no retain setpartial, LoRA fine-tune on the forget set plus a proportionality assumptionno, base modelnoneminutes per run, no search
SAM [17]LLMforget-set, few forget samples, benign in one figure, not adaptiveweight vector, forget-loss gradient and Hessian inside a norm ballno, additive retain loss at the unperturbed weightsno, the perturbation is the unlearner’s own forget gradientnononeabout twice the base cost
ILU [58]LLMforget-set, benign, downstream tasks to convergence, forget relearning secondary, not adaptiveweight vector, one stationarity scalar per environmentno, additive termsno, data enter through one scalarnononeseveral times the base cost, needs an auxiliary set
Siddiqui et al. [49]visionbenign, retain-only, one rate, not adaptivewhole weight vector, distance and loss barrierno, norms are direction-blindnoyesyes, and the reference does not movelong unlearning runs
Rosati et al. [45]LLM, diffusionforget-set and adaptive, rate sweeps, second-order optimizers, layer insertion, no benignweight-matrix spectrum, global over all datanono, data-blindnononeseconds
MCU [65]LLMforget-set, on most of the forget set, adaptive representation-matching variant, no benignprincipal components of forget-set representations, isotropic kernel assumedno, retain enters only the host’s norm penaltyno, shared eigenstructure assumedno, original modelnoneone randomized SVD, rank chosen by full relearning runs
FRAG and FRP [10]LLMbenign retain-only by default, also forget-only and mixed, rate, optimizer and epoch sweeps, not adaptiveper-weight importances from forget-to-retain channel activation ratiospartial, channel-support ratio, no relation among examplespartial, which channels the retain data activate, not how far outputs moveyes, retain-trained, identical fine-tunedyes, but the ranked metric is the method’s own score changeseconds to minutes, no training
StudyDomainUpdate modelObject reasoned aboutCouplingData effectReferenceMatchedCost
UNDO [36]LLMforget-set, forget-set relearning, worst case overrates, not adaptiveweights and output distributions, noise and distillationnonoyesyes, under forget-set relearninga large fraction of retraining compute
Yoon et al. [72]LLMbenign, topical and syntactic relearn sets, not adaptivedataset-mean hidden states and gradients, as a diagnosticpartial, aggregate alignment, post hocnoyes, as a benignness checkyes, to certify benignness onlyone paraphrase pass
Retained-span projection and its origin
Golatkar et al. [21]vision, small subsetsrelearning time on the complete data, forget set included, no benignsample-gradient tangent kernel, projector off the retain span, Fisher noiseyes, pairwise kernel, used to compute the editno, analysis stops at releaseyesyes, under relearning on the complete datamemory quadratic in the retained set
UNSC [9]visionnone, no fine-tune after releaseper-layer retained activation spans per class, projector fixed at the original weightspartial, class activation spannoyes, at releasenoone SVD per layer per class
GU [74]LLMnone, no relearning runretain-gradient span in the Adam metricpartial, one-step entanglement normnononosmall overhead
GPM [47]continual learningnone, GPM is itself the later optimizerper-layer activation bases of past taskspartial, span of old inputsnononoone SVD per layer per task
Adam-NSCL [59]continual learningnone, Adam-NSCL is itself the later optimizernull space of per-layer feature covariancepartial, covariance span of old featuresnononoone SVD per layer per task
Unlearners for graphs
GraphDPO [39]KGEnoneentity and relation rows, one-hop boundary replay, pointwise distillation to a frozen originalpartial, boundary replaynoyes, at releasenofaster than fine-tuning, frozen copy doubles memory
ZeroFisher [64]KGEnoneFisher curvature of the full loss, kk-hop restrictionpartial, implicit through the Fishernoyes, at releasenoiterations tuned from 3 to 1,550 (Appendix C.2)
Schema [63]KGEnonepairwise difference alignment in the two-hop neighbourhood to a schema-matched subgraphpartial, pairwise geometry, no forget-score termnoyes, at releasenominutes
MetaEU [66]KGEnoneembeddings generated from relations and neighbours, loss maximization on forget queriesnonoyes, at releasenonot reported
GNNDelete [11]GNNnonelayer-wise node representations on the kk-hop subgraph, a deletion operatorpartial, neighbourhood-influence termnoyes, at releasenomuch faster than retraining
GIF [62]GNNnoneHessian of the full loss, neighbour loss change within kk hopsyes, neighbour loss term, aimed at the retraining optimumnoyes, at releasenoabout a second per request
Projector [12]linear GNNbenign fine-tune, as a utility check onlyweight vector in the feature span, projection off deleted featuresno, node dependencies folded into scalarsnoyes, at releaseno, the retrained model is not fine-tunedwell under a second
KAU (this paper)KGEbenign, 48 update configurations shared by every method, the strongest against each method chosen on a held-out selection half, not adaptiveblock-sparse tangent kernel over triples, per-fact closed-form response, score at the shifted rowsyes, per-fact kernel blocks over shared rowsyes, the linearized response to a fresh draw each stepyesyesone linear solve per step, 13 s per release on CoDEx-L

Table 19. Relearning-robust unlearning methods, retained-span projection methods and unlearners for graphs, by what their objective reasons about and how they are evaluated. Update model: the update the study resists or measures, benign (no forgotten item in it) or forget-set (forgotten items in it), and whether it adapts to the method. Coupling: whether the objective relates retained to forgotten data, and through what. Data effect: whether the objective computes what training on the update’s data does to the forgotten items. Reference: whether a retrained model is the reference. Matched: whether the unlearned and the retrained model receive the same fine-tune.

Problem formulation

Knowledge-graph embeddings. A knowledge graph is a set of triples x=(h,r,t)x = (h,r,t) over entities V\mathcal{V} and relations R\mathcal{R}. An embedding model stores an entity row ev∈Rm\mathbf{e}_v \in\mathbb{R}^{m} for every v∈Vv \in\mathcal{V} and a relation row wr\mathbf{w}_r for every r∈Rr \in\mathcal{R}, and scores a triple from its three rows by a function dx(θ)d_x(\theta) that is low when the triple is believed. Link prediction ranks candidate triples by that score. TransE scores dx(θ)=∥eh+wr−et∥1d_x(\theta) = \lVert\mathbf{e}_h + \mathbf{w}_r - \mathbf{e}_t \rVert_1 with eˉ=e/∥e∥2\bar{\mathbf{e}} = \mathbf{e}/\lVert\mathbf{e} \rVert_2 (Bordes et al., [4]). RotatE (Sun et al., [53]) and TransH (Wang et al., [60]) are given in Appendix § 8.8. The score function and its row parameterization define a backbone. Each backbone is trained with a margin-ranking loss over random corruptions of each triple (Table 3), with margin γ\gamma, and we write relu⁡(a)=[a]+=max⁡{a,0}\operatorname{relu}(a) = [a]_+ = \max\{a,0\}.

Models
BackbonesTransE, RotatE, TransH at 200 latent coordinates, Appendix § 8.8
Trainingmargin ranking with Adam [34], loss [dx(θ)−nˉx+γ]+[d_x(\theta)-\bar{n}_x+\gamma]_+ with nˉx\bar{n}_x the mean score of K=10K=10 random corruptions of xx and margin γ=8\gamma=8 (§ 3)
Original and retrained modelsone training run each per graph and backbone with that recipe, the original model on Dtrain∖B\mathcal{D}_{\mathrm{train}}\setminus B, with BB the never-trained set of § 5, and the retrained model on DR\mathcal{D}_{R} alone, never visible to the unlearner. Table 9 adds two further retrained models on FB15k-237, at retraining seeds 2 and 3
Update class assumed by the unlearner
Known channeleach retained edge at vv with probability ρkn=0.2\rho_{\mathrm{kn}}=0.2
Unseen channel32 stand-ins per entity, best of four by plausibility under θ∘\theta^\circ, refreshed every 5 epochs, each entering with probability min⁡{1,ρundeg⁡(v)/32}\min\{1,\rho_{\mathrm{un}}\deg(v)/32\}, ρun=0.05\rho_{\mathrm{un}}=0.05
Cap and drawat most kmax⁡=96k_{\max}=96 edges per entity, one fresh draw per forgetting step
Response, evaluation, composition
Residualri=relu⁡(di(θ)−di(θ∘))r_i=\operatorname{relu}(d_i(\theta)-d_i(\theta^\circ)) on every drawn edge
Ridgeσv=σrel⋅mean⁡i∥ϕi(v)∥22\sigma_v=\sigma_{\mathrm{rel}}\cdot\operatorname{mean}_i\lVert\phi_i^{(v)}\rVert_2^2 with σrel=10−3\sigma_{\mathrm{rel}}=10^{-3}
Solve(ΦTΦ+Σ)Δ=−ΦTr(\Phi^{\mathsf{T}}\Phi+\Sigma)\Delta=-\Phi^{\mathsf{T}}r over all involved rows by conjugate gradients [25], features recomputed at the current θ\theta at every step and carrying no gradient
Evaluationdfd_f at the shifted rows through the model’s own score function
Compositiond~f=min⁡{df(θ),df(θ+Δθ)}\tilde{d}_f=\min\{d_f(\theta),d_f(\theta+\Delta\theta)\}, the gradient routed through the anticipated path
Targetstf=df(θ∘)+srelu⁡(qf−df(θ∘))t_f=d_f(\theta^\circ)+s\operatorname{relu}(q_f-d_f(\theta^\circ)), s=0.15s=0.15 by default, selected as 0.15, 0.4 and 0.25 on TransE, TransH and RotatE, qfq_f the 5% quantile of θ∘\theta^\circ’s scores over 128 corrupted copies
Optimization and ancillaries
Trainable rowsthe entity rows of VF\mathcal{V}_F, 11,412 of 14,541 on FB, relations frozen, released model fully trainable
Forgetting pass2 steps per epoch, at Adam learning rate 3×10−53\times10^{-5} on TransE and TransH and 3×10−43\times10^{-4} on RotatE, following its score scale, for 20, 10 and 10 epochs on TransE, TransH and RotatE (Appendix § 9.§ 2)
Retained passmargin loss and score preservation over retained edges incident to VF\mathcal{V}_F, Adam learning rate 10−410^{-4}, once per epoch. The score-preservation term has weight β=1\beta=1, the anchor weight of Appendix § 9.§ 2, and 0.3 in the ablation tables of § 5. It is taken over 4096 of those edges, resampled at every step
Retractionevery edited row rescaled to its original length after every step
Selection0.7(1−MRRFR)+0.3MRRR0.7(1-\mathrm{MRRF}_{R})+0.3\mathrm{MRR}_{R} on the development subsets the unlearner holds, once per epoch over the run
Update, and the published baselines
Updateevery parameter trainable, margin loss, Adam, on retained edges and never-trained edges, over the 48 update configurations of § 5, shared by every method and by the oracle
GraphDPO [39]the authors’ implementation, under the same hyperparameter-selection criterion as KAU (Appendix § 9.§ 2). It is tuned over its own ranges of Appendix § 9.§ 2 and updates both the entity table and the relation table. Its feasible set therefore contains that of KAU, which edits only the involved entity rows under the restriction defined in § 3
ZeroFisher [64]the authors’ implementation, tuned over its perturbation scale, update scale, number of iterations, and on RotatE, damping, under the same criterion. It edits the rows of the local neighbours of the forgotten edges (§ 2)

Table 3. Hyperparameters on FB15k-237 (FB). The CoDEx-L settings are selected by the same rule (Appendix § 9.§ 2) and listed in Appendix § 9.§ 4.

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